BLASTX 7.6.2
Query= RU03192 /QuerySize=1186
(1185 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G72370.1 | Symbols: P40, AP40, RP40, RPSAA | P... 382 3e-106
TAIR9_protein||AT1G72370.2 | Symbols: P40, AP40, RP40, RPSAA | P... 382 3e-106
TAIR9_protein||AT3G04770.2 | Symbols: RPSAb | RPSAb (40S ribosom... 381 6e-106
TAIR9_protein||AT3G04770.1 | Symbols: RPSAb | RPSAb (40S ribosom... 361 5e-100
>TAIR9_protein||AT1G72370.1 | Symbols: P40, AP40, RP40, RPSAA | P40; structural
constituent of ribosome | chr1:27243148-27244842 REVERSE
Length = 299
Score = 382 bits (980), Expect = 3e-106
Identities = 190/237 (80%), Positives = 203/237 (85%), Gaps = 6/237 (2%)
Frame = +2
Query: 113 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV 292
QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV
Sbjct: 11 QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70
Query: 293 AIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQLQTSFNEPRLLILTD 472
AIENP+DIIVQSARPYGQRAVLKFAQ+TGANAIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71 AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130
Query: 473 PRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 652
PRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190
Query: 653 GSVRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXXXXY-----IEYSGGLGGDQWPT 808
G++ G KWDVMVDLFFYR Y EY G +GGDQW T
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEY-GMVGGDQWTT 246
>TAIR9_protein||AT1G72370.2 | Symbols: P40, AP40, RP40, RPSAA | P40; structural
constituent of ribosome | chr1:27243148-27244842 REVERSE
Length = 295
Score = 382 bits (980), Expect = 3e-106
Identities = 190/237 (80%), Positives = 203/237 (85%), Gaps = 6/237 (2%)
Frame = +2
Query: 113 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV 292
QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV
Sbjct: 11 QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70
Query: 293 AIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQLQTSFNEPRLLILTD 472
AIENP+DIIVQSARPYGQRAVLKFAQ+TGANAIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71 AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130
Query: 473 PRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 652
PRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190
Query: 653 GSVRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXXXXY-----IEYSGGLGGDQWPT 808
G++ G KWDVMVDLFFYR Y EY G +GGDQW T
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEY-GMVGGDQWTT 246
>TAIR9_protein||AT3G04770.2 | Symbols: RPSAb | RPSAb (40S ribosomal protein SA
B); structural constituent of ribosome | chr3:1309544-1310846 REVERSE
Length = 281
Score = 381 bits (977), Expect = 6e-106
Identities = 186/233 (79%), Positives = 202/233 (86%), Gaps = 4/233 (1%)
Frame = +2
Query: 110 RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVI 289
RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVI
Sbjct: 11 RQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVI 70
Query: 290 VAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQLQTSFNEPRLLILT 469
VAIENPKDIIVQSARPYGQRAVLKFAQ+TG NAIAGRHTPGTFTNQ+QTSF+EPRLLILT
Sbjct: 71 VAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILT 130
Query: 470 DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 649
DPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQM
Sbjct: 131 DPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQM 190
Query: 650 RGSVRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXXXXYIEYSGGLGGDQWPT 808
RG++ KWDVMVDLFFYR Y G +GGDQW T
Sbjct: 191 RGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADY----GMVGGDQWTT 239
>TAIR9_protein||AT3G04770.1 | Symbols: RPSAb | RPSAb (40S ribosomal protein SA
B); structural constituent of ribosome | chr3:1309465-1310846 REVERSE
Length = 333
Score = 361 bits (926), Expect = 5e-100
Identities = 172/195 (88%), Positives = 188/195 (96%)
Frame = +2
Query: 110 RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVI 289
RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVI
Sbjct: 11 RQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVI 70
Query: 290 VAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQLQTSFNEPRLLILT 469
VAIENPKDIIVQSARPYGQRAVLKFAQ+TG NAIAGRHTPGTFTNQ+QTSF+EPRLLILT
Sbjct: 71 VAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILT 130
Query: 470 DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 649
DPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQM
Sbjct: 131 DPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQM 190
Query: 650 RGSVRPGHKWDVMVD 694
RG++ KWDVMV+
Sbjct: 191 RGTILAAQKWDVMVN 205
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 922,250,500
Number of Sequences: 33410
Number of Extensions: 922250500
Number of Successful Extensions: 51428098
Number of sequences better than 0.0: 0
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