BLASTX 7.6.2
Query= RU03209 /QuerySize=1316
(1315 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G05780.1 | Symbols: RPN8A, AE3, ATHMOV34 | RPN... 549 2e-156
TAIR9_protein||AT3G11270.1 | Symbols: MEE34 | MEE34 (maternal ef... 545 4e-155
TAIR9_protein||AT2G39990.1 | Symbols: EIF2 | EIF2; translation i... 114 1e-025
TAIR9_protein||AT4G26430.1 | Symbols: CSN6B | CSN6B | chr4:13355... 93 3e-019
TAIR9_protein||AT5G56280.1 | Symbols: CSN6A | CSN6A | chr5:22783... 88 9e-018
>TAIR9_protein||AT5G05780.1 | Symbols: RPN8A, AE3, ATHMOV34 | RPN8A (RP
NON-ATPASE SUBUNIT 8A) | chr5:1735862-1738176 FORWARD
Length = 309
Score = 549 bits (1413), Expect = 2e-156
Identities = 277/308 (89%), Positives = 292/308 (94%)
Frame = +1
Query: 94 MDVIKTQQISARPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNS 273
MDVIKTQQISAR IEKV+VHPLVLLSIVD+YNRVAKD+ KRVVGVLLGSS RG VDV+NS
Sbjct: 1 MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60
Query: 274 YAVPFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFT 453
YAVPFEEDDKDPSIWFLDHNYHE+M+ M KRINAKEHVVGWYSTGPKLRENDLDVH+LF
Sbjct: 61 YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFN 120
Query: 454 DYVPNPVLVIIDVQPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 633
YVPNPVLVIIDVQPKELGIPTKAY AVEEVKENATQKSQKVFVHV +EIAAHEVEEIGV
Sbjct: 121 GYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGV 180
Query: 634 EHLLRDVKDTTISTLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQD 813
EHLLRDVKDTTISTLATEVT KLTALKGLDARLREIRSYLDLVI+ KLPLNHEILYHLQD
Sbjct: 181 EHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQD 240
Query: 814 VFNLLPNLNVSELIKGFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAEDSK 993
VFNLLPNLNV+EL+K F+VKTNDMMLVIYLSSLIRSVIALHNLINNK+ NKEHEKAEDSK
Sbjct: 241 VFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKLLNKEHEKAEDSK 300
Query: 994 QVAVPAAA 1017
VA+PA +
Sbjct: 301 PVAIPATS 308
>TAIR9_protein||AT3G11270.1 | Symbols: MEE34 | MEE34 (maternal effect embryo
arrest 34) | chr3:3528989-3531317 FORWARD
Length = 311
Score = 545 bits (1402), Expect = 4e-155
Identities = 275/305 (90%), Positives = 290/305 (95%)
Frame = +1
Query: 94 MDVIKTQQISARPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNS 273
MDVIKTQQISAR IEKVIVHPLVLLSIVD+YNRVAKDT KRVVGVLLGSS RGTVDV+NS
Sbjct: 1 MDVIKTQQISARTIEKVIVHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSSSRGTVDVTNS 60
Query: 274 YAVPFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFT 453
YAVPFEEDDKD SIWFLDHNYHE+M+ M KRINAKEH+VGWYSTGPKLRENDLDVH+LF
Sbjct: 61 YAVPFEEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFN 120
Query: 454 DYVPNPVLVIIDVQPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 633
YVPNPVLVIIDVQPKELGIPTKAY AVEEVKENATQKSQ+VFVHVP+EIAAHEVEEIGV
Sbjct: 121 GYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGV 180
Query: 634 EHLLRDVKDTTISTLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQD 813
EHLLRDVKDTTISTLATEVT KLTALKGLDARLREIR+YLDLVI+ KLPLNHEILYHLQD
Sbjct: 181 EHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQD 240
Query: 814 VFNLLPNLNVSELIKGFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAEDSK 993
VFNLLPNLNV+EL+K FAVKTNDMMLVIYLSSLIRSVIALH+LINNK+ NKEHEKAEDSK
Sbjct: 241 VFNLLPNLNVNELVKAFAVKTNDMMLVIYLSSLIRSVIALHSLINNKLLNKEHEKAEDSK 300
Query: 994 QVAVP 1008
V +P
Sbjct: 301 PVDIP 305
>TAIR9_protein||AT2G39990.1 | Symbols: EIF2 | EIF2; translation initiation
factor | chr2:16698332-16699929 REVERSE
Length = 294
Score = 114 bits (285), Expect = 1e-025
Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 17/271 (6%)
Frame = +1
Query: 148 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSY-RGTVDVSNSYAVPFEEDDKDPSIWFL 324
+HPLV+ ++ D + R D+ +RV+G LLGS GTVD+ NSYAVP E ++
Sbjct: 30 IHPLVIFNVCDCFVR-RPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV--- 85
Query: 325 DHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPKE 504
D +YH M + ++N+KE +VGWYSTG + +H + VPNP+ + +D
Sbjct: 86 DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTN 145
Query: 505 LGIPTKAYCAVEEVKENATQKSQKVFVH---VPSEIAAHEVEEIGVEHLLRDVKDTTIST 675
KA+ V N + +++ H +P ++ + E +G + L K T++
Sbjct: 146 GEGTIKAF-----VSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVL----KATSVDK 196
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELI 855
L ++ G ++ L + ++ Y+D V+ ++ ++ I + D LP L
Sbjct: 197 LPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKLPPQVFD 256
Query: 856 KGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
D +L++YLSS+ R+ ++L +N
Sbjct: 257 NLVNDSLQDQLLLLYLSSITRTQLSLAEKLN 287
>TAIR9_protein||AT4G26430.1 | Symbols: CSN6B | CSN6B | chr4:13355229-13357326
FORWARD
Length = 318
Score = 93 bits (230), Expect = 3e-019
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 13/250 (5%)
Frame = +1
Query: 214 RVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVG 393
RV G ++G TV++ NS+ + F DP++ LD ++ E + K++ +V+G
Sbjct: 57 RVYGCVIGLQRGRTVEIFNSFELIF-----DPALDTLDRSFLEKKQELYKKVFPDFYVLG 111
Query: 394 WYSTGPKLRENDLDVHSLFTDYVPNPVLVIID--VQPKELGIPTKAYCAVEEVKENATQK 567
WYSTG E+D+ +H D +PV V+++ + + +P Y + V +
Sbjct: 112 WYSTGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGI--- 168
Query: 568 SQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LATEVTGKLTALKGLDARLRE 738
Q +FVH I E E I V+H+ L+ + +T LA +TG +A+K L++R+R
Sbjct: 169 PQSIFVHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRV 228
Query: 739 IRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELIKGFAVKTNDMMLVIYLSSLIR 918
+ ++ + P + +L + + LP + + F ++ ND +L+ YL+ +
Sbjct: 229 LYQHIVAMQKGDKPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMITN 288
Query: 919 SVIALHNLIN 948
++ +++
Sbjct: 289 CTSNMNEVVD 298
>TAIR9_protein||AT5G56280.1 | Symbols: CSN6A | CSN6A | chr5:22783617-22785530
REVERSE
Length = 318
Score = 88 bits (217), Expect = 9e-018
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Frame = +1
Query: 214 RVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVG 393
RV G ++G TV++ NS+ + + DPS LD ++ E + K++ +++G
Sbjct: 57 RVYGCVIGVQRGRTVEIFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILG 111
Query: 394 WYSTGPKLRENDLDVHSLFTDYVPNPVLVIID--VQPKELGIPTKAYCAVEEVKENATQK 567
WYSTG E+D+ +H D +PV V+++ + + +P Y + V +
Sbjct: 112 WYSTGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGI--- 168
Query: 568 SQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LATEVTGKLTALKGLDARLRE 738
Q +F H I E E I V+H+ L+ + +T LA +TG +A+K L++R+R
Sbjct: 169 PQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRV 228
Query: 739 IRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELIKGFAVKTNDMMLVIYLSSLIR 918
+ L + ++ +L + + LP + F ++ ND +L+ YL+ +
Sbjct: 229 LYQNLAAMQKGDKSCDNSVLRQVSSLLRRLPAMESERFQDNFLMEYNDKLLITYLAMITN 288
Query: 919 SVIALHNLIN 948
++ +++
Sbjct: 289 CSSNMNEMVD 298
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 922,250,500
Number of Sequences: 33410
Number of Extensions: 922250500
Number of Successful Extensions: 51428098
Number of sequences better than 0.0: 0
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