BLASTX 7.6.2
Query= RU03279 /QuerySize=265
(264 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G19580.1 | Symbols: GAMMA CA1 | GAMMA CA1 (GAM... 118 7e-028
TAIR9_protein||AT5G66510.1 | Symbols: GAMMA CA3 | GAMMA CA3 (GAM... 108 7e-025
TAIR9_protein||AT5G66510.2 | Symbols: GAMMA CA3 | GAMMA CA3 (GAM... 108 7e-025
TAIR9_protein||AT1G47260.1 | Symbols: APFI, GAMMA CA2 | GAMMA CA... 106 3e-024
TAIR9_protein||AT1G47420.1 | Symbols: | FUNCTIONS IN: molecular... 64 2e-011
>TAIR9_protein||AT1G19580.1 | Symbols: GAMMA CA1 | GAMMA CA1 (GAMMA CARBONIC
ANHYDRASE 1); carbonate dehydratase | chr1:6774937-6777092 FORWARD
Length = 276
Score = 118 bits (295), Expect = 7e-028
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +1
Query: 73 MGTLGRAIYTVGFWIRETGQAVDRLGSRLQGSYYFKEQLSRHRTLMNVFDKAPVVDKDAF 252
MGTLGRA Y+VGFWIRETGQA+DRLG RLQG YF+EQLSRHRTLMNVFDKAP+VDK+AF
Sbjct: 1 MGTLGRAFYSVGFWIRETGQALDRLGCRLQGKNYFREQLSRHRTLMNVFDKAPIVDKEAF 60
Query: 253 VAPS 264
VAPS
Sbjct: 61 VAPS 64
>TAIR9_protein||AT5G66510.1 | Symbols: GAMMA CA3 | GAMMA CA3 (GAMMA CARBONIC
ANHYDRASE 3); carbonate dehydratase | chr5:26550016-26551496 REVERSE
Length = 259
Score = 108 bits (269), Expect = 7e-025
Identities = 50/64 (78%), Positives = 57/64 (89%)
Frame = +1
Query: 73 MGTLGRAIYTVGFWIRETGQAVDRLGSRLQGSYYFKEQLSRHRTLMNVFDKAPVVDKDAF 252
MGT+G+A Y+VGFWIRETGQA+DRLG RLQG +F+EQLSRHRTLMNVFDK P VDK AF
Sbjct: 1 MGTMGKAFYSVGFWIRETGQALDRLGCRLQGKNHFREQLSRHRTLMNVFDKTPNVDKGAF 60
Query: 253 VAPS 264
VAP+
Sbjct: 61 VAPN 64
>TAIR9_protein||AT5G66510.2 | Symbols: GAMMA CA3 | GAMMA CA3 (GAMMA CARBONIC
ANHYDRASE 3); carbonate dehydratase | chr5:26550016-26551496 REVERSE
Length = 270
Score = 108 bits (269), Expect = 7e-025
Identities = 50/64 (78%), Positives = 57/64 (89%)
Frame = +1
Query: 73 MGTLGRAIYTVGFWIRETGQAVDRLGSRLQGSYYFKEQLSRHRTLMNVFDKAPVVDKDAF 252
MGT+G+A Y+VGFWIRETGQA+DRLG RLQG +F+EQLSRHRTLMNVFDK P VDK AF
Sbjct: 1 MGTMGKAFYSVGFWIRETGQALDRLGCRLQGKNHFREQLSRHRTLMNVFDKTPNVDKGAF 60
Query: 253 VAPS 264
VAP+
Sbjct: 61 VAPN 64
>TAIR9_protein||AT1G47260.1 | Symbols: APFI, GAMMA CA2 | GAMMA CA2 (GAMMA
CARBONIC ANHYDRASE 2); carbonate dehydratase | chr1:17321384-17323347
REVERSE
Length = 279
Score = 106 bits (264), Expect = 3e-024
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +1
Query: 73 MGTLGRAIYTVGFWIRETGQAVDRLGSRLQGSYYFKEQLSRHRTLMNVFDKAPVVDKDAF 252
MGTLGRAIYTVG WIR TGQA+DR+GS LQGS+ +E LSRHRTLMNVFDK+P+VDKD F
Sbjct: 1 MGTLGRAIYTVGNWIRGTGQALDRVGSLLQGSHRIEEHLSRHRTLMNVFDKSPLVDKDVF 60
Query: 253 VAPS 264
VAPS
Sbjct: 61 VAPS 64
>TAIR9_protein||AT1G47420.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is:
GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase
(TAIR:AT1G47260.1); Has 85 Blast hits to 85 proteins in 16 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:17395774-17397176 REVERSE
Length = 258
Score = 64 bits (153), Expect = 2e-011
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 MGTLGRAIYTVGFWIRETGQAVDRLGSRLQGSYYFKEQLSRHRTLMNVFDKAPVV 237
MGTLGRAI+TVG IR T QA R+GS LQGS++ ++ LSRHRTL+ V A V+
Sbjct: 1 MGTLGRAIHTVGNRIRGTAQAQARVGSLLQGSHHIEKHLSRHRTLITVAPNASVI 55
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 951,858,806
Number of Sequences: 33410
Number of Extensions: 951858806
Number of Successful Extensions: 51489668
Number of sequences better than 0.0: 0
|