BLASTX 7.6.2
Query= RU03310 /QuerySize=656
(655 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76560.1 | Symbols: CP12-3 | CP12-3 | chr1:287... 128 3e-030
TAIR9_protein||AT2G47400.1 | Symbols: CP12-1, CP12 | CP12-1 | ch... 82 2e-016
TAIR9_protein||AT3G62410.1 | Symbols: CP12-2, CP12 | CP12-2; pro... 82 2e-016
>TAIR9_protein||AT1G76560.1 | Symbols: CP12-3 | CP12-3 | chr1:28728285-28728689
FORWARD
Length = 135
Score = 128 bits (321), Expect = 3e-030
Identities = 67/113 (59%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
Frame = +1
Query: 109 VSFARSGLAVRVTNPGGQRKAMRVMAVAKFKGTQMREKRLTEMIEKKVLEAKQVCGEGDL 288
VS + L R T P M A AK+ GT+MRE++L+EMIE+KV EA +VC E +
Sbjct: 24 VSTGSNILRFRETVPRQFSLMMVTKATAKYMGTKMREEKLSEMIEEKVKEATEVC-EAEE 82
Query: 289 ITDECKVAWDEVEEVSQAKADLRLKMK--DSDPLESFCQDNPETDECRIYED* 441
+++EC+VAWDEVEEVSQA+ADLR+K+K + DPLESFCQ+NPETDECRIYED*
Sbjct: 83 MSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFCQENPETDECRIYED* 135
>TAIR9_protein||AT2G47400.1 | Symbols: CP12-1, CP12 | CP12-1 |
chr2:19446889-19447263 FORWARD
Length = 125
Score = 82 bits (202), Expect = 2e-016
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Frame = +1
Query: 169 AMRVMAVAKFKGTQMREKRLTEMIEKKVLEAKQVCGEGDLITDECKVAWDEVEEVSQAKA 348
+M+ M V K E ++E +EK + EAK+ C + D ++ EC AWDEVEE+S A +
Sbjct: 38 SMKRMVVVK----ATSEGEISEKVEKSIQEAKETCAD-DPVSGECVAAWDEVEELSAAAS 92
Query: 349 DLRLKMK--DSDPLESFCQDNPETDECRIYED* 441
R K K SDPLE +C DNPETDECR Y++*
Sbjct: 93 HARDKKKAGGSDPLEEYCNDNPETDECRTYDN* 125
>TAIR9_protein||AT3G62410.1 | Symbols: CP12-2, CP12 | CP12-2; protein binding |
chr3:23091006-23091401 FORWARD
Length = 132
Score = 82 bits (202), Expect = 2e-016
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Frame = +1
Query: 157 GQRKAMRVMAVAKFKGTQMREKRLTEMIEKKVLEAKQVCGEGDLITDECKVAWDEVEEVS 336
G R R+M + K E +++++EK + EA++ C GD ++ EC AWDEVEE+S
Sbjct: 39 GSRTTNRMMKLQPIKAAP--EGGISDVVEKSIKEAQETCA-GDPVSGECVAAWDEVEELS 95
Query: 337 QAKADLRLKMK--DSDPLESFCQDNPETDECRIYED* 441
A + R K K SDPLE +C+DNPET+ECR Y++*
Sbjct: 96 AAASHARDKKKADGSDPLEEYCKDNPETNECRTYDN* 132
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 951,858,806
Number of Sequences: 33410
Number of Extensions: 951858806
Number of Successful Extensions: 51489668
Number of sequences better than 0.0: 0
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