BLASTX 7.6.2
Query= RU03364 /QuerySize=1106
(1105 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03740.1 | Symbols: HD2C, HDT3 | HD2C (HISTONE... 92 4e-019
TAIR9_protein||AT5G22650.1 | Symbols: HD2B, HDT02, HDT2, ATHD2B,... 54 2e-007
TAIR9_protein||AT5G22650.2 | Symbols: HD2B, HDT02, HDT2, ATHD2B,... 53 3e-007
TAIR9_protein||AT3G44750.1 | Symbols: HD2A, ATHD2A, HDA3, HDT1 |... 51 1e-006
>TAIR9_protein||AT5G03740.1 | Symbols: HD2C, HDT3 | HD2C (HISTONE DEACETYLASE
2C); histone deacetylase/ nucleic acid binding / transcription
repressor/ zinc ion binding | chr5:981994-983961 FORWARD
Length = 295
Score = 92 bits (228), Expect = 4e-019
Identities = 53/101 (52%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Frame = -3
Query: 479 KVDGSNKRAAE--SSKTPV-QKKAKFVTPEKTSGKKGAVHTATPYPSKQALKRP--ANTD 315
K + KR+AE SSK P KKAKFVTP+KT KK VH ATP+PSKQA K +T
Sbjct: 193 KPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTG 252
Query: 314 QTKLQSSKSSGGGTFRCDPCNRSFNSDGALQSHTKAKHGAA 192
+T Q G F C C R+F S+ LQSHTKAKH AA
Sbjct: 253 ETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHSAA 293
>TAIR9_protein||AT5G22650.1 | Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 |
HD2B (HISTONE DEACETYLASE 2B); histone deacetylase |
chr5:7534120-7536054 FORWARD
Length = 307
Score = 54 bits (127), Expect = 2e-007
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Frame = -3
Query: 467 SNKRAAES-SKTPVQ-KKAK-----FVTPEKTSGKKGAVHTATPYPSKQALKRPANTDQT 309
+ KR ES SKTPV KKAK TP+KT KK HTATP+P+K+ K P N +Q+
Sbjct: 207 NKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQS 266
Query: 308 KLQSSKSSGG 279
+SSGG
Sbjct: 267 PKSGGQSSGG 276
>TAIR9_protein||AT5G22650.2 | Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 |
HD2B (HISTONE DEACETYLASE 2B); histone deacetylase |
chr5:7534120-7536054 FORWARD
Length = 306
Score = 53 bits (126), Expect = 3e-007
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Frame = -3
Query: 467 SNKRAAES-SKTPVQ-KKAK-----FVTPEKTSGKKGAVHTATPYPSKQALKRPANTDQT 309
+ KR ES SKTPV KKAK TP+KT KKG HTATP+P+K+ K P N +Q+
Sbjct: 207 NKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKGG-HTATPHPAKKGGKSPVNANQS 265
Query: 308 KLQSSKSSGG 279
+SSGG
Sbjct: 266 PKSGGQSSGG 275
>TAIR9_protein||AT3G44750.1 | Symbols: HD2A, ATHD2A, HDA3, HDT1 | HDA3 (HISTONE
DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion
binding | chr3:16298045-16299585 FORWARD
Length = 246
Score = 51 bits (120), Expect = 1e-006
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Frame = -3
Query: 512 NKSDSLTMKLFKVDGSNKRAAE-SSKTPV--QKKAKFVTPEKTSGKKGAVHTATPYPSKQ 342
++SDS M DG + E + K P +K+A TP+ K A TP + +
Sbjct: 141 DESDSDGMDEDDSDGEDSEEEEPTPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDE 200
Query: 341 ALKRPANTDQTKLQSSKSSGGGTFRCDPCNRSFNSDGALQSHTKAKHGAAK* 186
K +Q+ +S+ S C C ++FNS AL+SH KAKH AAK*
Sbjct: 201 KKKGGKAANQSPKSASQVS------CGSCKKTFNSGNALESHNKAKHAAAK* 246
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 951,858,806
Number of Sequences: 33410
Number of Extensions: 951858806
Number of Successful Extensions: 51489668
Number of sequences better than 0.0: 0
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