BLASTX 7.6.2
Query= RU03465 /QuerySize=484
(483 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G20550.1 | Symbols: DDL | DDL (DAWDLE) | chr3:... 183 6e-047
TAIR9_protein||AT2G24410.1 | Symbols: | FUNCTIONS IN: molecular... 83 6e-017
TAIR9_protein||AT5G38840.1 | Symbols: | forkhead-associated dom... 49 2e-006
>TAIR9_protein||AT3G20550.1 | Symbols: DDL | DDL (DAWDLE) | chr3:7174695-7177600
REVERSE
Length = 315
Score = 183 bits (463), Expect = 6e-047
Identities = 92/155 (59%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
Frame = -2
Query: 464 NRHRTHSPQQAADTRARDEVPESR-EAEDGIDENDSVAMMRXXXXXXXXXXXXXPSFELS 288
+R SP++A +R DE +R +E+ E DSVA MR PSFELS
Sbjct: 108 HRSSRRSPERAIASR-HDEGSNARGGSEEPNVEEDSVARMRAVEEALAAKKKEEPSFELS 166
Query: 287 GKLAAETNRFRGITLLYTEPAEGRPPHVKWRLYVFKGGEVLNDPIKIHRQSCYLFGRERR 108
GKLA ETNR+RGITLL+ EP E R P +WRLYVFK GE LN+P+ +HRQSCYLFGRERR
Sbjct: 167 GKLAEETNRYRGITLLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERR 226
Query: 107 VADIPTDHPSCSKQHAVIQFRQVEKEEPDGTLSKE 3
+ADIPTDHPSCSKQHAVIQ+R++EKE+PDG + K+
Sbjct: 227 IADIPTDHPSCSKQHAVIQYREMEKEKPDGMMGKQ 261
>TAIR9_protein||AT2G24410.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
DDL (DAWDLE) (TAIR:AT3G20550.1); Has 134 Blast hits to 134 proteins in
60 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 22; Plants
- 11; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
chr2:10379171-10379407 REVERSE
Length = 79
Score = 83 bits (204), Expect = 6e-017
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = -2
Query: 299 FELSGKLAAETNRFRGITLLYTEPAEGRPPHVKWRLYVFKGGEVLNDPIKIHRQSCYLFG 120
FELS KLA ETN ++GITLL+ P + R P +WRLY FK GE L + + IH Q CYLFG
Sbjct: 10 FELSRKLAEETNIYKGITLLFNNPVDNRKPKERWRLYHFKDGEPLKETLCIHYQICYLFG 69
Query: 119 RERRV 105
RER++
Sbjct: 70 RERKI 74
>TAIR9_protein||AT5G38840.1 | Symbols: | forkhead-associated domain-containing
protein / FHA domain-containing protein | chr5:15551329-15554846
FORWARD
Length = 736
Score = 49 bits (114), Expect = 2e-006
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = -2
Query: 239 YTEPAEGRPPHVKWRLYVFKGGEVLNDPIKIHRQSCYLFGRERRVADIPTDHPSCSKQHA 60
YT P PP +++L V K G ++ + + ++++ YLFGR+ + D +HPS S+ HA
Sbjct: 90 YTIPEWSGPPCHQFQLEVLKEGAIV-EKLDVYKKGAYLFGRD-GICDFALEHPSISRFHA 147
Query: 59 VIQFRQ 42
VIQ+++
Sbjct: 148 VIQYKR 153
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 981,265,849
Number of Sequences: 33410
Number of Extensions: 981265849
Number of Successful Extensions: 51510975
Number of sequences better than 0.0: 0
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