BLASTX 7.6.2
Query= RU03466 /QuerySize=1422
(1421 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G19810.1 | Symbols: | zinc finger (CCCH-type)... 339 4e-093
TAIR9_protein||AT4G29190.1 | Symbols: | zinc finger (CCCH-type)... 320 2e-087
TAIR9_protein||AT2G25900.1 | Symbols: ATCTH | ATCTH; transcripti... 288 7e-078
TAIR9_protein||AT1G03790.1 | Symbols: SOM | SOM (SOMNUS); nuclei... 197 2e-050
TAIR9_protein||AT5G44260.1 | Symbols: | zinc finger (CCCH-type)... 196 4e-050
TAIR9_protein||AT2G41900.1 | Symbols: | zinc finger (CCCH-type)... 190 3e-048
TAIR9_protein||AT5G12850.1 | Symbols: | zinc finger (CCCH-type)... 188 1e-047
TAIR9_protein||AT5G58620.1 | Symbols: | zinc finger (CCCH-type)... 184 1e-046
TAIR9_protein||AT5G07500.1 | Symbols: PEI1 | PEI1; nucleic acid ... 176 5e-044
TAIR9_protein||AT2G40140.1 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 ... 174 2e-043
TAIR9_protein||AT2G40140.2 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 ... 174 2e-043
TAIR9_protein||AT3G55980.1 | Symbols: SZF1, ATSZF1 | SZF1 (SALT-... 168 8e-042
>TAIR9_protein||AT2G19810.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:8550419-8551498 FORWARD
Length = 360
Score = 339 bits (867), Expect = 4e-093
Identities = 184/370 (49%), Positives = 222/370 (60%), Gaps = 45/370 (12%)
Frame = -1
Query: 1409 MMLGEPSR-LAPTLKVAPWDPFDDPTSGLGSPFSVRSPSANAGFLDSLSALHRFLPSNE- 1236
MM+GE R PT+ + PW +D T SP + +++L+ L R+LPSNE
Sbjct: 1 MMIGESHRGFNPTVHIPPWPLSEDLTVS----DIYGSPDGGSSMMEALAELQRYLPSNEP 56
Query: 1235 -----XXXXXXXXXXXXXXCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRK 1071
CD FRM+EFKVRRCARGRSHDWTECPYAHPGEKARRRDPRK
Sbjct: 57 DPDSDPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRK 116
Query: 1070 YHYSGSACPDFRKGNCAKGDSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTP 891
+HYSG+ACP+FRKG C +GD+CEF+HGVFECWLHPARYRTQPCKDG C RRVCFFAH+P
Sbjct: 117 FHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSP 176
Query: 890 EQLRVLPGHSPRTHGPGFFDXXXXXXXXX-----------------XXXXXXXXXXXXQL 762
+Q+RVLP SP FD L
Sbjct: 177 DQIRVLPNQSP--DRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDSDSSCSLLSRSL 234
Query: 761 RLNSVSELVASMRNFKLAKMQMSTTPP-----SWVGSGFGSPRGPPLRPDFFSLPNTPTR 597
N +++VAS+RN +L K++ S + GSGFGSPRG L P F SLP TPTR
Sbjct: 235 GSNLGNDVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTR 294
Query: 596 NSGRSGPGPFDLWEHSLVEEPAMERVESGRDLRARMYAKLSKDNSMGRV----DSGGFSG 429
PG ++WE+ L EEPAMERVESGR+LRA+++ KLSK+N MGR+ D G
Sbjct: 295 ------PGFMNIWENGLEEEPAMERVESGRELRAQLFEKLSKENCMGRIEPDPDQGAGDT 348
Query: 428 PDVEWVSELV 399
PDV WVS+LV
Sbjct: 349 PDVGWVSDLV 358
>TAIR9_protein||AT4G29190.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr4:14392233-14393303 REVERSE
Length = 357
Score = 320 bits (819), Expect = 2e-087
Identities = 178/367 (48%), Positives = 213/367 (58%), Gaps = 42/367 (11%)
Frame = -1
Query: 1409 MMLGEPSRLAPTLKVAPWDPFDDPTSGLGSPFSVRSPSANAGFLDSLSALHRFLPSNEXX 1230
MM+GE R PT+++ PW ++ T+ FS S + L++L+ L R+LPSNE
Sbjct: 1 MMIGETRRTYPTVEIPPWPVLEELTT--SEFFSPVMNSPDCSMLEALAGLQRYLPSNEPD 58
Query: 1229 XXXX------XXXXXXXXCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKY 1068
CD FRM++FKVRRCARGRSHDWTECPYAHPGEKARRRDPRKY
Sbjct: 59 PESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKY 118
Query: 1067 HYSGSACPDFRKGNCAKGDSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPE 888
HYSG+ACPDFRKG C KGDSCEFAHGVFECWLHPARYRTQPCKDG C R++CFFAH+P+
Sbjct: 119 HYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPD 178
Query: 887 QLRVLPGHSPRTHGPGFFDXXX-------------------XXXXXXXXXXXXXXXXXXQ 765
QLR L SP FD
Sbjct: 179 QLRFLHTRSP--DRVDSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLSRS 236
Query: 764 LRLNSVSELVASMRNFKLAKMQMSTTPPSWVGSGFGSPRGPPLRPDFFSLPNTPTRNSGR 585
L S++++V S RN + ++ + P + GFGSPRG L P F SLP TPTR
Sbjct: 237 LGSCSINDVVPSFRNLQFNSVK--SFPRNNPLFGFGSPRGSILGPGFQSLPTTPTR---- 290
Query: 584 SGPGPFDLWEHSLVEEPAMER-VESGRDLRARMYAKLSKDNSMGRV----DSGGFSGPDV 420
PG D+WE+ L EEP MER VESGR+LR +M KL K+N M RV D PDV
Sbjct: 291 --PGNLDIWEYGLEEEPVMERVVESGRELREKMREKLHKENCMDRVAQDPDQNLGEAPDV 348
Query: 419 EWVSELV 399
WVS+L+
Sbjct: 349 GWVSDLL 355
>TAIR9_protein||AT2G25900.1 | Symbols: ATCTH | ATCTH; transcription factor |
chr2:11041817-11042764 FORWARD
Length = 316
Score = 288 bits (736), Expect = 7e-078
Identities = 156/330 (47%), Positives = 199/330 (60%), Gaps = 33/330 (10%)
Frame = -1
Query: 1409 MMLGE-PSRLAPTLKVAPWDPFDDPTSGLGSPFSVRS-------PSANAGFLDSLSALHR 1254
MM+GE +R PT+ + WD +DPT+ + SPFS + P + + +LDS ++L R
Sbjct: 1 MMIGENKNRPHPTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFR 60
Query: 1253 FLPSNEXXXXXXXXX-------XXXXXCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEK 1095
+LPSNE D+FR++EFK+RRCARGRSHDWTECP+AHPGEK
Sbjct: 61 YLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEK 120
Query: 1094 ARRRDPRKYHYSGSACPDFRKGNCAKGDSCEFAHGVFECWLHPARYRTQPCKDGLACHRR 915
ARRRDPRK+HYSG+ACP+FRKG+C +GDSCEF+HGVFECWLHP+RYRTQPCKDG +C RR
Sbjct: 121 ARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRR 180
Query: 914 VCFFAHTPEQLRVLPGHSPRTHGPGFFDXXXXXXXXXXXXXXXXXXXXXQLRLNSVSELV 735
+CFFAHT EQLRVLP GFF S EL+
Sbjct: 181 ICFFAHTTEQLRVLP--CSLDPDLGFFSGLATSPTSILVSPSFSPPSESPPLSPSTGELI 238
Query: 734 ASMRNFKLAKMQMSTTPPSWVGSGFGSPRGPPLRPDFFSLPNTPTRNSGRSGPGPFDLWE 555
ASMR KMQ++ SW SP +R LP + + ++ P + E
Sbjct: 239 ASMR-----KMQLNGGGCSW-----SSPMRSAVR-----LPFSSSLRPIQAATWP-RIRE 282
Query: 554 HSLVEEPAMERVESGRDLRARMYAKLSKDN 465
+ E PAME VESG++LRA MYA+LS++N
Sbjct: 283 FEIEEAPAMEFVESGKELRAEMYARLSREN 312
>TAIR9_protein||AT1G03790.1 | Symbols: SOM | SOM (SOMNUS); nucleic acid binding
/ transcription factor | chr1:954589-955770 FORWARD
Length = 394
Score = 197 bits (500), Expect = 2e-050
Identities = 81/108 (75%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRK-GNCAKG 1014
D FRMFEFK+RRC R RSHDWT+CP+AHPGEKARRRDPR++ YSG CP+FR+ G+C++G
Sbjct: 81 DHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDCSRG 140
Query: 1013 DSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVLP 870
D CEFAHGVFECWLHP RYRT+ CKDG C R+VCFFAH+P QLRVLP
Sbjct: 141 DDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLP 188
>TAIR9_protein||AT5G44260.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:17829974-17831119 REVERSE
Length = 382
Score = 196 bits (497), Expect = 4e-050
Identities = 82/118 (69%), Positives = 98/118 (83%), Gaps = 2/118 (1%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDF-RKGNCAKG 1014
D FRM+EFK+RRC R RSHDWT+CP++HPGEKARRRDPR++HY+G CP+F R G+C++G
Sbjct: 59 DHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRG 118
Query: 1013 DSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVLPGHSPRTHGPG 840
D C FAHGVFECWLHP+RYRT+ CKDG C R+VCFFAH+P QLRVLP SP H G
Sbjct: 119 DECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLP-PSPENHISG 175
>TAIR9_protein||AT2G41900.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:17491352-17493502 FORWARD
Length = 717
Score = 190 bits (481), Expect = 3e-048
Identities = 79/106 (74%), Positives = 89/106 (83%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCAKGD 1011
D+FRM+ FKVR C+R SHDWTECP+ HPGE ARRRDPRK+HYS CPDFRKG C +GD
Sbjct: 260 DEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGD 319
Query: 1010 SCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVL 873
CE+AHGVFECWLHPA+YRT+ CKDG C RRVCFFAHTPE+LR L
Sbjct: 320 MCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELRPL 365
>TAIR9_protein||AT5G12850.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:4057068-4059188 FORWARD
Length = 707
Score = 188 bits (475), Expect = 1e-047
Identities = 76/106 (71%), Positives = 91/106 (85%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCAKGD 1011
D+FRMF FK+R C+R SHDWTECP+AHPGE ARRRDPRK+HY+ CPDF+KG+C +GD
Sbjct: 256 DEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPCPDFKKGSCKQGD 315
Query: 1010 SCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVL 873
CE+AHGVFECWLHPA+YRT+ CKDG+ C+RRVCFFAH E+LR L
Sbjct: 316 MCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHANEELRPL 361
>TAIR9_protein||AT5G58620.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:23693959-23695782 FORWARD
Length = 608
Score = 184 bits (467), Expect = 1e-046
Identities = 74/106 (69%), Positives = 90/106 (84%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCAKGD 1011
D+FRM+ FK++ C+R SHDWTECP+ HPGE ARRRDPRKYHYS CP+FRKG+C++GD
Sbjct: 208 DEFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSRGD 267
Query: 1010 SCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVL 873
+CE+AHG+FECWLHPA+YRT+ CKD C RRVCFFAH PE+LR L
Sbjct: 268 TCEYAHGIFECWLHPAQYRTRLCKDETNCSRRVCFFAHKPEELRPL 313
>TAIR9_protein||AT5G07500.1 | Symbols: PEI1 | PEI1; nucleic acid binding /
transcription factor/ zinc-mediated transcriptional activator |
chr5:2372716-2373453 FORWARD
Length = 246
Score = 176 bits (444), Expect = 5e-044
Identities = 75/108 (69%), Positives = 84/108 (77%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCAKGD 1011
D+FRM+ +K++RC R RSHDWTECPYAH GEKA RRDPR+Y Y ACP FR G C +GD
Sbjct: 51 DEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRNGACHRGD 110
Query: 1010 SCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVLPG 867
SCEFAHGVFE WLHPARYRT+ C G C R+VCFFAH PEQLR G
Sbjct: 111 SCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEG 158
>TAIR9_protein||AT2G40140.1 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 | CZF1;
transcription factor | chr2:16772537-16774330 FORWARD
Length = 598
Score = 174 bits (439), Expect = 2e-043
Identities = 73/104 (70%), Positives = 84/104 (80%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCAKGD 1011
D FRMF FKV+ C+R SHDWTECP+ HPGE ARRRDPRKY Y+ CP+FRKG+C KGD
Sbjct: 213 DDFRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPCPEFRKGSCPKGD 272
Query: 1010 SCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLR 879
SCE+AHGVFE WLHPA+YRT+ CKD C RRVCFFAH ++LR
Sbjct: 273 SCEYAHGVFESWLHPAQYRTRLCKDETGCARRVCFFAHRRDELR 316
>TAIR9_protein||AT2G40140.2 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 | CZF1;
transcription factor | chr2:16772537-16774330 FORWARD
Length = 598
Score = 174 bits (439), Expect = 2e-043
Identities = 73/104 (70%), Positives = 84/104 (80%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCAKGD 1011
D FRMF FKV+ C+R SHDWTECP+ HPGE ARRRDPRKY Y+ CP+FRKG+C KGD
Sbjct: 213 DDFRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPCPEFRKGSCPKGD 272
Query: 1010 SCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLR 879
SCE+AHGVFE WLHPA+YRT+ CKD C RRVCFFAH ++LR
Sbjct: 273 SCEYAHGVFESWLHPAQYRTRLCKDETGCARRVCFFAHRRDELR 316
>TAIR9_protein||AT3G55980.1 | Symbols: SZF1, ATSZF1 | SZF1 (SALT-INDUCIBLE ZINC
FINGER 1); transcription factor | chr3:20776857-20778599 FORWARD
Length = 581
Score = 168 bits (425), Expect = 8e-042
Identities = 69/104 (66%), Positives = 84/104 (80%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCAKGD 1011
D+FRM+ FKV+ C+R SHDWTEC + HPGE ARRRDPRKY Y+ CP+FRKG+C KGD
Sbjct: 210 DEFRMYSFKVKPCSRAYSHDWTECAFVHPGENARRRDPRKYPYTCVPCPEFRKGSCPKGD 269
Query: 1010 SCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLR 879
SCE+AHGVFE WLHPA+Y+T+ CKD C R+VCFFAH E++R
Sbjct: 270 SCEYAHGVFESWLHPAQYKTRLCKDETGCARKVCFFAHKREEMR 313
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 981,265,849
Number of Sequences: 33410
Number of Extensions: 981265849
Number of Successful Extensions: 51510975
Number of sequences better than 0.0: 0
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