BLASTX 7.6.2
Query= RU03499 /QuerySize=719
(718 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G16146.1 | Symbols: | FUNCTIONS IN: molecular... 119 3e-027
TAIR9_protein||AT5G64130.1 | Symbols: | FUNCTIONS IN: molecular... 80 9e-016
TAIR9_protein||AT1G69510.1 | Symbols: | FUNCTIONS IN: molecular... 77 9e-015
TAIR9_protein||AT1G69510.3 | Symbols: | FUNCTIONS IN: molecular... 77 9e-015
TAIR9_protein||AT1G69510.2 | Symbols: | FUNCTIONS IN: molecular... 77 9e-015
TAIR9_protein||AT5G64130.3 | Symbols: | FUNCTIONS IN: molecular... 57 1e-008
>TAIR9_protein||AT4G16146.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G69510.3); Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:9142663-9144356 REVERSE
Length = 103
Score = 119 bits (296), Expect = 3e-027
Identities = 53/94 (56%), Positives = 68/94 (72%)
Frame = -2
Query: 501 SDCNRSQDYFSVQEHEAPTAADKYGGLAPKKKPLFLKDHERAYFDSADWALCKQGAGVSP 322
+DCNR D+ Q+ E+ + A+KYGGL PKKKPL KD +RA+FDSADWAL KQ A +
Sbjct: 3 TDCNRVNDFLFSQQQESTSGANKYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQ 62
Query: 321 KSTAAVETLQPKLQRTPHQQLPPRRPACTTSGHD 220
++ AA+E L+PKLQRTP +QL PRRP C T +
Sbjct: 63 RTIAAIEKLRPKLQRTPRKQLSPRRPTCATGNEN 96
>TAIR9_protein||AT5G64130.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like
(InterPro:IPR012482); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G69510.3); Has 93 Blast hits to 93 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:25664547-25665339 REVERSE
Length = 116
Score = 80 bits (197), Expect = 9e-016
Identities = 43/95 (45%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = -2
Query: 492 NRSQDYFSVQEHEAPTAADKYGGLAPKKKPLFLKDHERAYFDSADWALCKQGAGVSPKST 313
N ++ + E KYGGL PKK PL KDHERAYFDSADWAL KQG K
Sbjct: 15 NEAEKSMPSSQQEEAVVKKKYGGLMPKKPPLISKDHERAYFDSADWALGKQGVA---KPK 71
Query: 312 AAVETLQPKLQRTPHQQLPPRRPACTTSGHDSHGA 208
+E L+PKLQ T Q + P + G + GA
Sbjct: 72 GPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGA 106
>TAIR9_protein||AT1G69510.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:26126779-26127725 FORWARD
Length = 138
Score = 77 bits (188), Expect = 9e-015
Identities = 44/74 (59%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = -2
Query: 462 EHEAPTAADKYGGLAPKKKPLFLKDHERAYFDSADWALCKQGAGVSPKSTAAVETLQPKL 283
E E KYGGL PKK PL KDHERA+FDSADWAL KQ G PK +E L+PKL
Sbjct: 24 ESEENAIKKKYGGLLPKKIPLISKDHERAFFDSADWALGKQ-KGQKPK--GPLEALRPKL 80
Query: 282 QRTPHQQLPPRRPA 241
Q TP QQ RR A
Sbjct: 81 QPTPQQQPRARRMA 94
>TAIR9_protein||AT1G69510.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:26126779-26127725 FORWARD
Length = 138
Score = 77 bits (188), Expect = 9e-015
Identities = 44/74 (59%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = -2
Query: 462 EHEAPTAADKYGGLAPKKKPLFLKDHERAYFDSADWALCKQGAGVSPKSTAAVETLQPKL 283
E E KYGGL PKK PL KDHERA+FDSADWAL KQ G PK +E L+PKL
Sbjct: 24 ESEENAIKKKYGGLLPKKIPLISKDHERAFFDSADWALGKQ-KGQKPK--GPLEALRPKL 80
Query: 282 QRTPHQQLPPRRPA 241
Q TP QQ RR A
Sbjct: 81 QPTPQQQPRARRMA 94
>TAIR9_protein||AT1G69510.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:26126779-26127725 FORWARD
Length = 138
Score = 77 bits (188), Expect = 9e-015
Identities = 44/74 (59%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = -2
Query: 462 EHEAPTAADKYGGLAPKKKPLFLKDHERAYFDSADWALCKQGAGVSPKSTAAVETLQPKL 283
E E KYGGL PKK PL KDHERA+FDSADWAL KQ G PK +E L+PKL
Sbjct: 24 ESEENAIKKKYGGLLPKKIPLISKDHERAFFDSADWALGKQ-KGQKPK--GPLEALRPKL 80
Query: 282 QRTPHQQLPPRRPA 241
Q TP QQ RR A
Sbjct: 81 QPTPQQQPRARRMA 94
>TAIR9_protein||AT5G64130.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like
(InterPro:IPR012482); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G69510.3); Has 91 Blast hits to 91 proteins in
11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:25664547-25665339 REVERSE
Length = 141
Score = 57 bits (136), Expect = 1e-008
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = -2
Query: 402 LFLKDHERAYFDSADWALCKQGAGVSPKSTAAVETLQPKLQRTPHQQLPPRRPACTTSGH 223
++ +DHERAYFDSADWAL KQG K +E L+PKLQ T Q + P + G
Sbjct: 70 VYNQDHERAYFDSADWALGKQGVA---KPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGG 126
Query: 222 DSHGA 208
+ GA
Sbjct: 127 EDGGA 131
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 981,265,849
Number of Sequences: 33410
Number of Extensions: 981265849
Number of Successful Extensions: 51510975
Number of sequences better than 0.0: 0
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