BLASTX 7.6.2
Query= RU03543 /QuerySize=960
(959 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G49930.1 | Symbols: | zinc finger (C2H2 type)... 126 2e-029
TAIR9_protein||AT5G04340.1 | Symbols: C2H2, CZF2, ZAT6 | ZAT6 (Z... 122 3e-028
TAIR9_protein||AT3G19580.1 | Symbols: AZF2 | AZF2 (ARABIDOPSIS Z... 118 7e-027
TAIR9_protein||AT3G19580.2 | Symbols: AZF2 | AZF2 (ARABIDOPSIS Z... 118 7e-027
TAIR9_protein||AT1G27730.1 | Symbols: STZ, ZAT10 | STZ (salt tol... 101 9e-022
TAIR9_protein||AT1G49900.1 | Symbols: | zinc finger (C2H2 type)... 82 6e-016
TAIR9_protein||AT3G60580.1 | Symbols: | zinc finger (C2H2 type)... 72 4e-013
TAIR9_protein||AT2G45120.1 | Symbols: | zinc finger (C2H2 type)... 72 6e-013
TAIR9_protein||AT1G02030.1 | Symbols: | zinc finger (C2H2 type)... 70 2e-012
TAIR9_protein||AT3G46080.1 | Symbols: | zinc finger (C2H2 type)... 63 2e-010
TAIR9_protein||AT5G67450.1 | Symbols: AZF1 | AZF1 (ARABIDOPSIS Z... 63 2e-010
TAIR9_protein||AT5G43170.1 | Symbols: AZF3 | AZF3 (ARABIDOPSIS Z... 57 1e-008
TAIR9_protein||AT2G28200.1 | Symbols: | nucleic acid binding / ... 54 2e-007
TAIR9_protein||AT1G02040.1 | Symbols: | zinc finger (C2H2 type)... 52 4e-007
TAIR9_protein||AT5G56200.1 | Symbols: | zinc finger (C2H2 type)... 50 1e-006
>TAIR9_protein||AT3G49930.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr3:18510246-18510893 FORWARD
Length = 216
Score = 126 bits (316), Expect = 2e-029
Identities = 64/139 (46%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Frame = +1
Query: 154 SKRKRSKRPRFED---SLSEEEYMAFCLLLLARGGXXXXXXXXXXXXXXXXXXXXXSYRC 324
+KRKR+KR R + SEEEY+A CLL+LARG Y+C
Sbjct: 37 TKRKRTKRHRIDQPNPPPSEEEYLALCLLMLARGSSDHHSPPSDHHSLSPLSDHQKDYKC 96
Query: 325 VVCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTAASGGRTHECTICHK 504
VC K+F SYQALGGHK SHRK I G+TH C+IC K
Sbjct: 97 SVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFK 156
Query: 505 CFPTGQALGGHKRCHYDGG 561
FP+GQALGGHKRCHYDGG
Sbjct: 157 SFPSGQALGGHKRCHYDGG 175
>TAIR9_protein||AT5G04340.1 | Symbols: C2H2, CZF2, ZAT6 | ZAT6 (ZINC FINGER OF
ARABIDOPSIS THALIANA 6); nucleic acid binding / transcription factor/
zinc ion binding | chr5:1216321-1217037 REVERSE
Length = 239
Score = 122 bits (306), Expect = 3e-028
Identities = 76/177 (42%), Positives = 92/177 (51%), Gaps = 16/177 (9%)
Frame = +1
Query: 64 MALQALNSPNTAALGG--FEDEPNRNMNHHLASKRKRSKRPRFE---DSLSEEEYMAFCL 228
MAL+ L SP ++ F+D + H SK KRSKR R E SL+E+EY+A CL
Sbjct: 1 MALETLTSPRLSSPMPTLFQDSA---LGFH-GSKGKRSKRSRSEFDRQSLTEDEYIALCL 56
Query: 229 LLLARGGXXXXXXXXXXXXXX---XXXXXXXSYRCVVCSKAFGSYQALGGHKASHRKXXX 399
+LLAR G Y+C VC KAF SYQALGGHKASHRK
Sbjct: 57 MLLARDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHKASHRKSFS 116
Query: 400 XXXXXXXXXXXXKTEIPAVTAASGG----RTHECTICHKCFPTGQALGGHKRCHYDG 558
+ I + GG ++H C+ICHK F TGQALGGHKRCHY+G
Sbjct: 117 LTQSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEG 173
>TAIR9_protein||AT3G19580.1 | Symbols: AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER
PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding | chr3:6803293-6804114
REVERSE
Length = 274
Score = 118 bits (294), Expect = 7e-027
Identities = 70/185 (37%), Positives = 83/185 (44%), Gaps = 7/185 (3%)
Frame = +1
Query: 151 ASKRKRSKRPRFEDSLSEEEYMAFCLLLLARG-GXXXXXXXXXXXXXXXXXXXXXSYRCV 327
+S RS+ L+EEEY+A CLL+LA+ Y+C
Sbjct: 50 SSSPPRSRPKSQNQDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCN 109
Query: 328 VCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTA-----ASGGRTHECT 492
VC KAF SYQALGGHKASHR T I V A+ G+ HEC+
Sbjct: 110 VCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPT-ISIVAGEKHPIAASGKIHECS 168
Query: 493 ICHKCFPTGQALGGHKRCHYDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLDLNLP 672
ICHK FPTGQALGGHKRCHY+G +DLNLP
Sbjct: 169 ICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHRGFIDLNLP 228
Query: 673 AEPEV 687
A PE+
Sbjct: 229 ALPEL 233
>TAIR9_protein||AT3G19580.2 | Symbols: AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER
PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding | chr3:6803293-6804114
REVERSE
Length = 274
Score = 118 bits (294), Expect = 7e-027
Identities = 70/185 (37%), Positives = 83/185 (44%), Gaps = 7/185 (3%)
Frame = +1
Query: 151 ASKRKRSKRPRFEDSLSEEEYMAFCLLLLARG-GXXXXXXXXXXXXXXXXXXXXXSYRCV 327
+S RS+ L+EEEY+A CLL+LA+ Y+C
Sbjct: 50 SSSPPRSRPKSQNQDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCN 109
Query: 328 VCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTA-----ASGGRTHECT 492
VC KAF SYQALGGHKASHR T I V A+ G+ HEC+
Sbjct: 110 VCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPT-ISIVAGEKHPIAASGKIHECS 168
Query: 493 ICHKCFPTGQALGGHKRCHYDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLDLNLP 672
ICHK FPTGQALGGHKRCHY+G +DLNLP
Sbjct: 169 ICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHRGFIDLNLP 228
Query: 673 AEPEV 687
A PE+
Sbjct: 229 ALPEL 233
>TAIR9_protein||AT1G27730.1 | Symbols: STZ, ZAT10 | STZ (salt tolerance zinc
finger); nucleic acid binding / transcription factor/ transcription
repressor/ zinc ion binding | chr1:9648302-9648985 REVERSE
Length = 228
Score = 101 bits (250), Expect = 9e-022
Identities = 55/130 (42%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Frame = +1
Query: 313 SYRCVVCSKAFGSYQALGGHKASHRK--XXXXXXXXXXXXXXXKTEIPAVTAASGGRTHE 486
SY+C VC K F SYQALGGHKASHRK T AVT S G++H
Sbjct: 79 SYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGS-GKSHV 137
Query: 487 CTICHKCFPTGQALGGHKRCHYDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLDLN 666
CTIC+K FP+GQALGGHKRCHY+G DLN
Sbjct: 138 CTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSEGAGSTSHVSSSHRG-----FDLN 192
Query: 667 LPAEPEVLQV 696
+P PE V
Sbjct: 193 IPPIPEFSMV 202
>TAIR9_protein||AT1G49900.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr1:18474108-18477643 REVERSE
Length = 918
Score = 82 bits (200), Expect = 6e-016
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +1
Query: 316 YRCVVCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTAASGGRTHECTI 495
++C +C K F SYQALGGHKASH KT ++ + G+ H+C I
Sbjct: 193 FKCSICEKVFTSYQALGGHKASH-SIKAAQLENAGADAGEKTRSKMLSPS--GKIHKCDI 249
Query: 496 CHKCFPTGQALGGHKRCHYDG 558
CH FPTGQALGGHKR HY+G
Sbjct: 250 CHVLFPTGQALGGHKRRHYEG 270
Score = 80 bits (195), Expect = 2e-015
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Frame = +1
Query: 313 SYRCVVCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTAASGGRTHECT 492
SY+C VC + SYQALGGHKASHR K A G+ H+C+
Sbjct: 749 SYQCNVCGRELPSYQALGGHKASHRTKPPVENATGEKMRPKK-------LAPSGKIHKCS 801
Query: 493 ICHKCFPTGQALGGHKRCHYDG 558
ICH+ F TGQ+LGGHKR HY+G
Sbjct: 802 ICHREFSTGQSLGGHKRLHYEG 823
>TAIR9_protein||AT3G60580.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr3:22394007-22394873 FORWARD
Length = 289
Score = 72 bits (176), Expect = 4e-013
Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +1
Query: 316 YRCVVCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTAASGGRTHECTI 495
Y+C C K F SYQALGGH+ASH+K +TE V + R HEC I
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKK---NRVSNNKTEQRSETEYDNVVVVA-KRIHECPI 228
Query: 496 CHKCFPTGQALGGHKRCH 549
C + F +GQALGGHKR H
Sbjct: 229 CLRVFASGQALGGHKRSH 246
>TAIR9_protein||AT2G45120.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr2:18603680-18604624 FORWARD
Length = 315
Score = 72 bits (174), Expect = 6e-013
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +1
Query: 316 YRCVVCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTAASGGRTHECTI 495
++C C K F SYQALGGH+ASH+K + E V + HEC I
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKK------NKACMTKTEQVETEYVLGVKEKKVHECPI 247
Query: 496 CHKCFPTGQALGGHKRCH 549
C + F +GQALGGHKR H
Sbjct: 248 CFRVFTSGQALGGHKRSH 265
>TAIR9_protein||AT1G02030.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr1:355385-356188 REVERSE
Length = 268
Score = 70 bits (169), Expect = 2e-012
Identities = 35/78 (44%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +1
Query: 316 YRCVVCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTAASGGRTHECTI 495
+ C C K F SYQALGGH+ASH+K E+ S HEC I
Sbjct: 160 FECETCEKVFKSYQALGGHRASHKK------KIAETDQLGSDELKKKKKKSTSSHHECPI 213
Query: 496 CHKCFPTGQALGGHKRCH 549
C K F +GQALGGHKR H
Sbjct: 214 CAKVFTSGQALGGHKRSH 231
>TAIR9_protein||AT3G46080.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr3:16922753-16923247 REVERSE
Length = 165
Score = 63 bits (152), Expect = 2e-010
Identities = 33/78 (42%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +1
Query: 316 YRCVVCSKAFGSYQALGGHKASHRKXXXXXXXXXXXXXXXKTEIPAVTAASGGRTHECTI 495
+RC C K F S+QALGGH+ASH+K K A +H C I
Sbjct: 37 FRCKTCLKEFSSFQALGGHRASHKKLINSSDPSLLGSLSNKKTKTAT-------SHPCPI 89
Query: 496 CHKCFPTGQALGGHKRCH 549
C FP GQALGGH R H
Sbjct: 90 CGVEFPMGQALGGHMRRH 107
>TAIR9_protein||AT5G67450.1 | Symbols: AZF1 | AZF1 (ARABIDOPSIS ZINC-FINGER
PROTEIN 1); DNA binding / nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding | chr5:26919142-26919879
REVERSE
Length = 246
Score = 63 bits (152), Expect = 2e-010
Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 199 SEEEYMAFCLLLLARGGXXXXXXXXXXXXXXXXXXXXXSYRCVVCSKAFGSYQALGGHKA 378
SEEEY+A CLL+LAR G Y+C VC K+F SYQALGGHK
Sbjct: 59 SEEEYLALCLLMLAR-GSAVQSPPLPPLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKT 117
Query: 379 SHRK 390
SHRK
Sbjct: 118 SHRK 121
Score = 58 bits (138), Expect = 9e-009
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +1
Query: 463 ASGGRTHECTICHKCFPTGQALGGHKRCHYDGG 561
+ G+ H C+IC K F +GQALGGHKRCHYDGG
Sbjct: 158 SQSGKIHTCSICFKSFASGQALGGHKRCHYDGG 190
>TAIR9_protein||AT5G43170.1 | Symbols: AZF3 | AZF3 (ARABIDOPSIS ZINC-FINGER
PROTEIN 3); DNA binding / nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding | chr5:17331050-17331631
REVERSE
Length = 194
Score = 57 bits (137), Expect = 1e-008
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +1
Query: 457 TAASGGRTHECTICHKCFPTGQALGGHKRCHYDGG 561
T ++ ++H C++C K F TGQALGGHKRCHYDGG
Sbjct: 110 TPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDGG 144
>TAIR9_protein||AT2G28200.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr2:12024321-12025181 FORWARD
Length = 287
Score = 54 bits (127), Expect = 2e-007
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 178 PRFEDSLSEEEYMAFCLLLLARGGXXXXXXXXXXXXXXXXXXXXXS----YRCVVCSKAF 345
P D EEE MA CL++LARG S Y C C++ F
Sbjct: 65 PVTTDCTQEEEDMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTF 124
Query: 346 GSYQALGGHKASHRK 390
S+QALGGH+ASH+K
Sbjct: 125 SSFQALGGHRASHKK 139
>TAIR9_protein||AT1G02040.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr1:358104-359078 REVERSE
Length = 325
Score = 52 bits (124), Expect = 4e-007
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 460 AASGGRTHECTICHKCFPTGQALGGHKRCHY 552
A HECTICH+ F +GQALGGHKRCH+
Sbjct: 218 ARKRSNAHECTICHRVFSSGQALGGHKRCHW 248
Score = 48 bits (112), Expect = 9e-006
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Frame = +1
Query: 109 GFEDEPNRNMNHHLASKRKRS-KRPRFEDSLSEEEYMAFCLLLL-----ARGGXXXXXXX 270
G DE N + +R S + S +E+E +A CL+LL A GG
Sbjct: 75 GQHDEDNMSRRPPWKRERSMSTQHHHLNLSPNEDEELANCLVLLSNSGDAHGGDQHKQHG 134
Query: 271 XXXXXXXXXXXXXXSYRCVVCSKAFGSYQALGGHKASHRK 390
++C C K F S+QALGGH+ASH+K
Sbjct: 135 HGKGKTVKKQKTAQVFQCKACKKVFTSHQALGGHRASHKK 174
>TAIR9_protein||AT5G56200.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr5:22747768-22749249 FORWARD
Length = 494
Score = 50 bits (119), Expect = 1e-006
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 460 AASGGRTHECTICHKCFPTGQALGGHKRCHY 552
++S H C ICHK F TGQALGGHKRCH+
Sbjct: 404 SSSHNGDHVCNICHKSFSTGQALGGHKRCHW 434
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 981,265,849
Number of Sequences: 33410
Number of Extensions: 981265849
Number of Successful Extensions: 51510975
Number of sequences better than 0.0: 0
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