BLASTX 7.6.2
Query= RU03592 /QuerySize=1031
(1030 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G07540.1 | Symbols: TRFL2 | TRFL2 (TRF-LIKE 2)... 180 1e-045
TAIR9_protein||AT3G12560.1 | Symbols: TRFL9, ATTBP2 | TRFL9 (TRF... 171 8e-043
TAIR9_protein||AT5G13820.1 | Symbols: TBP1, ATBP-1, ATBP1, ATTBP... 171 1e-042
TAIR9_protein||AT3G46590.1 | Symbols: TRFL1, ATTRP2, TRP2 | TRFL... 163 3e-040
TAIR9_protein||AT3G46590.2 | Symbols: TRFL1, ATTRP2 | TRFL1 (TRF... 163 3e-040
TAIR9_protein||AT3G46590.3 | Symbols: TRFL1, ATTRP2 | TRFL1 (TRF... 163 3e-040
TAIR9_protein||AT5G59430.1 | Symbols: ATTRP1, TRP1 | TRP1 (TELOM... 152 5e-037
TAIR9_protein||AT5G59430.2 | Symbols: ATTRP1 | TRP1 (TELOMERIC R... 152 5e-037
TAIR9_protein||AT5G59430.4 | Symbols: ATTRP1 | TRP1 (TELOMERIC R... 152 5e-037
TAIR9_protein||AT5G59430.3 | Symbols: ATTRP1 | TRP1 (TELOMERIC R... 150 2e-036
TAIR9_protein||AT3G53790.1 | Symbols: TRFL4 | TRFL4 (TRF-LIKE 4)... 132 5e-031
>TAIR9_protein||AT1G07540.1 | Symbols: TRFL2 | TRFL2 (TRF-LIKE 2); DNA binding |
chr1:2318433-2321048 REVERSE
Length = 631
Score = 180 bits (456), Expect = 1e-045
Identities = 89/121 (73%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
Frame = +2
Query: 158 LVVVPEMSAEALAVVPGNRKSKRFDIGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVKM 337
L+ V + A+AL VVP RK+KR ++ QRRIRRPFS +LGTGRWRDVK+
Sbjct: 498 LIPVSPLHAQALTVVP-PRKTKRSEVAQRRIRRPFSVAEVEALVQAVERLGTGRWRDVKL 556
Query: 338 RAFENAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQQ 517
RAF+NAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQ K Q
Sbjct: 557 RAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQGKHQ 616
Query: 518 L 520
L
Sbjct: 617 L 617
>TAIR9_protein||AT3G12560.1 | Symbols: TRFL9, ATTBP2 | TRFL9 (TRF-LIKE 9); DNA
bending/ DNA binding / telomeric DNA binding | chr3:3982272-3984848
REVERSE
Length = 620
Score = 171 bits (432), Expect = 8e-043
Identities = 82/122 (67%), Positives = 94/122 (77%)
Frame = +2
Query: 158 LVVVPEMSAEALAVVPGNRKSKRFDIGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVKM 337
LV +PE+ +ALA+VP N+K KR ++ QRR RRPFS +LGTGRWRDVK+
Sbjct: 478 LVPLPELEVKALAIVPLNQKPKRTELAQRRTRRPFSVTEVEALVQAVEELGTGRWRDVKL 537
Query: 338 RAFENAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQQ 517
RAFE+A HRTYVDLKDKWKTLVHTA ISPQQRRGEPVPQELLDRVL A+ YWSQ Q K Q
Sbjct: 538 RAFEDADHRTYVDLKDKWKTLVHTASISPQQRRGEPVPQELLDRVLRAYGYWSQHQGKHQ 597
Query: 518 LK 523
+
Sbjct: 598 AR 599
>TAIR9_protein||AT5G13820.1 | Symbols: TBP1, ATBP-1, ATBP1, ATTBP1, HPPBF-1 |
TBP1 (TELOMERIC DNA BINDING PROTEIN 1); DNA binding / double-stranded
telomeric DNA binding | chr5:4461694-4464355 FORWARD
Length = 641
Score = 171 bits (431), Expect = 1e-042
Identities = 83/130 (63%), Positives = 96/130 (73%)
Frame = +2
Query: 158 LVVVPEMSAEALAVVPGNRKSKRFDIGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVKM 337
LV V + ++ALA+VP N K KR ++ QRR RRPFS ++GTGRWRDVK+
Sbjct: 504 LVPVLALESDALALVPVNEKPKRTELSQRRTRRPFSVTEVEALVSAVEEVGTGRWRDVKL 563
Query: 338 RAFENAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQQ 517
R+FENA HRTYVDLKDKWKTLVHTA ISPQQRRGEPVPQELLDRVL AH YW+Q Q KQ
Sbjct: 564 RSFENASHRTYVDLKDKWKTLVHTASISPQQRRGEPVPQELLDRVLGAHRYWTQHQMKQN 623
Query: 518 LKHPESCVLV 547
KH + +V
Sbjct: 624 GKHQVATTMV 633
>TAIR9_protein||AT3G46590.1 | Symbols: TRFL1, ATTRP2, TRP2 | TRFL1 (TRF-LIKE 1);
DNA bending/ DNA binding / telomeric DNA binding |
chr3:17153642-17155946 FORWARD
Length = 553
Score = 163 bits (410), Expect = 3e-040
Identities = 85/127 (66%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Frame = +2
Query: 164 VVPEMSAEALAVVPGNRKSKRFD---IGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVK 334
++P SA LA P NRK KR + QRRIRRPFS KLGTGRWRDVK
Sbjct: 420 LIPVASAAMLAPRPPNRKFKRTEQQLAAQRRIRRPFSVTEVEALVQAVEKLGTGRWRDVK 479
Query: 335 MRAFENAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQ 514
+RAFE+A HRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQ Q
Sbjct: 480 VRAFEDADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLKAHAYWSQHLMHQ 539
Query: 515 QLKHPES 535
P S
Sbjct: 540 LQTEPPS 546
>TAIR9_protein||AT3G46590.2 | Symbols: TRFL1, ATTRP2 | TRFL1 (TRF-LIKE 1); DNA
bending/ DNA binding / telomeric DNA binding | chr3:17153642-17155946
FORWARD
Length = 554
Score = 163 bits (410), Expect = 3e-040
Identities = 85/127 (66%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Frame = +2
Query: 164 VVPEMSAEALAVVPGNRKSKRFD---IGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVK 334
++P SA LA P NRK KR + QRRIRRPFS KLGTGRWRDVK
Sbjct: 421 LIPVASAAMLAPRPPNRKFKRTEQQLAAQRRIRRPFSVTEVEALVQAVEKLGTGRWRDVK 480
Query: 335 MRAFENAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQ 514
+RAFE+A HRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQ Q
Sbjct: 481 VRAFEDADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLKAHAYWSQHLMHQ 540
Query: 515 QLKHPES 535
P S
Sbjct: 541 LQTEPPS 547
>TAIR9_protein||AT3G46590.3 | Symbols: TRFL1, ATTRP2 | TRFL1 (TRF-LIKE 1); DNA
bending/ DNA binding / telomeric DNA binding | chr3:17153642-17155946
FORWARD
Length = 548
Score = 163 bits (410), Expect = 3e-040
Identities = 85/127 (66%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Frame = +2
Query: 164 VVPEMSAEALAVVPGNRKSKRFD---IGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVK 334
++P SA LA P NRK KR + QRRIRRPFS KLGTGRWRDVK
Sbjct: 415 LIPVASAAMLAPRPPNRKFKRTEQQLAAQRRIRRPFSVTEVEALVQAVEKLGTGRWRDVK 474
Query: 335 MRAFENAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQ 514
+RAFE+A HRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQ Q
Sbjct: 475 VRAFEDADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLKAHAYWSQHLMHQ 534
Query: 515 QLKHPES 535
P S
Sbjct: 535 LQTEPPS 541
>TAIR9_protein||AT5G59430.1 | Symbols: ATTRP1, TRP1 | TRP1 (TELOMERIC REPEAT
BINDING PROTEIN 1); DNA binding / double-stranded telomeric DNA binding
| chr5:23968254-23970695 FORWARD
Length = 579
Score = 152 bits (382), Expect = 5e-037
Identities = 81/154 (52%), Positives = 98/154 (63%), Gaps = 6/154 (3%)
Frame = +2
Query: 71 LGSFIESD-HDSAXXXXXXXXXXXXXXXXXLVVVPEMSAEALAVVPGNRKSKRFD----- 232
+ + +ESD HDSA ++ ++ + P +RKS+R +
Sbjct: 402 IDNVLESDHHDSALFPSDSLGNNNVTEDSKAMISVALNELSSQSQPPSRKSRRSEQQQQQ 461
Query: 233 IGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVKMRAFENAKHRTYVDLKDKWKTLVHTA 412
QRRIRRPFS KLGTGRWRDVK+ AFE+A HRTYVDLKDKWKTLVHTA
Sbjct: 462 AAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTA 521
Query: 413 RISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQ 514
+ISPQQRRGEPVPQELL+RVL AH YW+QQQ +Q
Sbjct: 522 KISPQQRRGEPVPQELLNRVLNAHGYWTQQQMQQ 555
>TAIR9_protein||AT5G59430.2 | Symbols: ATTRP1 | TRP1 (TELOMERIC REPEAT BINDING
PROTEIN 1); DNA binding / double-stranded telomeric DNA binding |
chr5:23968254-23970695 FORWARD
Length = 579
Score = 152 bits (382), Expect = 5e-037
Identities = 81/154 (52%), Positives = 98/154 (63%), Gaps = 6/154 (3%)
Frame = +2
Query: 71 LGSFIESD-HDSAXXXXXXXXXXXXXXXXXLVVVPEMSAEALAVVPGNRKSKRFD----- 232
+ + +ESD HDSA ++ ++ + P +RKS+R +
Sbjct: 402 IDNVLESDHHDSALFPSDSLGNNNVTEDSKAMISVALNELSSQSQPPSRKSRRSEQQQQQ 461
Query: 233 IGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVKMRAFENAKHRTYVDLKDKWKTLVHTA 412
QRRIRRPFS KLGTGRWRDVK+ AFE+A HRTYVDLKDKWKTLVHTA
Sbjct: 462 AAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTA 521
Query: 413 RISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQ 514
+ISPQQRRGEPVPQELL+RVL AH YW+QQQ +Q
Sbjct: 522 KISPQQRRGEPVPQELLNRVLNAHGYWTQQQMQQ 555
>TAIR9_protein||AT5G59430.4 | Symbols: ATTRP1 | TRP1 (TELOMERIC REPEAT BINDING
PROTEIN 1); DNA binding / double-stranded telomeric DNA binding |
chr5:23968254-23970695 FORWARD
Length = 578
Score = 152 bits (382), Expect = 5e-037
Identities = 81/154 (52%), Positives = 98/154 (63%), Gaps = 6/154 (3%)
Frame = +2
Query: 71 LGSFIESD-HDSAXXXXXXXXXXXXXXXXXLVVVPEMSAEALAVVPGNRKSKRFD----- 232
+ + +ESD HDSA ++ ++ + P +RKS+R +
Sbjct: 401 IDNVLESDHHDSALFPSDSLGNNNVTEDSKAMISVALNELSSQSQPPSRKSRRSEQQQQQ 460
Query: 233 IGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVKMRAFENAKHRTYVDLKDKWKTLVHTA 412
QRRIRRPFS KLGTGRWRDVK+ AFE+A HRTYVDLKDKWKTLVHTA
Sbjct: 461 AAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTA 520
Query: 413 RISPQQRRGEPVPQELLDRVLTAHAYWSQQQAKQ 514
+ISPQQRRGEPVPQELL+RVL AH YW+QQQ +Q
Sbjct: 521 KISPQQRRGEPVPQELLNRVLNAHGYWTQQQMQQ 554
>TAIR9_protein||AT5G59430.3 | Symbols: ATTRP1 | TRP1 (TELOMERIC REPEAT BINDING
PROTEIN 1); DNA binding / double-stranded telomeric DNA binding |
chr5:23968254-23970753 FORWARD
Length = 569
Score = 150 bits (377), Expect = 2e-036
Identities = 80/151 (52%), Positives = 96/151 (63%), Gaps = 6/151 (3%)
Frame = +2
Query: 71 LGSFIESD-HDSAXXXXXXXXXXXXXXXXXLVVVPEMSAEALAVVPGNRKSKRFD----- 232
+ + +ESD HDSA ++ ++ + P +RKS+R +
Sbjct: 402 IDNVLESDHHDSALFPSDSLGNNNVTEDSKAMISVALNELSSQSQPPSRKSRRSEQQQQQ 461
Query: 233 IGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVKMRAFENAKHRTYVDLKDKWKTLVHTA 412
QRRIRRPFS KLGTGRWRDVK+ AFE+A HRTYVDLKDKWKTLVHTA
Sbjct: 462 AAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTA 521
Query: 413 RISPQQRRGEPVPQELLDRVLTAHAYWSQQQ 505
+ISPQQRRGEPVPQELL+RVL AH YW+QQQ
Sbjct: 522 KISPQQRRGEPVPQELLNRVLNAHGYWTQQQ 552
>TAIR9_protein||AT3G53790.1 | Symbols: TRFL4 | TRFL4 (TRF-LIKE 4); DNA binding |
chr3:19928478-19930267 FORWARD
Length = 401
Score = 132 bits (330), Expect = 5e-031
Identities = 68/112 (60%), Positives = 81/112 (72%), Gaps = 4/112 (3%)
Frame = +2
Query: 179 SAEALA---VVPGNRK-SKRFDIGQRRIRRPFSXXXXXXXXXXXXKLGTGRWRDVKMRAF 346
S EA+A VVP K + + ++ QRRIRRPF+ +LGTGRWRDVK AF
Sbjct: 287 STEAVAAKSVVPVRMKPAWQPEMVQRRIRRPFTVSEVEALVQAVERLGTGRWRDVKSHAF 346
Query: 347 ENAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQ 502
+ HRTYVDLKDKWKTLVHTA+IS +QRRGEPVPQ+LLDRVL AHA+WS +
Sbjct: 347 NHVNHRTYVDLKDKWKTLVHTAKISARQRRGEPVPQDLLDRVLAAHAFWSDR 398
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 981,265,849
Number of Sequences: 33410
Number of Extensions: 981265849
Number of Successful Extensions: 51510975
Number of sequences better than 0.0: 0
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