BLASTX 7.6.2
Query= RU03629 /QuerySize=613
(612 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G73830.1 | Symbols: BEE3 | BEE3 (BR ENHANCED E... 75 4e-014
TAIR9_protein||AT1G18400.1 | Symbols: BEE1 | BEE1 (BR Enhanced E... 73 1e-013
TAIR9_protein||AT1G25330.1 | Symbols: | basic helix-loop-helix ... 72 2e-013
TAIR9_protein||AT1G26260.1 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-... 54 9e-008
TAIR9_protein||AT1G26260.2 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-... 54 9e-008
TAIR9_protein||AT1G26260.3 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-... 54 9e-008
TAIR9_protein||AT1G68920.1 | Symbols: | basic helix-loop-helix ... 52 3e-007
TAIR9_protein||AT1G68920.2 | Symbols: | basic helix-loop-helix ... 52 3e-007
TAIR9_protein||AT1G68920.3 | Symbols: | basic helix-loop-helix ... 52 3e-007
TAIR9_protein||AT3G07340.1 | Symbols: | basic helix-loop-helix ... 52 3e-007
TAIR9_protein||AT5G48560.1 | Symbols: | basic helix-loop-helix ... 51 4e-007
TAIR9_protein||AT3G23690.1 | Symbols: | basic helix-loop-helix ... 51 6e-007
TAIR9_protein||AT5G50915.1 | Symbols: | basic helix-loop-helix ... 51 6e-007
TAIR9_protein||AT5G50915.2 | Symbols: | basic helix-loop-helix ... 51 6e-007
>TAIR9_protein||AT1G73830.1 | Symbols: BEE3 | BEE3 (BR ENHANCED EXPRESSION 3);
DNA binding / transcription factor | chr1:27760027-27761346 FORWARD
Length = 262
Score = 75 bits (182), Expect = 4e-014
Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 498 RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFNSPGHADPVDTTQGTNAYEVQ 319
+TMGMA MLD +I+YVQSLQNQ+EFLSMKL+AAS YYDFNS D V++ Q A E
Sbjct: 185 KTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNS--ETDAVESMQKAKAREAV 242
Query: 318 E 316
E
Sbjct: 243 E 243
Score = 49 bits (116), Expect = 2e-006
Identities = 20/36 (55%), Positives = 31/36 (86%)
Frame = -1
Query: 603 KRKRSNSDKDMDKPKEVIHVRAKRGQATDSHSLAER 496
+R + + +++ +K +EV+HVRA+RGQATDSHS+AER
Sbjct: 128 RRGKRSKNREEEKEREVVHVRARRGQATDSHSIAER 163
>TAIR9_protein||AT1G18400.1 | Symbols: BEE1 | BEE1 (BR Enhanced Expression 1);
transcription factor | chr1:6331464-6333576 FORWARD
Length = 261
Score = 73 bits (177), Expect = 1e-013
Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = -1
Query: 498 RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFNSPGHADPVDTTQGTNAYEVQ 319
+ MGMA MLD +I+YVQSLQNQ+EFLSMKL+AAS +YDFNS D VD+ Q A E
Sbjct: 183 KAMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNS--ETDAVDSMQRAKARETV 240
Query: 318 E 316
E
Sbjct: 241 E 241
Score = 51 bits (120), Expect = 6e-007
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -1
Query: 603 KRKRSNSDKDMDKPKEVIHVRAKRGQATDSHSLAER 496
KR + +++ +K +EV+HVRA+RGQATDSHSLAER
Sbjct: 126 KRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAER 161
>TAIR9_protein||AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:8880515-8882018 REVERSE
Length = 224
Score = 72 bits (176), Expect = 2e-013
Identities = 39/61 (63%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -1
Query: 498 RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFNSPGHADPVDTTQGTNAYEVQ 319
+ MGMAVMLDV+I YV+SLQNQIEFLSMKLSAAS YD NS +P D QG N +
Sbjct: 142 KAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSL-DIEPTDIFQGGNIHSAA 200
Query: 318 E 316
E
Sbjct: 201 E 201
Score = 52 bits (122), Expect = 3e-007
Identities = 26/39 (66%), Positives = 31/39 (79%), Gaps = 5/39 (12%)
Frame = -1
Query: 597 KRSNSDKDMD-----KPKEVIHVRAKRGQATDSHSLAER 496
KRS ++ M+ KPK+V+HVRAKRGQATDSHSLAER
Sbjct: 82 KRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAER 120
>TAIR9_protein||AT1G26260.1 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-INTERACTING
BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factor |
chr1:9087214-9089035 FORWARD
Length = 391
Score = 54 bits (127), Expect = 9e-008
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -1
Query: 501 ERTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFN 379
++ G AVMLD +I+YVQSLQ QIEFLSMKLSA + DFN
Sbjct: 260 DKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFN 300
>TAIR9_protein||AT1G26260.2 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-INTERACTING
BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factor |
chr1:9087214-9089035 FORWARD
Length = 391
Score = 54 bits (127), Expect = 9e-008
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -1
Query: 501 ERTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFN 379
++ G AVMLD +I+YVQSLQ QIEFLSMKLSA + DFN
Sbjct: 260 DKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFN 300
>TAIR9_protein||AT1G26260.3 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-INTERACTING
BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factor |
chr1:9087214-9089035 FORWARD
Length = 340
Score = 54 bits (127), Expect = 9e-008
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -1
Query: 501 ERTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFN 379
++ G AVMLD +I+YVQSLQ QIEFLSMKLSA + DFN
Sbjct: 209 DKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFN 249
>TAIR9_protein||AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:25915620-25917675 FORWARD
Length = 487
Score = 52 bits (123), Expect = 3e-007
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = -1
Query: 498 RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFNSPG 370
+ G AVMLD +I+YVQSLQ Q+EFLSMKL+ + DFN G
Sbjct: 341 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEG 383
>TAIR9_protein||AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:25915620-25917675 FORWARD
Length = 487
Score = 52 bits (123), Expect = 3e-007
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = -1
Query: 498 RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFNSPG 370
+ G AVMLD +I+YVQSLQ Q+EFLSMKL+ + DFN G
Sbjct: 341 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEG 383
>TAIR9_protein||AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:25915620-25917675 FORWARD
Length = 486
Score = 52 bits (123), Expect = 3e-007
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = -1
Query: 498 RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFNSPG 370
+ G AVMLD +I+YVQSLQ Q+EFLSMKL+ + DFN G
Sbjct: 340 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEG 382
>TAIR9_protein||AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:2341188-2343288 REVERSE
Length = 457
Score = 52 bits (122), Expect = 3e-007
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = -1
Query: 498 RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYDFN 379
+ G A+MLD +I+YVQSLQ Q+EFLSMKLS+ + DFN
Sbjct: 296 KVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFN 335
Score = 48 bits (112), Expect = 5e-006
Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Frame = -1
Query: 603 KRKRSNSD--KDMDKPKEVIHVRAKRGQATDSHSLAER 496
K+ N D K +D K+ IHVRA+RGQATDSHSLAER
Sbjct: 237 KKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAER 274
>TAIR9_protein||AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:19684160-19686871 FORWARD
Length = 499
Score = 51 bits (121), Expect = 4e-007
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -1
Query: 612 GGRKRKRSNSDKDMDKPKEVIHVRAKRGQATDSHSLAER 496
G + +SN+ K + PK+ IHVRA+RGQATDSHSLAER
Sbjct: 279 GEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAER 317
Score = 47 bits (110), Expect = 8e-006
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = -1
Query: 498 RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAAS-LYYDFN 379
+ G A+MLD +I+YVQSLQ Q+EFLSMKLS+ + DFN
Sbjct: 339 KVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFN 379
>TAIR9_protein||AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:8528933-8530655 REVERSE
Length = 372
Score = 51 bits (120), Expect = 6e-007
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Frame = -1
Query: 543 RAKRGQATDSHSLAE-------RTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAASLYYD 385
RA+R + ++ +L + R G AVMLD +I+YVQSLQ Q+EFLSMKL+ + +
Sbjct: 207 RARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRME 266
Query: 384 FNS 376
FN+
Sbjct: 267 FNA 269
Score = 47 bits (110), Expect = 8e-006
Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Frame = -1
Query: 597 KRSNSD--KDMDKPKEVIHVRAKRGQATDSHSLAER 496
K N D K + PK+ IHVRA+RGQATDSHSLAER
Sbjct: 172 KGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAER 207
>TAIR9_protein||AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:20710764-20712252 REVERSE
Length = 287
Score = 51 bits (120), Expect = 6e-007
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = -1
Query: 609 GRKRKRSNSDKDMDKPKEVIHVRAKRGQATDSHSLAERTMGMAVMLDVVISYVQSLQNQI 430
GRK K+ + P + IHVRA+RGQATDSHSLAER V + + +++LQN +
Sbjct: 115 GRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAER-----VRREKISERMRTLQNLV 169
Score = 50 bits (117), Expect = 1e-006
Identities = 24/43 (55%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Frame = -1
Query: 501 ERTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAAS-LYYDFNS 376
++ G A+MLD +I+YVQ+LQ Q+EFLSMKL++ S + YDF S
Sbjct: 173 DKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGS 215
>TAIR9_protein||AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:20710764-20712252 REVERSE
Length = 287
Score = 51 bits (120), Expect = 6e-007
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = -1
Query: 609 GRKRKRSNSDKDMDKPKEVIHVRAKRGQATDSHSLAERTMGMAVMLDVVISYVQSLQNQI 430
GRK K+ + P + IHVRA+RGQATDSHSLAER V + + +++LQN +
Sbjct: 115 GRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAER-----VRREKISERMRTLQNLV 169
Score = 50 bits (117), Expect = 1e-006
Identities = 24/43 (55%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Frame = -1
Query: 501 ERTMGMAVMLDVVISYVQSLQNQIEFLSMKLSAAS-LYYDFNS 376
++ G A+MLD +I+YVQ+LQ Q+EFLSMKL++ S + YDF S
Sbjct: 173 DKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGS 215
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,010,346,573
Number of Sequences: 33410
Number of Extensions: 1010346573
Number of Successful Extensions: 51525802
Number of sequences better than 0.0: 0
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