BLASTX 7.6.2
Query= RU03675 /QuerySize=850
(849 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G42960.1 | Symbols: | expressed protein local... 162 4e-040
TAIR9_protein||AT5G16660.1 | Symbols: | unknown protein | chr5:... 89 3e-018
TAIR9_protein||AT5G16660.2 | Symbols: | unknown protein | chr5:... 84 8e-017
TAIR9_protein||AT3G02900.1 | Symbols: | unknown protein | chr3:... 72 3e-013
>TAIR9_protein||AT1G42960.1 | Symbols: | expressed protein localized to the
inner membrane of the chloroplast. | chr1:16125863-16127080 FORWARD
Length = 169
Score = 162 bits (408), Expect = 4e-040
Identities = 86/169 (50%), Positives = 114/169 (67%), Gaps = 10/169 (5%)
Frame = -1
Query: 765 SAISNSLALTTN------ASGSSLKQAQQCLGFMAPTNLSLNSNRAGNVQLSSSNRSFAV 604
S S SL+L N +SG SL +C+ + LN + ++ + R +
Sbjct: 3 SLSSTSLSLPKNSHQLHPSSGFSLNPNARCVS----VSFGLNHSNKLHISAPRTKRILTI 58
Query: 603 RASYSDGGRSNSGSIFISGFVLGGLIVGTLGCVYAPQISKTLAGADRKELMRKLPNFLYD 424
+++Y D S S +F+ GF+LGGLIVG LGCVYAPQISK +AGADRK+LMRKLP F+YD
Sbjct: 59 QSAYRDDDGSGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGADRKDLMRKLPKFIYD 118
Query: 423 EEKEVEKTRKVLAEKIAQLNSAIDGVSGQLRTKEEPDEVPVSADDVEAT 277
EEK +EKTRKVLAEKIAQLNSAID VS QL++++ P+ +S D++EAT
Sbjct: 119 EEKALEKTRKVLAEKIAQLNSAIDDVSSQLKSEDTPNGAALSTDEIEAT 167
>TAIR9_protein||AT5G16660.1 | Symbols: | unknown protein | chr5:5465699-5467006
REVERSE
Length = 169
Score = 89 bits (219), Expect = 3e-018
Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Frame = -1
Query: 630 SSSNRSFAVRASYSDGGRSNSGSIFISGFVLGGLIVGTLGCVYAPQISKTLAGADRKELM 451
S+ R F+V A Y DG RS S FI+GF+LGG + G + ++APQI +++ + +
Sbjct: 47 SNRTRKFSVSAGYRDGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGF 106
Query: 450 RKLPNFLYDEEKEVEKTRKVLAEKIAQLNSAIDGVSGQLRTKEEPD---EVPVSAD-DVE 283
K Y +E +EKTR+ L EKI QLNSAID VS +LR +E+ VPV D +VE
Sbjct: 107 EKPKQPTYYDE-GLEKTRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVETDPEVE 165
Query: 282 AT 277
AT
Sbjct: 166 AT 167
>TAIR9_protein||AT5G16660.2 | Symbols: | unknown protein | chr5:5465699-5467006
REVERSE
Length = 167
Score = 84 bits (207), Expect = 8e-017
Identities = 59/154 (38%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Frame = -1
Query: 726 SGSSLKQAQQCLGFMAPTNLSLNSNRAGNVQLSSSNRSFAVRASYSDGGRSNSGSIFISG 547
SG S + G T LS + SNR+ S DG RS S FI+G
Sbjct: 13 SGVSQSHYVKANGLSTTTKLSSICKTSDLTIHKKSNRTRKFSVSAGDGSRSGSSGDFIAG 72
Query: 546 FVLGGLIVGTLGCVYAPQISKTLAGADRKELMRKLPNFLYDEEKEVEKTRKVLAEKIAQL 367
F+LGG + G + ++APQI +++ + + K Y +E +EKTR+ L EKI QL
Sbjct: 73 FLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE-GLEKTRETLNEKIGQL 131
Query: 366 NSAIDGVSGQLRTKEEPD---EVPVSAD-DVEAT 277
NSAID VS +LR +E+ VPV D +VEAT
Sbjct: 132 NSAIDNVSSRLRGREKNTSSLNVPVETDPEVEAT 165
>TAIR9_protein||AT3G02900.1 | Symbols: | unknown protein | chr3:645850-647445
FORWARD
Length = 163
Score = 72 bits (176), Expect = 3e-013
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Frame = -1
Query: 630 SSSNRS--FAVRASYSDGGRSNSGSIFISGFVLGGLIVGTLGCVYAPQISKTLAGADRKE 457
+ SNRS +V A Y G + S F++GF+LG + GTL ++APQI +++ +
Sbjct: 36 TKSNRSHKLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYG 95
Query: 456 LMRKLPNFLYDEEKEVEKTRKVLAEKIAQLNSAIDGVSGQLR-------TKEEPDEVPVS 298
+ YDE +E+ R++L EKI QLNSAID VS +L+ VPV
Sbjct: 96 FKKPEQPMYYDE--GLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSVPVE 153
Query: 297 AD-DVEAT 277
D + EAT
Sbjct: 154 TDAEAEAT 161
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,010,346,573
Number of Sequences: 33410
Number of Extensions: 1010346573
Number of Successful Extensions: 51525802
Number of sequences better than 0.0: 0
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