BLASTX 7.6.2
Query= RU03701 /QuerySize=1595
(1594 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA b... 466 2e-131
TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-b... 425 5e-119
TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-bin... 389 3e-108
TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 ... 353 2e-097
TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabi... 349 5e-096
TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-bin... 335 7e-092
TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABI... 332 6e-091
TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA... 330 2e-090
TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 ... 260 2e-069
TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-b... 236 4e-062
TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABI... 222 5e-058
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 70 3e-012
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 70 4e-012
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 69 6e-012
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 69 6e-012
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 66 6e-011
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 66 6e-011
TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related... 54 2e-007
TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related... 54 2e-007
TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related... 54 2e-007
>TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA binding |
chr4:13554983-13557763 REVERSE
Length = 416
Score = 466 bits (1199), Expect = 2e-131
Identities = 229/319 (71%), Positives = 259/319 (81%), Gaps = 7/319 (2%)
Frame = -3
Query: 1280 EIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAEQV 1101
EIRSLWIGDL PWMDENY++N FG TGEA AKVIRNKQ G EGYGFIEF + AE+
Sbjct: 78 EIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERN 137
Query: 1100 LQNYNGTVMPSTEQNFRLNWATLGAGERRQDDGPDYTVFVGDLAADVTDYTLQETFRAHY 921
LQ YNG MPS+EQ FRLNWA LGAGERRQ +GP++TVFVGDLA DVTD+ L ETF+A Y
Sbjct: 138 LQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVY 197
Query: 920 HSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKKPVG 741
SVKGAKVV DRTTGRSKGYGFVRF DESEQ+RAM EMNGQ+CSSRPMR GPAA KKP+
Sbjct: 198 SSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPL- 256
Query: 740 GGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKIPVGK 561
Q A+Y ++QGN GE+DP NTTIFVG +D SV ++ L+ FG FGELVHVKIP GK
Sbjct: 257 ---TMQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGK 313
Query: 560 RCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQTQWNGAGGAGFYQ 381
RCGFVQ+ANRACAEQALSV+NG +G QS+RLSWGRSPS+KQ QP+Q Q+ GG G+Y
Sbjct: 314 RCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQY--GGGGGYYG 371
Query: 380 Y-PQGYDAYTYAPPTQDPN 327
Y PQGY+AY YAPP QDPN
Sbjct: 372 YPPQGYEAYGYAPPPQDPN 390
>TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-binding protein
45A); RNA binding | chr5:22295412-22298126 FORWARD
Length = 388
Score = 425 bits (1091), Expect = 5e-119
Identities = 211/322 (65%), Positives = 248/322 (77%), Gaps = 9/322 (2%)
Frame = -3
Query: 1286 SDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
+ +++SLWIGDL WMDENYI++ F +GEA +AKVIRNK TG EGYGFIEF + S AE
Sbjct: 56 ASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAE 115
Query: 1106 QVLQNYNGTVMPSTEQNFRLNWATLGAGERR-QDDGPDYTVFVGDLAADVTDYTLQETFR 930
+VLQ YNG MPSTEQ FRLNWA GAGE+R Q +GPD+T+FVGDLA +VTDY L +TF+
Sbjct: 116 RVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFK 175
Query: 929 AHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKK 750
Y SVKGAKVV DRTTGRSKGYGFVRF DE+EQ+RAM EMNGQ+CS+RPMRIGPAA K
Sbjct: 176 NVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKN 235
Query: 749 PVGGGQPFQKAAYPSSQG-NPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKI 573
+ P Q A Y ++QG N G+ DPNNTTIFVGGLD +V D+ L+ FG FGEL+HVKI
Sbjct: 236 AL----PMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKI 291
Query: 572 PVGKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQTQWNGAGGA 393
P GKRCGFVQ+AN+A AE ALSV+NG +G QS+RLSWGRSP+ Q +Q QWNG G
Sbjct: 292 PPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPN---KQSDQAQWNGGGYY 348
Query: 392 GFYQYPQGYDAYTYAPPTQDPN 327
G+ PQG Y PPTQDPN
Sbjct: 349 GYPPQPQGGYGYAAQPPTQDPN 370
>TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917941 FORWARD
Length = 406
Score = 389 bits (999), Expect = 3e-108
Identities = 203/323 (62%), Positives = 243/323 (75%), Gaps = 17/323 (5%)
Frame = -3
Query: 1286 SDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
+DEIR+LWIGDL WMDEN++ CF TGE V+AKVIRNKQTG EGYGFIEF + +AAE
Sbjct: 58 ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAE 117
Query: 1106 QVLQNYNGTVMPS-TEQNFRLNWATLGAGERRQDDGPDYTVFVGDLAADVTDYTLQETFR 930
+VLQ +N +PS +Q FRLNWA+L +G++R DD PDYT+FVGDLAADVTDY L ETFR
Sbjct: 118 RVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETFR 176
Query: 929 AHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKK 750
A Y SVKGAKVV DR TGR+KGYGFVRF DESEQ+RAM EMNG CS+RPMRIGPAA+KK
Sbjct: 177 ASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK 236
Query: 749 PVGGGQPFQKAAYPSS-QGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKI 573
V G Q+ +Y SS G + DPNNTT+FVGGLD SV D+ L+ F +GE+VHVKI
Sbjct: 237 GVTG----QRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKI 292
Query: 572 PVGKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQN-QPEQTQWNGAGG 396
P GKRCGFVQF+ ++CAE+AL ++NG +G +VRLSWGRSPS+KQ+ P Q + G
Sbjct: 293 PAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQSGDPSQFYYGG--- 349
Query: 395 AGFYQYPQGYDAYTYAPPTQDPN 327
Y QG + Y Y P QDPN
Sbjct: 350 -----YGQGQEQYGYTMP-QDPN 366
>TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 422
Score = 353 bits (905), Expect = 2e-097
Identities = 182/330 (55%), Positives = 230/330 (69%), Gaps = 17/330 (5%)
Frame = -3
Query: 1283 DEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAEQ 1104
+E+R+LWIGDL W+DENY+ +CF TGE V+ KVIRNK TG PEGYGFIEF + +AAE+
Sbjct: 21 EEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAER 80
Query: 1103 VLQNYNGTVMPSTEQNFRLNWATLGAGERRQDDGPDYTVFVGDLAADVTDYTLQETFRAH 924
LQ YNGT MP TE FRLNWA+ G+G+ + D GPD+++FVGDLA DVTDY LQETFR H
Sbjct: 81 TLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTDYLLQETFRVH 139
Query: 923 YHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKKPV 744
Y SV+GAKVVTD +TGRSKGYGFV+F +ESE+ RAM EMNG +CS+RPMRI A KK V
Sbjct: 140 YSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNV 199
Query: 743 GGGQPF-QKAAYPSSQG-------NPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGEL 588
G Q + K PS+ P E+D TTI V LD +V +E L+++F GE+
Sbjct: 200 GVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEV 259
Query: 587 VHVKIPVGKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSK--QNQPEQTQ 414
++VKIP K G+VQF R AE+A+ M G+V+G Q+VR+SW ++P Q + Q
Sbjct: 260 IYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQ 319
Query: 413 WNGAGGAGFYQYPQGYDAYTYAPPTQDPNL 324
WN G+Y Y QGYDAY Y TQDP++
Sbjct: 320 WN-----GYYGYGQGYDAYAYG-ATQDPSV 343
>TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabidopsis thaliana
RNA-binding protein 47a); RNA binding | chr1:18357236-18360150 REVERSE
Length = 446
Score = 349 bits (893), Expect = 5e-096
Identities = 175/315 (55%), Positives = 214/315 (67%), Gaps = 11/315 (3%)
Frame = -3
Query: 1289 GSDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAA 1110
G D++++LW+GDLL WMDE Y+ CF T E + KVIRNKQT EGYGF+EF +RSAA
Sbjct: 114 GGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAA 173
Query: 1109 EQVLQNYNGTVMPSTEQNFRLNWATLGAGERR-QDDGPDYTVFVGDLAADVTDYTLQETF 933
E+ LQ+++G MP+ EQ FRLNWA+ GE+R ++GPD ++FVGDLA DV+D L ETF
Sbjct: 174 EEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETF 233
Query: 932 RAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATK 753
Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ RAM EMNG FCSSR MR+G A K
Sbjct: 234 AGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPK 293
Query: 752 KPV-----GGGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGEL 588
+ G Q A G+ + + NN+TIFVGGLD V +E L Q F FGE+
Sbjct: 294 RAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEV 353
Query: 587 VHVKIPVGKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQTQWN 408
V VKIPVGK CGFVQFANR AE+A+ +NG V+G +VRLSWGRSP+ + QWN
Sbjct: 354 VSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWN 413
Query: 407 GAGGAGFYQYPQGYD 363
G Y QGY+
Sbjct: 414 GG-----YSRGQGYN 423
>TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917301 FORWARD
Length = 307
Score = 335 bits (857), Expect = 7e-092
Identities = 170/254 (66%), Positives = 200/254 (78%), Gaps = 7/254 (2%)
Frame = -3
Query: 1286 SDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
+DEIR+LWIGDL WMDEN++ CF TGE V+AKVIRNKQTG EGYGFIEF + +AAE
Sbjct: 58 ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAE 117
Query: 1106 QVLQNYNGTVMPS-TEQNFRLNWATLGAGERRQDDGPDYTVFVGDLAADVTDYTLQETFR 930
+VLQ +N +PS +Q FRLNWA+L +G++R DD PDYT+FVGDLAADVTDY L ETFR
Sbjct: 118 RVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETFR 176
Query: 929 AHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKK 750
A Y SVKGAKVV DR TGR+KGYGFVRF DESEQ+RAM EMNG CS+RPMRIGPAA+KK
Sbjct: 177 ASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK 236
Query: 749 PVGGGQPFQKAAYPSS-QGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKI 573
V G Q+ +Y SS G + DPNNTT+FVGGLD SV D+ L+ F +GE+VHVKI
Sbjct: 237 GVTG----QRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKI 292
Query: 572 PVGKRCGFVQFANR 531
P GKRCGFVQF+ +
Sbjct: 293 PAGKRCGFVQFSEK 306
>TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17427182 FORWARD
Length = 433
Score = 332 bits (849), Expect = 6e-091
Identities = 176/323 (54%), Positives = 218/323 (67%), Gaps = 11/323 (3%)
Frame = -3
Query: 1280 EIRSLWIGDLLPWMDENYILNCF--GPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
E +++W+GDL WMDE Y+ + F G E V+ KVIRNK GL EGYGF+EF + A+
Sbjct: 99 ENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVAD 158
Query: 1106 QVLQNYNGTVMPSTEQNFRLNWATLGAGERR-QDDGPDYTVFVGDLAADVTDYTLQETFR 930
+VL+ +NGT MP+T+Q FRLNWA+ GE+R +++GPD ++FVGDL+ DV+D L ETF
Sbjct: 159 KVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFS 218
Query: 929 AHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKK 750
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ +AM EMNG CSSR MRIGPA +K
Sbjct: 219 EKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK 278
Query: 749 PVGGGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKIP 570
G Q Q P+ E D NTTIFVGGLD SV DE L+Q F FGE+V VKIP
Sbjct: 279 TNGYQQ--QGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIP 336
Query: 569 VGKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQ-TQWNGAGGA 393
VGK CGFVQF NR AE+AL +NG V+G Q+VRLSWGR+P++KQ + + QW
Sbjct: 337 VGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW-----V 391
Query: 392 GFYQYPQGYDAYTYAPPTQDPNL 324
Y Q Y+ Y Y P DP +
Sbjct: 392 DPYYGGQFYNGYGYMVPQPDPRM 414
>TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA-binding
protein 47C'); RNA binding | chr1:17432682-17434805 FORWARD
Length = 435
Score = 330 bits (845), Expect = 2e-090
Identities = 176/323 (54%), Positives = 215/323 (66%), Gaps = 11/323 (3%)
Frame = -3
Query: 1280 EIRSLWIGDLLPWMDENYILNCF--GPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
E +++W+GDL WMDE Y+ + F E V+ KVIRNK G EGYGF+EF + A+
Sbjct: 101 ENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVAD 160
Query: 1106 QVLQNYNGTVMPSTEQNFRLNWATLGAGERR-QDDGPDYTVFVGDLAADVTDYTLQETFR 930
+VLQ +NG MP+T+Q FRLNWA+ GE+R +++GPD ++FVGDLA DV+D L ETF
Sbjct: 161 KVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFS 220
Query: 929 AHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKK 750
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ +AM EMNG CSSR MRIGPA +K
Sbjct: 221 EKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK 280
Query: 749 PVGGGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKIP 570
G Q Q PS E D NTTIFVGGLD SV DE L+Q F FGE+V VKIP
Sbjct: 281 TNGYQQ--QGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIP 338
Query: 569 VGKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQ-TQWNGAGGA 393
VGK CGFVQF NR AE+AL +NG V+G Q+VRLSWGR+P++KQ + + QW
Sbjct: 339 VGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW-----V 393
Query: 392 GFYQYPQGYDAYTYAPPTQDPNL 324
Y Q Y+ Y Y P DP +
Sbjct: 394 DPYYGGQFYNGYGYMVPQPDPRM 416
>TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 426
Score = 260 bits (664), Expect = 2e-069
Identities = 127/193 (65%), Positives = 152/193 (78%), Gaps = 2/193 (1%)
Frame = -3
Query: 1283 DEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAEQ 1104
+E+R+LWIGDL W+DENY+ +CF TGE V+ KVIRNK TG PEGYGFIEF + +AAE+
Sbjct: 21 EEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAER 80
Query: 1103 VLQNYNGTVMPSTEQNFRLNWATLGAGERRQDDGPDYTVFVGDLAADVTDYTLQETFRAH 924
LQ YNGT MP TE FRLNWA+ G+G+ + D GPD+++FVGDLA DVTDY LQETFR H
Sbjct: 81 TLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTDYLLQETFRVH 139
Query: 923 YHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKKPV 744
Y SV+GAKVVTD +TGRSKGYGFV+F +ESE+ RAM EMNG +CS+RPMRI A KK V
Sbjct: 140 YSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNV 199
Query: 743 GGGQPF-QKAAYP 708
G Q + KA YP
Sbjct: 200 GVQQQYVTKAVYP 212
Score = 109 bits (270), Expect = 9e-024
Identities = 56/125 (44%), Positives = 78/125 (62%), Gaps = 8/125 (6%)
Frame = -3
Query: 692 PGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKIPVGKRCGFVQFANRACAEQA 513
P E+D TTI V LD +V +E L+++F GE+++VKIP K G+VQF R AE+A
Sbjct: 229 PPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEA 288
Query: 512 LSVMNGRVVGSQSVRLSWGRSPSSK--QNQPEQTQWNGAGGAGFYQYPQGYDAYTYAPPT 339
+ M G+V+G Q+VR+SW ++P Q + QWN G+Y Y QGYDAY Y T
Sbjct: 289 VQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWN-----GYYGYGQGYDAYAYG-AT 342
Query: 338 QDPNL 324
QDP++
Sbjct: 343 QDPSV 347
>TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-binding protein
47B); RNA binding | chr3:6611398-6613823 REVERSE
Length = 436
Score = 236 bits (601), Expect = 4e-062
Identities = 111/191 (58%), Positives = 143/191 (74%), Gaps = 1/191 (0%)
Frame = -3
Query: 1283 DEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAEQ 1104
D++++LW+GDLL WMDE Y+ +CF TGE + KVIRNK T EGYGF+EF +R+AAE+
Sbjct: 105 DDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEE 164
Query: 1103 VLQNYNGTVMPSTEQNFRLNWATLGAGERRQ-DDGPDYTVFVGDLAADVTDYTLQETFRA 927
VLQNY+G+VMP+++Q FR+NWA+ GE+R ++GPD +VFVGDL+ DVTD L ETF
Sbjct: 165 VLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSD 224
Query: 926 HYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKKP 747
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ RA+ EMNG +CS+R MR+G A K+
Sbjct: 225 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRA 284
Query: 746 VGGGQPFQKAA 714
+ Q A
Sbjct: 285 IANQQQHSSQA 295
Score = 121 bits (302), Expect = 2e-027
Identities = 60/112 (53%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = -3
Query: 698 GNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKIPVGKRCGFVQFANRACAE 519
G+ + + N TIFVGG+DP V DE LRQ F FGE+V VKIPVGK CGFVQFA+R AE
Sbjct: 311 GSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAE 370
Query: 518 QALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQTQWNGAGGAGF-YQYPQGY 366
A+ +NG V+G +VRLSWGRSP+ + QWNG G Y GY
Sbjct: 371 DAIESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGHGYNNGGGY 422
>TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17426114 FORWARD
Length = 311
Score = 222 bits (565), Expect = 5e-058
Identities = 115/212 (54%), Positives = 145/212 (68%), Gaps = 5/212 (2%)
Frame = -3
Query: 1280 EIRSLWIGDLLPWMDENYILNCF--GPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
E +++W+GDL WMDE Y+ + F G E V+ KVIRNK GL EGYGF+EF + A+
Sbjct: 99 ENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVAD 158
Query: 1106 QVLQNYNGTVMPSTEQNFRLNWATLGAGERR-QDDGPDYTVFVGDLAADVTDYTLQETFR 930
+VL+ +NGT MP+T+Q FRLNWA+ GE+R +++GPD ++FVGDL+ DV+D L ETF
Sbjct: 159 KVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFS 218
Query: 929 AHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKK 750
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ +AM EMNG CSSR MRIGPA +K
Sbjct: 219 EKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK 278
Query: 749 PVGGGQPFQKAAYPSSQGNPGEADPNNTTIFV 654
G Q Q P+ E D NTT+ V
Sbjct: 279 TNGYQQ--QGGYMPNGTLTRPEGDIMNTTVIV 308
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 70 bits (171), Expect = 3e-012
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = -3
Query: 989 VFVGDLAADVTDYTLQETFRAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNE 810
+F+G L+ D +L++ F AH+ V AKV+ DR TGRS+G+GFV F DE A++E
Sbjct: 37 LFIGGLSWGTDDASLRDAF-AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 809 MNGQFCSSRPMRIGPAATKKPVGG 738
M+G+ + R +R+ P A +P GG
Sbjct: 96 MDGKELNGRHIRVNP-ANDRPSGG 118
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 70 bits (169), Expect = 4e-012
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Frame = -3
Query: 989 VFVGDLAADVTDYTLQETFRAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNE 810
+F+G L+ D +L++ F AH+ V AKV+ DR TGRS+G+GFV F DE A++E
Sbjct: 37 LFIGGLSWGTDDASLRDAF-AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 809 MNGQFCSSRPMRIGPA----ATKKPVGGGQPFQKAAYPSSQGNPG 687
M+G+ + R +R+ PA + + GGG + G G
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAYGGGGGYSYGGGGGGYGGGG 140
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 69 bits (168), Expect = 6e-012
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Frame = -3
Query: 989 VFVGDLAADVTDYTLQETFRAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNE 810
+F+G L+ D +L++ F AH+ V AKV+ DR TGRS+G+GFV F DE A++E
Sbjct: 37 LFIGGLSWGTDDASLRDAF-AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 809 MNGQFCSSRPMRIGPA----ATKKPVGGG 735
M+G+ + R +R+ PA + + GGG
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAYGGG 124
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 69 bits (168), Expect = 6e-012
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Frame = -3
Query: 989 VFVGDLAADVTDYTLQETFRAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNE 810
+F+G L+ D +L++ F AH+ V AKV+ DR TGRS+G+GFV F DE A++E
Sbjct: 37 LFIGGLSWGTDDASLRDAF-AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 809 MNGQFCSSRPMRIGPA----ATKKPVGGG 735
M+G+ + R +R+ PA + + GGG
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAYGGG 124
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 66 bits (159), Expect = 6e-011
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = -3
Query: 998 DYTVFVGDLAADVTDYTLQETFRAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRA 819
+Y FVG LA D L+ F A Y V +K++ DR TGRS+G+GFV F DE A
Sbjct: 7 EYRCFVGGLAWATDDRALETAF-AQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDA 65
Query: 818 MNEMNGQFCSSRPMRIGPAATKKPVGGG 735
+ MNGQ R + + A ++ GGG
Sbjct: 66 IEGMNGQDLDGRSITVNEAQSRGSGGGG 93
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 66 bits (159), Expect = 6e-011
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = -3
Query: 998 DYTVFVGDLAADVTDYTLQETFRAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRA 819
+Y FVG LA D L+ F A Y V +K++ DR TGRS+G+GFV F DE A
Sbjct: 7 EYRCFVGGLAWATDDRALETAF-AQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDA 65
Query: 818 MNEMNGQFCSSRPMRIGPAATKKPVGGG 735
+ MNGQ R + + A ++ GGG
Sbjct: 66 IEGMNGQDLDGRSITVNEAQSRGSGGGG 93
>TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 54 bits (128), Expect = 2e-007
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = -3
Query: 1271 SLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAEQVLQN 1092
+L+IG L P ++++ ++N F GE V AKVI+++ TGL +GYGF+++ A +Q
Sbjct: 481 NLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQA 540
Query: 1091 YNG 1083
NG
Sbjct: 541 MNG 543
>TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 54 bits (128), Expect = 2e-007
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = -3
Query: 1271 SLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAEQVLQN 1092
+L+IG L P ++++ ++N F GE V AKVI+++ TGL +GYGF+++ A +Q
Sbjct: 481 NLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQA 540
Query: 1091 YNG 1083
NG
Sbjct: 541 MNG 543
>TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 54 bits (128), Expect = 2e-007
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = -3
Query: 1271 SLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAEQVLQN 1092
+L+IG L P ++++ ++N F GE V AKVI+++ TGL +GYGF+++ A +Q
Sbjct: 481 NLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQA 540
Query: 1091 YNG 1083
NG
Sbjct: 541 MNG 543
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,010,346,573
Number of Sequences: 33410
Number of Extensions: 1010346573
Number of Successful Extensions: 51525802
Number of sequences better than 0.0: 0
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