BLASTX 7.6.2
Query= RU03715 /QuerySize=869
(868 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G04630.1 | Symbols: WDL1 | WDL1 | chr3:1259231... 78 7e-015
TAIR9_protein||AT3G04630.2 | Symbols: WDL1 | WDL1 | chr3:1259231... 78 7e-015
TAIR9_protein||AT3G04630.3 | Symbols: WDL1 | WDL1 | chr3:1259231... 78 7e-015
TAIR9_protein||AT1G54460.1 | Symbols: | FUNCTIONS IN: molecular... 71 7e-013
TAIR9_protein||AT5G28646.1 | Symbols: WVD2 | WVD2 | chr5:1067519... 67 1e-011
TAIR9_protein||AT5G28646.2 | Symbols: WVD2 | WVD2 | chr5:1067519... 67 1e-011
TAIR9_protein||AT3G23090.1 | Symbols: | FUNCTIONS IN: molecular... 62 4e-010
TAIR9_protein||AT1G70950.1 | Symbols: | FUNCTIONS IN: molecular... 48 8e-006
>TAIR9_protein||AT3G04630.1 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652
FORWARD
Length = 288
Score = 78 bits (190), Expect = 7e-015
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 610 DTKKHAEEEDNWSLTSSTAASVRTNKFKVTVGQAPSFKCSERAQKRNEYYSXXXXXXXXX 789
+ KKH ++EDN S+ SS A S+R K +T G AP+F+ ++RA+KR EYY
Sbjct: 93 ENKKHIDDEDNCSIASSVATSMRMGKSGLTYGSAPTFRSAQRAEKRKEYYQKLEEKNQAL 152
Query: 790 XXXXXXYESRTREEQEAAIKQMRKSL 867
E R ++EQEAA+KQ+RK+L
Sbjct: 153 EAERNELEQRQKDEQEAALKQLRKNL 178
>TAIR9_protein||AT3G04630.2 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652
FORWARD
Length = 287
Score = 78 bits (190), Expect = 7e-015
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 610 DTKKHAEEEDNWSLTSSTAASVRTNKFKVTVGQAPSFKCSERAQKRNEYYSXXXXXXXXX 789
+ KKH ++EDN S+ SS A S+R K +T G AP+F+ ++RA+KR EYY
Sbjct: 92 ENKKHIDDEDNCSIASSVATSMRMGKSGLTYGSAPTFRSAQRAEKRKEYYQKLEEKNQAL 151
Query: 790 XXXXXXYESRTREEQEAAIKQMRKSL 867
E R ++EQEAA+KQ+RK+L
Sbjct: 152 EAERNELEQRQKDEQEAALKQLRKNL 177
>TAIR9_protein||AT3G04630.3 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652
FORWARD
Length = 287
Score = 78 bits (190), Expect = 7e-015
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 610 DTKKHAEEEDNWSLTSSTAASVRTNKFKVTVGQAPSFKCSERAQKRNEYYSXXXXXXXXX 789
+ KKH ++EDN S+ SS A S+R K +T G AP+F+ ++RA+KR EYY
Sbjct: 92 ENKKHIDDEDNCSIASSVATSMRMGKSGLTYGSAPTFRSAQRAEKRKEYYQKLEEKNQAL 151
Query: 790 XXXXXXYESRTREEQEAAIKQMRKSL 867
E R ++EQEAA+KQ+RK+L
Sbjct: 152 EAERNELEQRQKDEQEAALKQLRKNL 177
>TAIR9_protein||AT1G54460.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana
protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375
proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi
- 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI
BLink). | chr1:20340907-20342900 REVERSE
Length = 339
Score = 71 bits (173), Expect = 7e-013
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = +1
Query: 610 DTKKHAEEEDNWSLTSSTAASVRTNKFKVTVGQAPSFKCSERAQKRNEYYSXXXXXXXXX 789
D K H +EED++S+ SS+A S+R+ K K+T+G AP+F + R ++R E+Y
Sbjct: 131 DHKMHHDEEDSFSVASSSATSIRSFKPKITIGVAPTFSSTSRLERRREFYQKLEEKQKAL 190
Query: 790 XXXXXXYESRTREEQEAAIKQMRKSL 867
E R +EEQEA KQ+RK++
Sbjct: 191 EAEKRENEKRLKEEQEAVTKQLRKNM 216
>TAIR9_protein||AT5G28646.1 | Symbols: WVD2 | WVD2 | chr5:10675192-10676151
FORWARD
Length = 203
Score = 67 bits (162), Expect = 1e-011
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +1
Query: 616 KKHAEEEDNWSLTSSTAASVRTNKFKVTVGQAPSFKCSERAQKRNEYYSXXXXXXXXXXX 795
KK+ +EED+ S A+S++ K KVT G AP F+ ++RA+KR EYY
Sbjct: 59 KKNLDEEDD----CSVASSMKNAKSKVTHGTAPRFRSAQRAEKRKEYYQKLEEKHQALEA 114
Query: 796 XXXXYESRTREEQEAAIKQMRKSL 867
E R +EEQEAAIKQ+RK+L
Sbjct: 115 ERIELEQRQKEEQEAAIKQLRKNL 138
>TAIR9_protein||AT5G28646.2 | Symbols: WVD2 | WVD2 | chr5:10675192-10676151
FORWARD
Length = 203
Score = 67 bits (162), Expect = 1e-011
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +1
Query: 616 KKHAEEEDNWSLTSSTAASVRTNKFKVTVGQAPSFKCSERAQKRNEYYSXXXXXXXXXXX 795
KK+ +EED+ S A+S++ K KVT G AP F+ ++RA+KR EYY
Sbjct: 59 KKNLDEEDD----CSVASSMKNAKSKVTHGTAPRFRSAQRAEKRKEYYQKLEEKHQALEA 114
Query: 796 XXXXYESRTREEQEAAIKQMRKSL 867
E R +EEQEAAIKQ+RK+L
Sbjct: 115 ERIELEQRQKEEQEAAIKQLRKNL 138
>TAIR9_protein||AT3G23090.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: inflorescence meristem, leaf
apex, hypocotyl, flower, root; EXPRESSED DURING: petal differentiation
and expansion stage; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1
(TAIR:AT3G04630.3); Has 483 Blast hits to 450 proteins in 87 species:
Archae - 2; Bacteria - 15; Metazoa - 188; Fungi - 17; Plants - 148;
Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). |
chr3:8214533-8216983 REVERSE
Length = 339
Score = 62 bits (149), Expect = 4e-010
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +1
Query: 616 KKHAEEEDNWSLTSSTAASVRTNKFKVTVGQAPSFKCSERAQKRNEYYSXXXXXXXXXXX 795
KK ++EED+ S+ S + ++ K + V APSF+ +ERA+KR E+Y+
Sbjct: 162 KKLSDEEDSCSVASYATSGAKSAKSRTVVTAAPSFRSTERAEKRKEFYTKLEEKHQAMEA 221
Query: 796 XXXXYESRTREEQEAAIKQMRKSL 867
E+R +E EAA++Q+RKSL
Sbjct: 222 EKTQSEARNKEATEAALRQLRKSL 245
>TAIR9_protein||AT1G70950.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G23060.1); Has 875 Blast hits to 771 proteins in 143 species:
Archae - 0; Bacteria - 102; Metazoa - 281; Fungi - 65; Plants - 205;
Viruses - 3; Other Eukaryotes - 219 (source: NCBI BLink). |
chr1:26752779-26755242 FORWARD
Length = 479
Score = 48 bits (112), Expect = 8e-006
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 652 TSSTAASVRTNKFKVTVGQAP-SFKCSERAQKRNEYYSXXXXXXXXXXXXXXXYESRTRE 828
T+ S ++K +++ G FKCSERA+KR E+Y +++T++
Sbjct: 307 TNRCKTSTTSSKLEMSTGSTSFRFKCSERAEKRKEFYMKLEEKIHAKKTETNQVQAKTQQ 366
Query: 829 EQEAAIKQMRKSL 867
+ EA IKQ RKSL
Sbjct: 367 KAEAEIKQFRKSL 379
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,010,346,573
Number of Sequences: 33410
Number of Extensions: 1010346573
Number of Successful Extensions: 51525802
Number of sequences better than 0.0: 0
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