BLASTX 7.6.2
Query= RU03851 /QuerySize=1014
(1013 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA bin... 180 1e-045
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 114 1e-025
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 114 1e-025
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 112 4e-025
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 112 4e-025
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 112 4e-025
TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-bindin... 101 8e-022
TAIR9_protein||AT4G39260.4 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 99 5e-021
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 89 3e-018
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 89 5e-018
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 89 5e-018
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 89 5e-018
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 89 5e-018
TAIR9_protein||AT1G60650.1 | Symbols: | glycine-rich RNA-bindin... 87 1e-017
TAIR9_protein||AT1G60650.2 | Symbols: | glycine-rich RNA-bindin... 87 1e-017
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 82 4e-016
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 82 4e-016
TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, pu... 81 8e-016
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 80 2e-015
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 79 4e-015
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 79 5e-015
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 79 5e-015
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 78 7e-015
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 77 1e-014
TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, pu... 75 5e-014
TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (... 75 6e-014
TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (... 75 6e-014
TAIR9_protein||AT2G37510.1 | Symbols: | RNA-binding protein, pu... 72 4e-013
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 72 5e-013
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 71 9e-013
>TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA binding /
nucleotide binding | chr3:9671953-9673055 FORWARD
Length = 246
Score = 180 bits (456), Expect = 1e-045
Identities = 89/140 (63%), Positives = 100/140 (71%), Gaps = 5/140 (3%)
Frame = +3
Query: 84 MSEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKA 263
MSE+PEYRCFIGGLAW+TSDR L++AF+KYG+LVEAKVV+DKFSGRSRGFGF+TFD+KKA
Sbjct: 1 MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60
Query: 264 MEEAIEEMNGIDLYGRTITVDKAQPHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 443
M+EAI MNG+DL GRTITVDKAQPHQ
Sbjct: 61 MDEAIAAMNGMDLDGRTITVDKAQPHQ-----GGAGRDNDGDRGRDRGYDRDRSRPSGGR 115
Query: 444 XXXDCFKCGKPGHFARECPS 503
DCFKCGKPGHFARECPS
Sbjct: 116 GGGDCFKCGKPGHFARECPS 135
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 114 bits (284), Expect = 1e-025
Identities = 51/83 (61%), Positives = 72/83 (86%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
S + EYRCF+GGLAW+T DR+L+ AF +YG+++++K++ D+ +GRSRGFGFVTF D+KAM
Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
Query: 267 EEAIEEMNGIDLYGRTITVDKAQ 335
++AIE MNG DL GR+ITV++AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 114 bits (284), Expect = 1e-025
Identities = 51/83 (61%), Positives = 72/83 (86%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
S + EYRCF+GGLAW+T DR+L+ AF +YG+++++K++ D+ +GRSRGFGFVTF D+KAM
Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
Query: 267 EEAIEEMNGIDLYGRTITVDKAQ 335
++AIE MNG DL GR+ITV++AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 112 bits (279), Expect = 4e-025
Identities = 49/81 (60%), Positives = 68/81 (83%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E EYRCF+GGLAW+T+D L+ F ++G+++++K++ D+ SGRSRGFGFVTF D+KAM +
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AIEEMNG +L GR ITV++AQ
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 112 bits (279), Expect = 4e-025
Identities = 49/81 (60%), Positives = 68/81 (83%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E EYRCF+GGLAW+T+D L+ F ++G+++++K++ D+ SGRSRGFGFVTF D+KAM +
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AIEEMNG +L GR ITV++AQ
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 112 bits (279), Expect = 4e-025
Identities = 49/81 (60%), Positives = 68/81 (83%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E EYRCF+GGLAW+T+D L+ F ++G+++++K++ D+ SGRSRGFGFVTF D+KAM +
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AIEEMNG +L GR ITV++AQ
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
>TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-binding protein |
chr5:1192461-1195413 FORWARD
Length = 311
Score = 101 bits (251), Expect = 8e-022
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Frame = +3
Query: 84 MSEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKA 263
M+ + R F+GGL+ +DR L+ AF ++G++++ ++++++ +GRSRGFGF+TF D++A
Sbjct: 1 MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60
Query: 264 MEEAIEEMNGIDLYGRTITVDKAQP---HQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 434
M+E+I EM+G D R I+V++A+P
Sbjct: 61 MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120
Query: 435 XXXXXXDCFKCGKPGHFARECPS 503
+CFKCG+ GH+AR+CPS
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPS 143
>TAIR9_protein||AT4G39260.4 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 106
Score = 99 bits (244), Expect = 5e-021
Identities = 41/67 (61%), Positives = 57/67 (85%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E EYRCF+GGLAW+T+D L+ F ++G+++++K++ D+ SGRSRGFGFVTF D+KAM +
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 273 AIEEMNG 293
AIEEMNG
Sbjct: 63 AIEEMNG 69
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 89 bits (220), Expect = 3e-018
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Frame = +3
Query: 39 QVLRSSPKSLFAVYKMSEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSG 218
QV SSP A+ MS + FIGG+A+S + SL+EAF KYG +V+ +V++D+ +G
Sbjct: 22 QVSLSSPSLFQAIRCMSSS---KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETG 78
Query: 219 RSRGFGFVTFDDKKAMEEAIEEMNGIDLYGRTITVDKA 332
RSRGFGFVTF +A AI+ ++G DL+GR + V+ A
Sbjct: 79 RSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYA 116
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 89 bits (218), Expect = 5e-018
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGGL+W T D SL++AF +G++V+AKV+VD+ +GRSRGFGFV F+D+ A AI E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 285 MNGIDLYGRTITVDKA 332
M+G +L GR I V+ A
Sbjct: 96 MDGKELNGRHIRVNPA 111
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 89 bits (218), Expect = 5e-018
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGGL+W T D SL++AF +G++V+AKV+VD+ +GRSRGFGFV F+D+ A AI E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 285 MNGIDLYGRTITVDKA 332
M+G +L GR I V+ A
Sbjct: 96 MDGKELNGRHIRVNPA 111
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 89 bits (218), Expect = 5e-018
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGGL+W T D SL++AF +G++V+AKV+VD+ +GRSRGFGFV F+D+ A AI E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 285 MNGIDLYGRTITVDKA 332
M+G +L GR I V+ A
Sbjct: 96 MDGKELNGRHIRVNPA 111
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 89 bits (218), Expect = 5e-018
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGGL+W T D SL++AF +G++V+AKV+VD+ +GRSRGFGFV F+D+ A AI E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 285 MNGIDLYGRTITVDKA 332
M+G +L GR I V+ A
Sbjct: 96 MDGKELNGRHIRVNPA 111
>TAIR9_protein||AT1G60650.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr1:22340089-22342148 FORWARD
Length = 293
Score = 87 bits (215), Expect = 1e-017
Identities = 35/80 (43%), Positives = 59/80 (73%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
E R F+GGL+W ++R L+ FD+YG + E +++V + +GR RGFGF+TF D++ ++AI
Sbjct: 11 ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70
Query: 279 EEMNGIDLYGRTITVDKAQP 338
+ M+G +L + I+V+KA+P
Sbjct: 71 KHMHGRELGNKVISVNKAEP 90
>TAIR9_protein||AT1G60650.2 | Symbols: | glycine-rich RNA-binding protein,
putative | chr1:22340089-22342148 FORWARD
Length = 293
Score = 87 bits (215), Expect = 1e-017
Identities = 35/80 (43%), Positives = 59/80 (73%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
E R F+GGL+W ++R L+ FD+YG + E +++V + +GR RGFGF+TF D++ ++AI
Sbjct: 11 ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70
Query: 279 EEMNGIDLYGRTITVDKAQP 338
+ M+G +L + I+V+KA+P
Sbjct: 71 KHMHGRELGNKVISVNKAEP 90
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 82 bits (202), Expect = 4e-016
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ F+GGL+W T D SLK+AF +G + EA V+ D+ +GRSRGFGFV+F + + AI+E
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 285 MNGIDLYGRTITVDKA 332
M+G +L GR I V+ A
Sbjct: 96 MDGKELNGRQIRVNLA 111
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 82 bits (202), Expect = 4e-016
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ F+GGL+W T D SLK+AF +G + EA V+ D+ +GRSRGFGFV+F + + AI+E
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 285 MNGIDLYGRTITVDKA 332
M+G +L GR I V+ A
Sbjct: 96 MDGKELNGRQIRVNLA 111
>TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, putative |
chr5:1878497-1879515 FORWARD
Length = 147
Score = 81 bits (199), Expect = 8e-016
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGGL++ T+++ L EAF K G +VEA++V+D+ S RS+GFGFVTF ++A+ E
Sbjct: 35 KLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALME 94
Query: 285 MNGIDLYGRTITVDKAQPHQ 344
NG L GRTI VD A+ Q
Sbjct: 95 FNGQQLNGRTIFVDYAKAKQ 114
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 80 bits (195), Expect = 2e-015
Identities = 34/77 (44%), Positives = 54/77 (70%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
R ++G L+W D +L+ F + G +VEA+V+ D+ SGRS+GFGFVT+D + ++ AI+
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 285 MNGIDLYGRTITVDKAQ 335
++G DL GR I V +A+
Sbjct: 265 LDGADLDGRQIRVSEAE 281
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 79 bits (193), Expect = 4e-015
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
EP +R ++G L W + L++ F ++G +VEA+VV D+ +GRSRGFGFVT D + E
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AI ++G +L GR I V+ A+
Sbjct: 301 AISALDGQNLEGRAIRVNVAE 321
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 79 bits (192), Expect = 5e-015
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
R ++G L+W D +L+ F++ G +VEA+V+ D+ SGRS+GFGFVT + +++AI
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 285 MNGIDLYGRTITVDKAQ 335
+NG DL GR I V +A+
Sbjct: 318 LNGADLDGRQIRVSEAE 334
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 79 bits (192), Expect = 5e-015
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
R ++G L+W D +L+ F++ G +VEA+V+ D+ SGRS+GFGFVT + +++AI
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 285 MNGIDLYGRTITVDKAQ 335
+NG DL GR I V +A+
Sbjct: 318 LNGADLDGRQIRVSEAE 334
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 78 bits (191), Expect = 7e-015
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E E++ F+G L+W+ + SL AF + G++V A+VV D +GRSRG+GFV + K ME
Sbjct: 174 ETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMET 233
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
A+E ++G +L GR I V+ AQ
Sbjct: 234 ALESLDGFELEGRAIRVNLAQ 254
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 77 bits (189), Expect = 1e-014
Identities = 36/76 (47%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ F+GG+++ST + L+EAF KYG +V+AK++VD+ +GRSRGF FVTF + A+ +
Sbjct: 35 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAM-Q 93
Query: 285 MNGIDLYGRTITVDKA 332
++G DL+GR I V+ A
Sbjct: 94 LDGQDLHGRRIRVNYA 109
>TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, putative |
chr3:2555034-2555829 REVERSE
Length = 144
Score = 75 bits (184), Expect = 5e-014
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
S P + FIGGL+WS ++SLK+AF +G + E ++ DK SGRSRGFGFV F ++
Sbjct: 36 SASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDA 95
Query: 267 EEAIEEMNGIDLYGRTITVDKA 332
A + M+G L GR + + A
Sbjct: 96 LSAKDAMDGKGLLGRPLRISFA 117
>TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445552-13447592 FORWARD
Length = 456
Score = 75 bits (183), Expect = 6e-014
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGG++W T + L+E F KYG+LVEA ++ D+ +GR+RGFGF+ F D E I +
Sbjct: 16 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 75
Query: 285 MNGIDLYGRTITVDKAQP 338
+ ID GRT+ KA P
Sbjct: 76 KHIID--GRTVEAKKAVP 91
>TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445265-13447592 FORWARD
Length = 453
Score = 75 bits (183), Expect = 6e-014
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGG++W T + L+E F KYG+LVEA ++ D+ +GR+RGFGF+ F D E I +
Sbjct: 13 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 72
Query: 285 MNGIDLYGRTITVDKAQP 338
+ ID GRT+ KA P
Sbjct: 73 KHIID--GRTVEAKKAVP 88
>TAIR9_protein||AT2G37510.1 | Symbols: | RNA-binding protein, putative |
chr2:15743112-15744504 REVERSE
Length = 143
Score = 72 bits (176), Expect = 4e-013
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +3
Query: 24 LLSLTQVLRSSPKSLFAVYKMSEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVV 203
L++ + L SSP V + S R F+ GL+ T++ L++AF +G LV+A+V+
Sbjct: 10 LVAGSSSLLSSPS--LCVRRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVIT 67
Query: 204 DKFSGRSRGFGFVTFDDKKAMEEAIEEMNGIDLYGRTITVDKAQPHQ 344
D+ SGRS+GFGFVT+ + E+A EMN L G I VD A+P +
Sbjct: 68 DRDSGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVDPARPRE 114
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 72 bits (175), Expect = 5e-013
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGG++W T++ LKE F +G ++EA ++ D+ +GR+RGFGFV F D E I E
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 285 MNGIDLYGRTITVDKAQP 338
+ ID GR + KA P
Sbjct: 67 KHNID--GRLVEAKKAVP 82
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 71 bits (173), Expect = 9e-013
Identities = 33/73 (45%), Positives = 51/73 (69%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
R ++G L+ +T+D L+EAF YGN+V+A V+ D+++ RSRGFGFVT+ E A+
Sbjct: 4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63
Query: 285 MNGIDLYGRTITV 323
M+G +L GR ++V
Sbjct: 64 MDGKELNGRRVSV 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,039,283,375
Number of Sequences: 33410
Number of Extensions: 1039283375
Number of Successful Extensions: 51547929
Number of sequences better than 0.0: 0
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