BLASTX 7.6.2
Query= RU04020 /QuerySize=294
(293 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G36240.1 | Symbols: | 60S ribosomal protein L... 138 6e-034
TAIR9_protein||AT3G18740.1 | Symbols: | 60S ribosomal protein L... 138 1e-033
TAIR9_protein||AT1G77940.1 | Symbols: | 60S ribosomal protein L... 137 1e-033
>TAIR9_protein||AT1G36240.1 | Symbols: | 60S ribosomal protein L30 (RPL30A) |
chr1:13614890-13616233 FORWARD
Length = 113
Score = 138 bits (347), Expect = 6e-034
Identities = 67/83 (80%), Positives = 73/83 (87%)
Frame = +3
Query: 45 MVAVXXXXXXHESINNRLALVMKSGKYTLGYKTVIDSLRSSKGKLIIISNNCPPLRKSEI 224
MVA HE IN+RLALVMKSGKYTLGYK+V+ SLRSSKGKLI+IS+NCPPLR+SEI
Sbjct: 1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
Query: 225 EYYAMLAKVGVHHYNGNNVDLGT 293
EYYAMLAKVGVHHYN NNVDLGT
Sbjct: 61 EYYAMLAKVGVHHYNRNNVDLGT 83
>TAIR9_protein||AT3G18740.1 | Symbols: | 60S ribosomal protein L30 (RPL30C) |
chr3:6453437-6453870 FORWARD
Length = 113
Score = 138 bits (345), Expect = 1e-033
Identities = 67/83 (80%), Positives = 73/83 (87%)
Frame = +3
Query: 45 MVAVXXXXXXHESINNRLALVMKSGKYTLGYKTVIDSLRSSKGKLIIISNNCPPLRKSEI 224
MVA HE IN+RLALVMKSGKYTLGYK+V+ SLRSSKGKLI+IS+NCPPLR+SEI
Sbjct: 1 MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
Query: 225 EYYAMLAKVGVHHYNGNNVDLGT 293
EYYAMLAKVGVH YNGNNVDLGT
Sbjct: 61 EYYAMLAKVGVHRYNGNNVDLGT 83
>TAIR9_protein||AT1G77940.1 | Symbols: | 60S ribosomal protein L30 (RPL30B) |
chr1:29304116-29305288 REVERSE
Length = 113
Score = 137 bits (344), Expect = 1e-033
Identities = 66/83 (79%), Positives = 71/83 (85%)
Frame = +3
Query: 45 MVAVXXXXXXHESINNRLALVMKSGKYTLGYKTVIDSLRSSKGKLIIISNNCPPLRKSEI 224
MV HE IN+RLALVMKSGKYTLGYK+V+ SLR SKGKLI+IS NCPPLR+SEI
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
Query: 225 EYYAMLAKVGVHHYNGNNVDLGT 293
EYYAMLAKVGVHHYNGNNVDLGT
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,097,680,256
Number of Sequences: 33410
Number of Extensions: 1097680256
Number of Successful Extensions: 56500652
Number of sequences better than 0.0: 0
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