BLASTX 7.6.2
Query= RU04137 /QuerySize=799
(798 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G70660.1 | Symbols: MMZ2, UEV1B | MMZ2 (MMS ZW... 255 4e-068
TAIR9_protein||AT1G23260.1 | Symbols: MMZ1, UEV1A | MMZ1 (MMS ZW... 253 9e-068
TAIR9_protein||AT3G52560.1 | Symbols: UEV1D-4, MMZ4, UEV1D | UEV... 230 1e-060
TAIR9_protein||AT3G52560.2 | Symbols: UEV1D-4 | UEV1D-4 (UBIQUIT... 225 3e-059
TAIR9_protein||AT2G36060.1 | Symbols: MMZ3, UEV1C | ubiquitin-co... 225 4e-059
TAIR9_protein||AT2G36060.2 | Symbols: MMZ3, UEV1C | ubiquitin-co... 220 1e-057
TAIR9_protein||AT2G36060.3 | Symbols: MMZ3, UEV1C | ubiquitin-co... 218 3e-057
TAIR9_protein||AT3G52560.3 | Symbols: UEV1D-4 | UEV1D-4 (UBIQUIT... 177 8e-045
TAIR9_protein||AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-c... 48 7e-006
>TAIR9_protein||AT1G70660.1 | Symbols: MMZ2, UEV1B | MMZ2 (MMS ZWEI HOMOLOGE 2);
protein binding / ubiquitin-protein ligase | chr1:26640755-26641949
FORWARD
Length = 160
Score = 255 bits (649), Expect = 4e-068
Identities = 119/160 (74%), Positives = 135/160 (84%)
Frame = +1
Query: 91 MGSEPSTVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHE 270
MGSE VVVPRNFR RGEKGIGDGTVSYGMDDADDI MQSWTGTI+GP NT +E
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60
Query: 271 GRIYQLKLFCGKDYPDNPPAVRFQTRINMTCVNHETGVVEPSLFPMLANWQREHTMEDIL 450
G+I+QLKLFCGKDYP++PP VRFQ+RINM CVN E GVV+PS FPML+NW+RE TMED+L
Sbjct: 61 GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120
Query: 451 TQLKKDMMSPQNRKLAQPPEGHEEGRVDQKGLVLKCVIL* 570
QLKK+MMS QNRKLAQP EG+EEGR D KGLV+KC ++*
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM* 160
>TAIR9_protein||AT1G23260.1 | Symbols: MMZ1, UEV1A | MMZ1 (MMS ZWEI HOMOLOGUE
1); protein binding / ubiquitin-protein ligase | chr1:8257209-8258573
REVERSE
Length = 159
Score = 253 bits (646), Expect = 9e-068
Identities = 118/158 (74%), Positives = 134/158 (84%)
Frame = +1
Query: 91 MGSEPSTVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHE 270
M SE + VVVPRNFR RGEKGIGDGTVSYGMDDADDI+MQSWTGTI+GPPNT +E
Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60
Query: 271 GRIYQLKLFCGKDYPDNPPAVRFQTRINMTCVNHETGVVEPSLFPMLANWQREHTMEDIL 450
G+I+QLKLFCGK+YP++PP VRFQTRINM CVN ETGVVEPSLFPML NW+RE+TMEDIL
Sbjct: 61 GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120
Query: 451 TQLKKDMMSPQNRKLAQPPEGHEEGRVDQKGLVLKCVI 564
+LKK+MM+ NRKLAQPPEG+EE R D KG CV+
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKGPAKCCVM 158
>TAIR9_protein||AT3G52560.1 | Symbols: UEV1D-4, MMZ4, UEV1D | UEV1D-4 (UBIQUITIN
E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase |
chr3:19494678-19495954 REVERSE
Length = 147
Score = 230 bits (584), Expect = 1e-060
Identities = 106/143 (74%), Positives = 119/143 (83%)
Frame = +1
Query: 85 INMGSEPSTVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTV 264
+ +GS S+VVVPRNFR RGEKGIGDGTVSYGMDD DDI+M+SWTGTIIGP NTV
Sbjct: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
Query: 265 HEGRIYQLKLFCGKDYPDNPPAVRFQTRINMTCVNHETGVVEPSLFPMLANWQREHTMED 444
HEGRIYQLKLFC KDYP+ PP VRF +R+NM CVNHETGVV+P F +LANWQRE+TMED
Sbjct: 61 HEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMED 120
Query: 445 ILTQLKKDMMSPQNRKLAQPPEG 513
IL QLKK+M + NRKL QPPEG
Sbjct: 121 ILVQLKKEMSTSHNRKLVQPPEG 143
>TAIR9_protein||AT3G52560.2 | Symbols: UEV1D-4 | UEV1D-4 (UBIQUITIN E2 VARIANT
1D-4); protein binding / ubiquitin-protein ligase |
chr3:19494678-19495954 REVERSE
Length = 148
Score = 225 bits (572), Expect = 3e-059
Identities = 106/144 (73%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
Frame = +1
Query: 85 INMGSEPSTVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPN-T 261
+ +GS S+VVVPRNFR RGEKGIGDGTVSYGMDD DDI+M+SWTGTIIGP N T
Sbjct: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVT 60
Query: 262 VHEGRIYQLKLFCGKDYPDNPPAVRFQTRINMTCVNHETGVVEPSLFPMLANWQREHTME 441
VHEGRIYQLKLFC KDYP+ PP VRF +R+NM CVNHETGVV+P F +LANWQRE+TME
Sbjct: 61 VHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTME 120
Query: 442 DILTQLKKDMMSPQNRKLAQPPEG 513
DIL QLKK+M + NRKL QPPEG
Sbjct: 121 DILVQLKKEMSTSHNRKLVQPPEG 144
>TAIR9_protein||AT2G36060.1 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating
enzyme family protein | chr2:15143012-15143998 REVERSE
Length = 146
Score = 225 bits (571), Expect = 4e-059
Identities = 104/136 (76%), Positives = 116/136 (85%)
Frame = +1
Query: 106 STVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHEGRIYQ 285
S+VVVPRNFR RGEKGIGDGTVSYGMDD DDI+M+SWTGTIIGP NTVHEGRIYQ
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 66
Query: 286 LKLFCGKDYPDNPPAVRFQTRINMTCVNHETGVVEPSLFPMLANWQREHTMEDILTQLKK 465
LKLFC KDYP+ PP VRF +RINMTCVNH+TGVV+ F +LANWQR++TMEDILTQLKK
Sbjct: 67 LKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKK 126
Query: 466 DMMSPQNRKLAQPPEG 513
+M + NRKL QPPEG
Sbjct: 127 EMAASHNRKLVQPPEG 142
>TAIR9_protein||AT2G36060.2 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating
enzyme family protein | chr2:15143012-15143998 REVERSE
Length = 147
Score = 220 bits (559), Expect = 1e-057
Identities = 104/137 (75%), Positives = 116/137 (84%), Gaps = 1/137 (0%)
Frame = +1
Query: 106 STVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPN-TVHEGRIY 282
S+VVVPRNFR RGEKGIGDGTVSYGMDD DDI+M+SWTGTIIGP N TVHEGRIY
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIY 66
Query: 283 QLKLFCGKDYPDNPPAVRFQTRINMTCVNHETGVVEPSLFPMLANWQREHTMEDILTQLK 462
QLKLFC KDYP+ PP VRF +RINMTCVNH+TGVV+ F +LANWQR++TMEDILTQLK
Sbjct: 67 QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 126
Query: 463 KDMMSPQNRKLAQPPEG 513
K+M + NRKL QPPEG
Sbjct: 127 KEMAASHNRKLVQPPEG 143
>TAIR9_protein||AT2G36060.3 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating
enzyme family protein | chr2:15143012-15143998 REVERSE
Length = 145
Score = 218 bits (555), Expect = 3e-057
Identities = 103/136 (75%), Positives = 115/136 (84%), Gaps = 1/136 (0%)
Frame = +1
Query: 106 STVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHEGRIYQ 285
S+VVVPRNFR RGEKGIGDGTVSYGMDD DDI+M+SWTGTIIGP NTVHEGRIYQ
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 66
Query: 286 LKLFCGKDYPDNPPAVRFQTRINMTCVNHETGVVEPSLFPMLANWQREHTMEDILTQLKK 465
LKLFC KDYP+ PP VRF +RINMTCVNH+TG V+ F +LANWQR++TMEDILTQLKK
Sbjct: 67 LKLFCDKDYPEKPPTVRFHSRINMTCVNHDTG-VDSKKFGVLANWQRQYTMEDILTQLKK 125
Query: 466 DMMSPQNRKLAQPPEG 513
+M + NRKL QPPEG
Sbjct: 126 EMAASHNRKLVQPPEG 141
>TAIR9_protein||AT3G52560.3 | Symbols: UEV1D-4 | UEV1D-4 (UBIQUITIN E2 VARIANT
1D-4); protein binding / ubiquitin-protein ligase |
chr3:19494678-19495331 REVERSE
Length = 111
Score = 177 bits (448), Expect = 8e-045
Identities = 81/107 (75%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
Frame = +1
Query: 196 MDDADDIFMQSWTGTIIGPPN-TVHEGRIYQLKLFCGKDYPDNPPAVRFQTRINMTCVNH 372
MDD DDI+M+SWTGTIIGP N TVHEGRIYQLKLFC KDYP+ PP VRF +R+NM CVNH
Sbjct: 1 MDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNH 60
Query: 373 ETGVVEPSLFPMLANWQREHTMEDILTQLKKDMMSPQNRKLAQPPEG 513
ETGVV+P F +LANWQRE+TMEDIL QLKK+M + NRKL QPPEG
Sbjct: 61 ETGVVDPKKFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEG 107
>TAIR9_protein||AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating
enzyme 13); ubiquitin-protein ligase | chr3:17096120-17097315 REVERSE
Length = 167
Score = 48 bits (112), Expect = 7e-006
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = +1
Query: 187 SYGMDDADDIFMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQTRI 351
S G+ D +IF W+ TIIGPP+T++EG + + ++YP++PP VRF + I
Sbjct: 25 SAGLVDEKNIF--EWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDI 77
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,097,680,256
Number of Sequences: 33410
Number of Extensions: 1097680256
Number of Successful Extensions: 56500652
Number of sequences better than 0.0: 0
|