BLASTX 7.6.2
Query= RU04167 /QuerySize=597
(596 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G60460.1 | Symbols: | sec61beta family protei... 86 1e-017
TAIR9_protein||AT3G60540.1 | Symbols: | sec61beta family protei... 64 5e-011
TAIR9_protein||AT3G60540.2 | Symbols: | sec61beta family protei... 64 5e-011
TAIR9_protein||AT2G45070.1 | Symbols: SEC61 BETA | SEC61 BETA; p... 63 1e-010
TAIR9_protein||AT2G45070.2 | Symbols: SEC61 BETA | SEC61 BETA; p... 63 1e-010
TAIR9_protein||AT2G45070.3 | Symbols: SEC61 BETA | SEC61 BETA; p... 63 1e-010
TAIR9_protein||AT2G45070.4 | Symbols: SEC61 BETA | SEC61 BETA; p... 63 1e-010
>TAIR9_protein||AT5G60460.1 | Symbols: | sec61beta family protein |
chr5:24317590-24317919 REVERSE
Length = 110
Score = 86 bits (211), Expect = 1e-017
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +1
Query: 232 FYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYLHRSTGGA* 369
FYTDDAPGLKISPTVVL+MSLCFIGFVTALHVFGKLYLH+S A*
Sbjct: 65 FYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKLYLHKSGSQA* 110
>TAIR9_protein||AT3G60540.1 | Symbols: | sec61beta family protein |
chr3:22375132-22375377 REVERSE
Length = 82
Score = 64 bits (155), Expect = 5e-011
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +1
Query: 232 FYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYLHRS 354
FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY +S
Sbjct: 40 FYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVKS 80
>TAIR9_protein||AT3G60540.2 | Symbols: | sec61beta family protein |
chr3:22375132-22375377 REVERSE
Length = 82
Score = 64 bits (155), Expect = 5e-011
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +1
Query: 232 FYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYLHRS 354
FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY +S
Sbjct: 40 FYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVKS 80
>TAIR9_protein||AT2G45070.1 | Symbols: SEC61 BETA | SEC61 BETA; protein
transporter | chr2:18587208-18587456 REVERSE
Length = 83
Score = 63 bits (152), Expect = 1e-010
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1
Query: 232 FYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLY 342
FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 43 FYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLY 79
>TAIR9_protein||AT2G45070.2 | Symbols: SEC61 BETA | SEC61 BETA; protein
transporter | chr2:18587208-18587456 REVERSE
Length = 83
Score = 63 bits (152), Expect = 1e-010
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1
Query: 232 FYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLY 342
FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 43 FYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLY 79
>TAIR9_protein||AT2G45070.3 | Symbols: SEC61 BETA | SEC61 BETA; protein
transporter | chr2:18587208-18587456 REVERSE
Length = 83
Score = 63 bits (152), Expect = 1e-010
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1
Query: 232 FYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLY 342
FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 43 FYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLY 79
>TAIR9_protein||AT2G45070.4 | Symbols: SEC61 BETA | SEC61 BETA; protein
transporter | chr2:18587208-18587456 REVERSE
Length = 83
Score = 63 bits (152), Expect = 1e-010
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1
Query: 232 FYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLY 342
FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 43 FYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLY 79
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,097,680,256
Number of Sequences: 33410
Number of Extensions: 1097680256
Number of Successful Extensions: 56500652
Number of sequences better than 0.0: 0
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