BLASTX 7.6.2
Query= RU04180 /QuerySize=745
(744 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G49940.1 | Symbols: LBD38 | LBD38 (LOB DOMAIN-... 166 2e-041
TAIR9_protein||AT4G37540.1 | Symbols: LBD39 | LBD39 (LOB DOMAIN-... 165 4e-041
TAIR9_protein||AT5G67420.1 | Symbols: LBD37 | LBD37 (LOB DOMAIN-... 165 4e-041
TAIR9_protein||AT3G02550.1 | Symbols: LBD41 | LBD41 (LOB DOMAIN-... 131 6e-031
TAIR9_protein||AT1G67100.1 | Symbols: LBD40 | LBD40 (LOB DOMAIN-... 131 8e-031
TAIR9_protein||AT1G68510.1 | Symbols: LBD42 | LBD42 (LOB DOMAIN-... 126 2e-029
>TAIR9_protein||AT3G49940.1 | Symbols: LBD38 | LBD38 (LOB DOMAIN-CONTAINING
PROTEIN 38) | chr3:18514465-18515302 FORWARD
Length = 248
Score = 166 bits (419), Expect = 2e-041
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE+CILRPC+QWIE+PEAQGHATVFVAKFFGRAGLMSFISAVPE Q
Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P LFQSLL+EACGRTVNPVNGAVG
Sbjct: 61 PALFQSLLYEACGRTVNPVNGAVG 84
Score = 88 bits (217), Expect = 4e-018
Identities = 59/139 (42%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Frame = -2
Query: 410 GLLWTGNWQVCQAAVETVLRGGTLRPIPELVSGSGSGLTPDEASEADGTACTDMWRLRDP 231
GLLWTGNW VCQAAVETVLRGG+L+PIPEL++G G P S+ CT+M LR
Sbjct: 84 GLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGFPSPTSDEASEICTEMLNLRKA 143
Query: 230 THXXXXXXXXXXXXXKAASCSPTT----KRKRPDDESLKVLQHADLDLRLTPTLLAFRPK 63
+ S S +T KRKR E ++LDL L P + +
Sbjct: 144 DDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSSEQ---QPSSELDLSLIP-IYPIKTL 199
Query: 62 PKPETRRPGSPSMNSEESV 6
P E +PSM SEESV
Sbjct: 200 PFKE----DTPSMYSEESV 214
>TAIR9_protein||AT4G37540.1 | Symbols: LBD39 | LBD39 (LOB DOMAIN-CONTAINING
PROTEIN 39) | chr4:17639649-17640509 REVERSE
Length = 241
Score = 165 bits (416), Expect = 4e-041
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE+CILRPCLQWIE+ E+QGHATVFVAKFFGRAGLMSFIS+VPE QR
Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P LFQSLLFEACGRTVNPVNGAVG
Sbjct: 61 PALFQSLLFEACGRTVNPVNGAVG 84
Score = 64 bits (154), Expect = 9e-011
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 410 GLLWTGNWQVCQAAVETVLRGGTLRPIPELVSGSGSGLTPDEASE 276
G+LWT NW VCQAAVETVLRGGTLRPI +L+ ++ DE+SE
Sbjct: 84 GMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLMISCDESSE 128
>TAIR9_protein||AT5G67420.1 | Symbols: LBD37 | LBD37 (LOB DOMAIN-CONTAINING
PROTEIN 37) | chr5:26904576-26905415 REVERSE
Length = 251
Score = 165 bits (416), Expect = 4e-041
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE+CILRPC+QWIET +AQGHATVFVAKFFGRAGLMSFISAVP+ QR
Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P LFQSLL+EACGRTVNPVNGA+G
Sbjct: 61 PALFQSLLYEACGRTVNPVNGAIG 84
Score = 74 bits (180), Expect = 8e-014
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -2
Query: 410 GLLWTGNWQVCQAAVETVLRGGTLRPIPELVS-GSGSGLTPDEASEADGTACTDMWRLR 237
G+LWTGNW +CQAAVETVLRGG+LRPIPEL++ G G P SE CT+M L+
Sbjct: 84 GMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGFAGFPSPTSEEASEICTEMLNLQ 142
>TAIR9_protein||AT3G02550.1 | Symbols: LBD41 | LBD41 (LOB DOMAIN-CONTAINING
PROTEIN 41) | chr3:536747-537650 REVERSE
Length = 264
Score = 131 bits (328), Expect = 6e-031
Identities = 59/84 (70%), Positives = 71/84 (84%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE C +RPCL WI++PEAQ +ATVF+AKF+GRAGLM+ I+A P R
Sbjct: 3 MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLR 62
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P +F+SLL EACGR VNP+ G+VG
Sbjct: 63 PGIFRSLLHEACGRIVNPIYGSVG 86
>TAIR9_protein||AT1G67100.1 | Symbols: LBD40 | LBD40 (LOB DOMAIN-CONTAINING
PROTEIN 40) | chr1:25053801-25054659 FORWARD
Length = 234
Score = 131 bits (327), Expect = 8e-031
Identities = 56/84 (66%), Positives = 73/84 (86%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE+C +RPCLQWI++ E+Q +ATVF+AKF+GRAGLM+ ++ P+ R
Sbjct: 3 MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P +F+SLL+EACGR VNP+ G+VG
Sbjct: 63 PAIFRSLLYEACGRIVNPIYGSVG 86
>TAIR9_protein||AT1G68510.1 | Symbols: LBD42 | LBD42 (LOB DOMAIN-CONTAINING
PROTEIN 42) | chr1:25707033-25708004 FORWARD
Length = 234
Score = 126 bits (315), Expect = 2e-029
Identities = 53/89 (59%), Positives = 74/89 (83%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
+SCNGCRVLRKGC++ C +RPCLQWI++ ++Q +AT+F+AKF+GRAGL++ I + P+ R
Sbjct: 3 ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62
Query: 478 PVLFQSLLFEACGRTVNPVNGAVGCSGPG 392
P +F+SLL+EACGR VNPV+G+VG G
Sbjct: 63 PAIFRSLLYEACGRIVNPVDGSVGLMWSG 91
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,097,680,256
Number of Sequences: 33410
Number of Extensions: 1097680256
Number of Successful Extensions: 56500652
Number of sequences better than 0.0: 0
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