BLASTX 7.6.2
Query= RU04255 /QuerySize=477
(476 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQU... 139 1e-033
TAIR9_protein||AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQU... 139 1e-033
TAIR9_protein||AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2 (UBI... 139 1e-033
TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-con... 122 2e-028
TAIR9_protein||AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1... 52 1e-007
>TAIR9_protein||AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase | chr1:4927294-4928136 REVERSE
Length = 153
Score = 139 bits (349), Expect = 1e-033
Identities = 64/69 (92%), Positives = 66/69 (95%)
Frame = -1
Query: 272 MSTPARKRLIRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 93
MSTPARKRL+RDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 92 EDYPK*RPT 66
EDYP PT
Sbjct: 61 EDYPNKPPT 69
>TAIR9_protein||AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase | chr1:4927294-4928136 REVERSE
Length = 153
Score = 139 bits (349), Expect = 1e-033
Identities = 64/69 (92%), Positives = 66/69 (95%)
Frame = -1
Query: 272 MSTPARKRLIRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 93
MSTPARKRL+RDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 92 EDYPK*RPT 66
EDYP PT
Sbjct: 61 EDYPNKPPT 69
>TAIR9_protein||AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2
(UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase |
chr2:774271-775149 FORWARD
Length = 153
Score = 139 bits (349), Expect = 1e-033
Identities = 64/69 (92%), Positives = 66/69 (95%)
Frame = -1
Query: 272 MSTPARKRLIRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 93
MSTPARKRL+RDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 92 EDYPK*RPT 66
EDYP PT
Sbjct: 61 EDYPNKPPT 69
>TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465 FORWARD
Length = 151
Score = 122 bits (304), Expect = 2e-028
Identities = 54/68 (79%), Positives = 61/68 (89%)
Frame = -1
Query: 272 MSTPARKRLIRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 93
M+TPA+KRL+ DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL F+
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 92 EDYPK*RP 69
EDYP P
Sbjct: 61 EDYPNKPP 68
>TAIR9_protein||AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 |
SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase | chr3:21428831-21430110
REVERSE
Length = 161
Score = 52 bits (124), Expect = 1e-007
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = -1
Query: 260 ARKRLIRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLTLQF 96
AR RL + K +++ P G P+ N+M+W+ I G T W+GG F LT+ F
Sbjct: 6 ARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHF 65
Query: 95 SEDYPK*RP 69
SEDYP P
Sbjct: 66 SEDYPSKPP 74
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,097,680,256
Number of Sequences: 33410
Number of Extensions: 1097680256
Number of Successful Extensions: 56500652
Number of sequences better than 0.0: 0
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