BLASTX 7.6.2
Query= RU04308 /QuerySize=1023
(1022 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type... 110 2e-024
TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type... 97 1e-020
TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type... 97 1e-020
TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 75 8e-014
TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 75 8e-014
TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 75 8e-014
TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 75 8e-014
TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type... 72 4e-013
TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type... 71 1e-012
TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type... 69 4e-012
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 66 3e-011
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 66 4e-011
TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type... 63 2e-010
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 61 9e-010
TAIR9_protein||AT1G05290.1 | Symbols: | transcription factor | ... 60 3e-009
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 59 3e-009
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 55 5e-008
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 55 6e-008
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 54 1e-007
TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-... 54 1e-007
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 54 2e-007
TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type... 54 2e-007
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 53 2e-007
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 52 7e-007
TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-r... 51 9e-007
TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABI... 49 4e-006
TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 48 8e-006
TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulat... 48 8e-006
>TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:9775768-9777657 REVERSE
Length = 434
Score = 110 bits (274), Expect = 2e-024
Identities = 67/127 (52%), Positives = 83/127 (65%), Gaps = 12/127 (9%)
Frame = -2
Query: 520 GQDDIKFNINSNNPAVSQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFL--IRSD 347
G +IK + + + P SESNN I FG +KG+ ++++ F I
Sbjct: 312 GVKEIKKDDYKRSTSGQVQPTKSESNNRPI-------TFGSEKGSNSSSDLHFTEHIAGT 364
Query: 346 SLRTT---GTKADMELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRF 176
S +TT TKAD+E LAQNRG+AM RYKEK+K RRYDK IRYESRKARADTR RV+GRF
Sbjct: 365 SCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRF 424
Query: 175 VKATEAP 155
VKA+EAP
Sbjct: 425 VKASEAP 431
>TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 403
Score = 97 bits (241), Expect = 1e-020
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Frame = -2
Query: 472 SQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFLIRSDSLRTTG-TKADMELLAQN 296
++G TS+SNNI S S+ D + TE + + + R T AD+E +AQN
Sbjct: 299 TKGQETSKSNNIPAAIHSHKSS--NDSCGLHCTEHIAITSNRATRLVAVTNADLEQMAQN 356
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATE 161
R NAM RYKEKKK RRYDK IRYE+RKARA+TR RVKGRFVKAT+
Sbjct: 357 RDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKATD 401
Score = 60 bits (144), Expect = 2e-009
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Frame = -2
Query: 850 DGVNVGSVAVSQPLLQQQAPFTSLLMMAEGIVDRDMLWDTNPHGHNTQGTQIWDFNLGKL 671
+G+N G ++SQP FTSLL M++ + M W+ H Q TQIWDFNLG+
Sbjct: 194 EGIN-GGGSISQP--SPTTSFTSLL-MSQSLCGNGMQWNATNHS-TGQNTQIWDFNLGQS 248
Query: 670 RDHEETVPLDVPYGSGGSGFMIKNFSELLKEASLTDTKMYGDMYQMNCPIGQDDIKFNIN 491
R+ +E P++ + GS F N + L + T+ + + YQ + K
Sbjct: 249 RNPDEPSPVE----TKGSTFTFNNVTHLKNDTRTTNMNAFKESYQQEDSVHSTSTKGQET 304
Query: 490 SNNPAVSQGPATSESNNISIG 428
S + + + +S+N S G
Sbjct: 305 SKSNNIPAAIHSHKSSNDSCG 325
>TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 402
Score = 97 bits (241), Expect = 1e-020
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Frame = -2
Query: 472 SQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFLIRSDSLRTTG-TKADMELLAQN 296
++G TS+SNNI S S+ D + TE + + + R T AD+E +AQN
Sbjct: 298 TKGQETSKSNNIPAAIHSHKSS--NDSCGLHCTEHIAITSNRATRLVAVTNADLEQMAQN 355
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATE 161
R NAM RYKEKKK RRYDK IRYE+RKARA+TR RVKGRFVKAT+
Sbjct: 356 RDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKATD 400
Score = 57 bits (135), Expect = 2e-008
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Frame = -2
Query: 850 DGVNVGSVAVSQPLLQQQAPFTSLLMMAEGIVDRDMLWDTNPHGHNTQGTQIWDFNLGKL 671
+G+N G ++SQP FTSLL M++ + M W+ H Q TQIWDFNLG+
Sbjct: 194 EGIN-GGGSISQP--SPTTSFTSLL-MSQSLCGNGMQWNATNHS-TGQNTQIWDFNLGQS 248
Query: 670 RDHEETVPLDVPYGSGGSGFMIKNFSELLKEASLTDTKMYGDMYQ 536
R+ +E P++ + GS F N + L + T+ + + YQ
Sbjct: 249 RNPDEPSPVE----TKGSTFTFNNVTHLKNDTRTTNMNAFKESYQ 289
>TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 75 bits (182), Expect = 8e-014
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -2
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPD 152
R NA++RYKEKKK R++DK +RY SRKARAD R+RVKGRFVKA EA D
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYD 362
>TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 75 bits (182), Expect = 8e-014
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -2
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPD 152
R NA++RYKEKKK R++DK +RY SRKARAD R+RVKGRFVKA EA D
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYD 362
>TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 75 bits (182), Expect = 8e-014
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -2
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPD 152
R NA++RYKEKKK R++DK +RY SRKARAD R+RVKGRFVKA EA D
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYD 362
>TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 75 bits (182), Expect = 8e-014
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -2
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPD 152
R NA++RYKEKKK R++DK +RY SRKARAD R+RVKGRFVKA EA D
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYD 362
>TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type) family
protein | chr5:19561719-19563113 REVERSE
Length = 374
Score = 72 bits (176), Expect = 4e-013
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -2
Query: 304 AQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPD 152
A R NA++RYKEKKK R++DK +RY SRK RAD R+RVKGRFVK+ EA D
Sbjct: 313 ATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYD 363
>TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609476 FORWARD
Length = 333
Score = 71 bits (172), Expect = 1e-012
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = -2
Query: 313 ELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATE 161
E+ + R +A+ RYKEKKK+RRY+KHIRYESRK RA++R R++GRF KA +
Sbjct: 281 EINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAAD 331
>TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type) family
protein | chr3:7706748-7708093 FORWARD
Length = 365
Score = 69 bits (167), Expect = 4e-012
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2
Query: 301 QNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPD 152
Q R A LRYKEKK R + K IRY SRKARADTRKRVKGRFVKA ++ D
Sbjct: 305 QARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDSYD 354
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 66 bits (160), Expect = 3e-011
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Frame = -2
Query: 445 NNISIGRPSSGSAFG--EDKGNIATTEGPFLIRSDSLRTTGTKADMELLAQNRGNAMLRY 272
N IS SS G D G++A P+ + S GT+ + L + R ++RY
Sbjct: 287 NCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGTQRAVPLTSAEREARVMRY 346
Query: 271 KEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATE 161
+EK+KNR+++K IRY SRKA A+ R R+KGRF K T+
Sbjct: 347 REKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 383
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 66 bits (159), Expect = 4e-011
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 6/130 (4%)
Frame = -2
Query: 526 PIGQDDIKFNINSNNPAVSQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFLIRSD 347
P+ +D F+I+ +S S+S + S+ S D GN + +
Sbjct: 214 PLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVSTSSIEYGVVPD-GNTNNS-----VNRS 267
Query: 346 SLRTTGTKADMELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKA 167
++ ++ T D + + +R +LRY+EK+KNR+++K IRY SRKA A++R R+KGRF K
Sbjct: 268 TITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKR 327
Query: 166 TEAPDG*IML 137
TE + I L
Sbjct: 328 TETENDDIFL 337
>TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:8709942-8711106 REVERSE
Length = 331
Score = 63 bits (152), Expect = 2e-010
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -2
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATE 161
R A RYK+KK R + K IRY SRKARADTRKRVKGRFVK+ E
Sbjct: 276 RDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVKSGE 320
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 61 bits (147), Expect = 9e-010
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = -2
Query: 349 DSLRTTGTKADMELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVK 170
D L T+ +L R +LRY+EKKK R++DK IRY SRKA A+ R R+KGRF K
Sbjct: 260 DQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
Query: 169 ATE 161
E
Sbjct: 320 RIE 322
>TAIR9_protein||AT1G05290.1 | Symbols: | transcription factor |
chr1:1539152-1540546 REVERSE
Length = 370
Score = 60 bits (143), Expect = 3e-009
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -2
Query: 301 QNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKA 167
++R A RY EKKK R++ K IRYESRK+ ADT+KR+KGRF KA
Sbjct: 305 KDREEAKKRYFEKKKKRKFGKQIRYESRKSTADTKKRMKGRFTKA 349
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 59 bits (142), Expect = 3e-009
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = -2
Query: 316 MELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEA 158
++L R +LRY+EK+KNR+++K IRY SRKA A+ R R+KGRF K T++
Sbjct: 222 VQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 55 bits (132), Expect = 5e-008
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Frame = -2
Query: 517 QDDIKFNINSNNPAVSQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFLIRSDSLR 338
Q + + +IN + + S S+ +++ G E + AT P ++ + +
Sbjct: 214 QQNFQLSINCGSWGALRSSNGSLSHMVNVSSMDLG-VVPESTTSDATVSNPRSPKAVTDQ 272
Query: 337 TTGTKADMELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEA 158
A M L ++R +LRY+EKKK R+++K IRY SRKA A+ R R+KGRF K +
Sbjct: 273 PPYPPAQM-LSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDV 331
Query: 157 PD 152
+
Sbjct: 332 DE 333
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 55 bits (131), Expect = 6e-008
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = -2
Query: 298 NRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEA 158
+R ++LRYKEK++NR + K IRY+ RK A+ R RVKGRFVK ++
Sbjct: 293 HREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKREDS 339
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 54 bits (129), Expect = 1e-007
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Frame = -2
Query: 517 QDDIKFNINSNNPAVSQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFLIRSDSLR 338
Q + +FNI + S ++N I +G E + T P + +
Sbjct: 229 QQNFQFNIKYGSSGTHYNDNGSINHNAYISSMETG-VVPESTACVTTASHPRTPKGTVEQ 287
Query: 337 TTGTKADM----ELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVK 170
+ M +L +R +LRY+EK+K R+++K IRY SRKA A+ R RV GRF K
Sbjct: 288 QPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAK 347
>TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 395
Score = 54 bits (128), Expect = 1e-007
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = -2
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEA 158
R ++LRYKEK++NR + K IRY+ RK AD R R+KGRFV+ A
Sbjct: 341 REASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRRPNA 386
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 54 bits (127), Expect = 2e-007
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = -2
Query: 277 RYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPDG* 146
RY++K+KNR ++K IRYE RK AD R R+KGRFV+ + A D *
Sbjct: 284 RYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLAIDS* 327
>TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175811 REVERSE
Length = 320
Score = 54 bits (127), Expect = 2e-007
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = -2
Query: 277 RYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPDG* 146
RY++K+KNR ++K IRYE RK AD R R+KGRFV+ + A D *
Sbjct: 277 RYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLAIDS* 320
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 53 bits (126), Expect = 2e-007
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -2
Query: 283 MLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKAT 164
+LRYKEK++ R + K IRYE RK A+ R R+KGRFVK T
Sbjct: 349 VLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRT 388
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 52 bits (122), Expect = 7e-007
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = -2
Query: 352 SDSLRTTGTKADMELLAQN--RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGR 179
S+++ A ++L + R ++LRYKEK++ R + K IRY+ RK AD R R+KGR
Sbjct: 362 SEAVDVNARLAQIDLFGDSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGR 421
Query: 178 FVK 170
FV+
Sbjct: 422 FVR 424
>TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-related |
chr1:2164327-2165133 REVERSE
Length = 196
Score = 51 bits (121), Expect = 9e-007
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -2
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVK 170
R ++LRYKEK+++R + K IRY+ RK AD R R KGRFVK
Sbjct: 151 REASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVK 192
>TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component
response regulator | chr5:8356204-8358873 REVERSE
Length = 668
Score = 49 bits (116), Expect = 4e-006
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
Frame = -2
Query: 295 RGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVK---ATEAP 155
R A+ +++ K+K+R Y+K +RYESRK A+ R R+KG+FV+ +T+AP
Sbjct: 618 REAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQSTQAP 667
>TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19233422-19234901
FORWARD
Length = 352
Score = 48 bits (113), Expect = 8e-006
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Frame = -2
Query: 397 DKGNIATTEGPFLIRSDSLRTTGTK----ADMELLAQNRGNAMLRYKEKKKNRRYDKHIR 230
+ G+ +T EG I S T K A R A+++++ K+K+R +DK +R
Sbjct: 265 EAGSQSTNEG---IAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVR 321
Query: 229 YESRKARADTRKRVKGRFVKATEA 158
Y+SRK A+ R RVKG+FV+ +
Sbjct: 322 YQSRKKLAEQRPRVKGQFVRTVNS 345
>TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 184
Score = 48 bits (113), Expect = 8e-006
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Frame = -2
Query: 397 DKGNIATTEGPFLIRSDSLRTTGTK----ADMELLAQNRGNAMLRYKEKKKNRRYDKHIR 230
+ G+ +T EG I S T K A R A+++++ K+K+R +DK +R
Sbjct: 97 EAGSQSTNEG---IAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVR 153
Query: 229 YESRKARADTRKRVKGRFVKATEA 158
Y+SRK A+ R RVKG+FV+ +
Sbjct: 154 YQSRKKLAEQRPRVKGQFVRTVNS 177
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,097,680,256
Number of Sequences: 33410
Number of Extensions: 1097680256
Number of Successful Extensions: 56500652
Number of sequences better than 0.0: 0
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