BLASTX 7.6.2
Query= RU04401 /QuerySize=1606
(1605 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G40830.2 | Symbols: RHC1A | RHC1A; protein bin... 301 9e-082
TAIR9_protein||AT2G40830.1 | Symbols: RHC1A | RHC1A; protein bin... 300 2e-081
TAIR9_protein||AT2G40830.3 | Symbols: RHC1A | RHC1A; protein bin... 300 2e-081
TAIR9_protein||AT3G56580.2 | Symbols: | zinc finger (C3HC4-type... 277 1e-074
TAIR9_protein||AT3G56580.1 | Symbols: | zinc finger (C3HC4-type... 277 1e-074
TAIR9_protein||AT3G56580.3 | Symbols: | zinc finger (C3HC4-type... 277 1e-074
TAIR9_protein||AT3G19950.1 | Symbols: | zinc finger (C3HC4-type... 148 1e-035
TAIR9_protein||AT3G10815.1 | Symbols: | zinc finger (C3HC4-type... 138 2e-032
TAIR9_protein||AT1G60360.1 | Symbols: | zinc finger (C3HC4-type... 124 3e-028
TAIR9_protein||AT3G13430.1 | Symbols: | zinc finger (C3HC4-type... 116 4e-026
TAIR9_protein||AT3G13430.2 | Symbols: | zinc finger (C3HC4-type... 116 4e-026
TAIR9_protein||AT1G55530.1 | Symbols: | zinc finger (C3HC4-type... 116 7e-026
TAIR9_protein||AT5G56340.1 | Symbols: ATCRT1 | zinc finger (C3HC... 114 2e-025
TAIR9_protein||AT5G59550.1 | Symbols: | zinc finger (C3HC4-type... 113 4e-025
TAIR9_protein||AT3G46620.1 | Symbols: | zinc finger (C3HC4-type... 113 5e-025
TAIR9_protein||AT4G26400.2 | Symbols: | zinc finger (C3HC4-type... 112 1e-024
TAIR9_protein||AT4G26400.1 | Symbols: | zinc finger (C3HC4-type... 112 1e-024
TAIR9_protein||AT5G01980.1 | Symbols: | zinc finger (C3HC4-type... 104 3e-022
TAIR9_protein||AT2G39720.1 | Symbols: RHC2A | RHC2A; protein bin... 100 3e-021
TAIR9_protein||AT1G68180.1 | Symbols: | zinc finger (C3HC4-type... 94 3e-019
TAIR9_protein||AT5G64920.1 | Symbols: CIP8 | CIP8 (COP1-INTERACT... 89 5e-018
TAIR9_protein||AT2G44330.1 | Symbols: | zinc finger (C3HC4-type... 85 1e-016
TAIR9_protein||AT5G15820.1 | Symbols: | zinc finger (C3HC4-type... 82 7e-016
TAIR9_protein||AT1G26800.1 | Symbols: | zinc finger (C3HC4-type... 82 9e-016
TAIR9_protein||AT5G20910.1 | Symbols: | zinc finger (C3HC4-type... 79 7e-015
TAIR9_protein||AT3G60080.1 | Symbols: | zinc finger (C3HC4-type... 78 2e-014
TAIR9_protein||AT3G02340.1 | Symbols: | zinc finger (C3HC4-type... 77 2e-014
TAIR9_protein||AT5G08139.1 | Symbols: | zinc finger (C3HC4-type... 77 4e-014
TAIR9_protein||AT5G60820.1 | Symbols: | zinc finger (C3HC4-type... 75 8e-014
TAIR9_protein||AT1G14200.1 | Symbols: | zinc finger (C3HC4-type... 73 5e-013
>TAIR9_protein||AT2G40830.2 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 329
Score = 301 bits (770), Expect = 9e-082
Identities = 170/323 (52%), Positives = 199/323 (61%), Gaps = 30/323 (9%)
Frame = -1
Query: 1206 MSSGRNTHWCYECRRPTQLQGRDAVCRNCSGGFVQELDDMVHISPL-------ADEDRDR 1048
MSS RNTHWC+ C+R +L G++ VC C GGFV+EL DM SP +RD+
Sbjct: 1 MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 59
Query: 1047 RFGFMDAFSAW--QQLTDRRGSENIRGRS-DLVPEHSPAFSPLLIFGGQIPVRF-GNGAF 880
F MDAFS + +L +R IRGR+ PE+ P +PLLIFGGQ+P R G+ A
Sbjct: 60 TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 119
Query: 879 EALFN-GSPGIGVTRGNVGDYFVGPGLEELFEQLSA-NDRRGPPPASRLSIDAMPTIKIT 706
EALFN GSPGIG+TRGN GDYF GPGLEELFEQLSA RRGPPPA R +IDA+PTIKI
Sbjct: 120 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 179
Query: 705 NKHLR-SDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQGS 529
+HLR SDS+CPVC+D+FELGSEA+QMPC H+YHSDCIVPWLVQHNSCPVCRQEL P S
Sbjct: 180 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL-PSAS 238
Query: 528 GSGHSS-------NIRSGGFGSNTGGRE-GQGRRNXXXXXXXXXXXXXXXXXXXXXXXXX 373
G S N RS S++ RE G RRN
Sbjct: 239 GPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTR 298
Query: 372 XXXTTRENSN------QMGYSGW 322
T+ EN N Q Y G+
Sbjct: 299 NSDTSDENHNYHQQQHQQSYMGY 321
>TAIR9_protein||AT2G40830.1 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 329
Score = 300 bits (767), Expect = 2e-081
Identities = 163/275 (59%), Positives = 190/275 (69%), Gaps = 24/275 (8%)
Frame = -1
Query: 1206 MSSGRNTHWCYECRRPTQLQGRDAVCRNCSGGFVQELDDMVHISPL-------ADEDRDR 1048
MSS RNTHWC+ C+R +L G++ VC C GGFV+EL DM SP +RD+
Sbjct: 1 MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 59
Query: 1047 RFGFMDAFSAW--QQLTDRRGSENIRGRS-DLVPEHSPAFSPLLIFGGQIPVRF-GNGAF 880
F MDAFS + +L +R IRGR+ PE+ P +PLLIFGGQ+P R G+ A
Sbjct: 60 TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 119
Query: 879 EALFN-GSPGIGVTRGNVGDYFVGPGLEELFEQLSA-NDRRGPPPASRLSIDAMPTIKIT 706
EALFN GSPGIG+TRGN GDYF GPGLEELFEQLSA RRGPPPA R +IDA+PTIKI
Sbjct: 120 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 179
Query: 705 NKHLR-SDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQGS 529
+HLR SDS+CPVC+D+FELGSEA+QMPC H+YHSDCIVPWLVQHNSCPVCRQEL P S
Sbjct: 180 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL-PSAS 238
Query: 528 GSGHSS-------NIRSGGFGSNTGGRE-GQGRRN 448
G S N RS S++ RE G RRN
Sbjct: 239 GPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRN 273
>TAIR9_protein||AT2G40830.3 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 329
Score = 300 bits (767), Expect = 2e-081
Identities = 163/275 (59%), Positives = 190/275 (69%), Gaps = 24/275 (8%)
Frame = -1
Query: 1206 MSSGRNTHWCYECRRPTQLQGRDAVCRNCSGGFVQELDDMVHISPL-------ADEDRDR 1048
MSS RNTHWC+ C+R +L G++ VC C GGFV+EL DM SP +RD+
Sbjct: 1 MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 59
Query: 1047 RFGFMDAFSAW--QQLTDRRGSENIRGRS-DLVPEHSPAFSPLLIFGGQIPVRF-GNGAF 880
F MDAFS + +L +R IRGR+ PE+ P +PLLIFGGQ+P R G+ A
Sbjct: 60 TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 119
Query: 879 EALFN-GSPGIGVTRGNVGDYFVGPGLEELFEQLSA-NDRRGPPPASRLSIDAMPTIKIT 706
EALFN GSPGIG+TRGN GDYF GPGLEELFEQLSA RRGPPPA R +IDA+PTIKI
Sbjct: 120 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 179
Query: 705 NKHLR-SDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQGS 529
+HLR SDS+CPVC+D+FELGSEA+QMPC H+YHSDCIVPWLVQHNSCPVCRQEL P S
Sbjct: 180 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL-PSAS 238
Query: 528 GSGHSS-------NIRSGGFGSNTGGRE-GQGRRN 448
G S N RS S++ RE G RRN
Sbjct: 239 GPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRN 273
>TAIR9_protein||AT3G56580.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 321
Score = 277 bits (708), Expect = 1e-074
Identities = 165/331 (49%), Positives = 192/331 (58%), Gaps = 45/331 (13%)
Frame = -1
Query: 1206 MSSGRNTHWCYECRRPTQLQGRDAVCRNCSGGFVQELDDMVHISPL---ADEDRDRRFGF 1036
MSS RNTHWC+ C+R L+ RDAVC C GGFV+E+D I P D +RD F
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRAHRDVERDPTFDL 56
Query: 1035 MDAFSAW--QQLTDRRGSENIRGRSDLVPEHSPAFS---PLLIFGGQIPVRFG---NGAF 880
M+AFSA+ +L +R I GR L S +FS PLLIFGGQ P R N +
Sbjct: 57 MEAFSAFMRSRLAERSYDREISGR--LGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSV 114
Query: 879 EALFNG-SPGIGVTRG-NVGDYFVGPGLEELFEQLSA-NDRRGPPPASRLSIDAMPTIKI 709
EA NG +PGIG+ RG N GDYF GPGLEEL EQLS+ RGPPPA + SIDA+PTIKI
Sbjct: 115 EAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKI 174
Query: 708 TNKHLR-SDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQG 532
T KHL+ SDSHCPVC+D+FEL SEA+QMPC H+YHSDCIVPWLVQHNSCPVCR+EL +G
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRG 234
Query: 531 SGSG-HSSNIRSGGFGSNTGGREGQGRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXTT- 358
S S SS RS T GRE RRN
Sbjct: 235 SSSSTQSSQNRS------TNGRENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNTATAEEG 288
Query: 357 ----------------RENSNQMGYSGWPFD 313
++ + MGYSGWPFD
Sbjct: 289 HYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319
>TAIR9_protein||AT3G56580.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 321
Score = 277 bits (708), Expect = 1e-074
Identities = 165/331 (49%), Positives = 192/331 (58%), Gaps = 45/331 (13%)
Frame = -1
Query: 1206 MSSGRNTHWCYECRRPTQLQGRDAVCRNCSGGFVQELDDMVHISPL---ADEDRDRRFGF 1036
MSS RNTHWC+ C+R L+ RDAVC C GGFV+E+D I P D +RD F
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRAHRDVERDPTFDL 56
Query: 1035 MDAFSAW--QQLTDRRGSENIRGRSDLVPEHSPAFS---PLLIFGGQIPVRFG---NGAF 880
M+AFSA+ +L +R I GR L S +FS PLLIFGGQ P R N +
Sbjct: 57 MEAFSAFMRSRLAERSYDREISGR--LGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSV 114
Query: 879 EALFNG-SPGIGVTRG-NVGDYFVGPGLEELFEQLSA-NDRRGPPPASRLSIDAMPTIKI 709
EA NG +PGIG+ RG N GDYF GPGLEEL EQLS+ RGPPPA + SIDA+PTIKI
Sbjct: 115 EAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKI 174
Query: 708 TNKHLR-SDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQG 532
T KHL+ SDSHCPVC+D+FEL SEA+QMPC H+YHSDCIVPWLVQHNSCPVCR+EL +G
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRG 234
Query: 531 SGSG-HSSNIRSGGFGSNTGGREGQGRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXTT- 358
S S SS RS T GRE RRN
Sbjct: 235 SSSSTQSSQNRS------TNGRENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNTATAEEG 288
Query: 357 ----------------RENSNQMGYSGWPFD 313
++ + MGYSGWPFD
Sbjct: 289 HYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319
>TAIR9_protein||AT3G56580.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 321
Score = 277 bits (708), Expect = 1e-074
Identities = 165/331 (49%), Positives = 192/331 (58%), Gaps = 45/331 (13%)
Frame = -1
Query: 1206 MSSGRNTHWCYECRRPTQLQGRDAVCRNCSGGFVQELDDMVHISPL---ADEDRDRRFGF 1036
MSS RNTHWC+ C+R L+ RDAVC C GGFV+E+D I P D +RD F
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRAHRDVERDPTFDL 56
Query: 1035 MDAFSAW--QQLTDRRGSENIRGRSDLVPEHSPAFS---PLLIFGGQIPVRFG---NGAF 880
M+AFSA+ +L +R I GR L S +FS PLLIFGGQ P R N +
Sbjct: 57 MEAFSAFMRSRLAERSYDREISGR--LGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSV 114
Query: 879 EALFNG-SPGIGVTRG-NVGDYFVGPGLEELFEQLSA-NDRRGPPPASRLSIDAMPTIKI 709
EA NG +PGIG+ RG N GDYF GPGLEEL EQLS+ RGPPPA + SIDA+PTIKI
Sbjct: 115 EAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKI 174
Query: 708 TNKHLR-SDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQG 532
T KHL+ SDSHCPVC+D+FEL SEA+QMPC H+YHSDCIVPWLVQHNSCPVCR+EL +G
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRG 234
Query: 531 SGSG-HSSNIRSGGFGSNTGGREGQGRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXTT- 358
S S SS RS T GRE RRN
Sbjct: 235 SSSSTQSSQNRS------TNGRENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNTATAEEG 288
Query: 357 ----------------RENSNQMGYSGWPFD 313
++ + MGYSGWPFD
Sbjct: 289 HYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319
>TAIR9_protein||AT3G19950.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:6942853-6943839 FORWARD
Length = 329
Score = 148 bits (373), Expect = 1e-035
Identities = 81/179 (45%), Positives = 104/179 (58%), Gaps = 7/179 (3%)
Frame = -1
Query: 978 RGRSDLVPEHSPAFSPLLIFGGQIPVRFGNGA-FEALFNGSPGIGVTR--GNVGDYFVGP 808
+ RS S AF P + +G FE + P R GN GDYF GP
Sbjct: 110 QARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGP 169
Query: 807 GLEELFEQLSAND--RRGPPPASRLSIDAMPTIKITNKHLRSD-SHCPVCQDKFELGSEA 637
GLE+L +QL+ ND R G PPAS+ +IDA+PT+K+T L+S+ + C VC D+FE GS+
Sbjct: 170 GLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDV 229
Query: 636 RQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQGSGSGHSSNIRSGGFGSNTGGREGQ 460
+QMPCKHV+H DC++PWL HNSCPVCR EL P + + S G G G EGQ
Sbjct: 230 KQMPCKHVFHQDCLLPWLELHNSCPVCRFEL-PTDDPDYENRSQGSQGSGDGQGSVEGQ 287
>TAIR9_protein||AT3G10815.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:3385009-3385608 REVERSE
Length = 200
Score = 138 bits (345), Expect = 2e-032
Identities = 66/116 (56%), Positives = 82/116 (70%), Gaps = 6/116 (5%)
Frame = -1
Query: 801 EELFEQLSA-NDRRGPPPASRLSIDAMPTIKITNKHLRSDSHCPVCQDKFELGSEARQMP 625
EELF +L A DRRGPPPAS +I+++ IKI KHL D +CPVCQD+FE+GS+AR+MP
Sbjct: 79 EELFNRLPALQDRRGPPPASLAAINSLQKIKIRQKHLGLDPYCPVCQDQFEIGSDARKMP 138
Query: 624 CKHVYHSDCIVPWLVQHNSCPVCRQELHPQGSGS-----GHSSNIRSGGFGSNTGG 472
CKH+YHS+CI+PWLVQ N+CPVCR+EL + S H RS G SN G
Sbjct: 139 CKHIYHSECILPWLVQRNTCPVCRKELPQDRNNSRKNPLWHLWPFRSSGLASNHNG 194
>TAIR9_protein||AT1G60360.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:22242748-22243731 REVERSE
Length = 328
Score = 124 bits (309), Expect = 3e-028
Identities = 54/99 (54%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Frame = -1
Query: 834 NVGDYFVG-PGLEELFEQLSANDRRGPPPASRLSIDAMPTIKITNKHLRSD-SHCPVCQD 661
N DYF G LE+L EQL+ +DR GPPPAS +I+++P++KIT +HL +D S C VC +
Sbjct: 170 NSHDYFTGASSLEQLIEQLTQDDRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCME 229
Query: 660 KFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQEL 544
+F +G +A ++PCKH+YH DCIVPWL +NSCP+CR++L
Sbjct: 230 EFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268
>TAIR9_protein||AT3G13430.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:4367754-4368701 FORWARD
Length = 316
Score = 116 bits (290), Expect = 4e-026
Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 7/101 (6%)
Frame = -1
Query: 846 VTRGNVGDYFVGPGLEELFEQLSAND---RRGPPPASRLSIDAMPTIKITNKHLRSDSHC 676
V G++GDYF+GPG E L ++L+ ND R G PPA++ +++A+ +KI + L+ C
Sbjct: 170 VPSGSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ----C 225
Query: 675 PVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCR 553
VC D FE+G EA++MPCKH +HSDC++PWL H+SCPVCR
Sbjct: 226 SVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 266
>TAIR9_protein||AT3G13430.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:4367754-4368701 FORWARD
Length = 316
Score = 116 bits (290), Expect = 4e-026
Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 7/101 (6%)
Frame = -1
Query: 846 VTRGNVGDYFVGPGLEELFEQLSAND---RRGPPPASRLSIDAMPTIKITNKHLRSDSHC 676
V G++GDYF+GPG E L ++L+ ND R G PPA++ +++A+ +KI + L+ C
Sbjct: 170 VPSGSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ----C 225
Query: 675 PVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCR 553
VC D FE+G EA++MPCKH +HSDC++PWL H+SCPVCR
Sbjct: 226 SVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 266
>TAIR9_protein||AT1G55530.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:20729472-20730527 REVERSE
Length = 352
Score = 116 bits (288), Expect = 7e-026
Identities = 56/125 (44%), Positives = 78/125 (62%), Gaps = 8/125 (6%)
Frame = -1
Query: 846 VTRGNVGDYFVGPGLEELFEQLSAND--RRGPPPASRLSIDAMPTIKITNKHLRSDSHCP 673
V G++GDYF+GPG E L ++L+ ND R G PPA + +++A+ T+KI C
Sbjct: 170 VPAGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKI-----EETLQCS 224
Query: 672 VCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQGSGSGHSSNIRSGG 493
VC D FE+G+EA+ MPC H +HSDC++PWL H+SCPVCR +L P S S
Sbjct: 225 VCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQL-PADEAKTDSVTTTSDN 283
Query: 492 FGSNT 478
GS++
Sbjct: 284 NGSSS 288
>TAIR9_protein||AT5G56340.1 | Symbols: ATCRT1 | zinc finger (C3HC4-type RING
finger) family protein | chr5:22818254-22819444 FORWARD
Length = 397
Score = 114 bits (284), Expect = 2e-025
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 7/99 (7%)
Frame = -1
Query: 834 NVGDYFVGPGLEELFEQLSAND--RRGPPPASRLSIDAMPTIKITNKHLRSDSHCPVCQD 661
++GDYF+GPGL+ L + L+ ND R+G PPA + +++A+PT+KI C VC D
Sbjct: 210 SLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKI-----MEPLQCSVCLD 264
Query: 660 KFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQEL 544
FE G+EA++MPCKH +H CIVPWL H+SCPVCR EL
Sbjct: 265 DFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 303
>TAIR9_protein||AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
Length = 408
Score = 113 bits (282), Expect = 4e-025
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 9/123 (7%)
Frame = -1
Query: 885 AFEALFNGSPGIGV--TRGNVGDYFVGPGLEELFEQLSAND-------RRGPPPASRLSI 733
AFE ++ G G+ +V + +G G E L EQLS + R G PPAS+ +I
Sbjct: 121 AFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAI 180
Query: 732 DAMPTIKITNKHLRSDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCR 553
+++P ++I++ H+ S+++C VC + FE +EAR+MPCKH++H DCIVPWL NSCPVCR
Sbjct: 181 ESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCR 240
Query: 552 QEL 544
EL
Sbjct: 241 FEL 243
>TAIR9_protein||AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
Length = 396
Score = 113 bits (281), Expect = 5e-025
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 9/123 (7%)
Frame = -1
Query: 885 AFEALFNGSPGIGV--TRGNVGDYFVGPGLEELFEQLSAND-------RRGPPPASRLSI 733
A+E ++ G G+ +V + +G G E L EQLS + R G PPAS+ +I
Sbjct: 137 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 196
Query: 732 DAMPTIKITNKHLRSDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCR 553
+++P ++I++ H +++++C VC + FE G E R+MPCKH++H DCIVPWL NSCPVCR
Sbjct: 197 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 256
Query: 552 QEL 544
EL
Sbjct: 257 FEL 259
>TAIR9_protein||AT4G26400.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13344953-13346023 REVERSE
Length = 357
Score = 112 bits (278), Expect = 1e-024
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 12/120 (10%)
Frame = -1
Query: 876 ALFNGSPGIGVTRGN-----VGDYFVGPGLEELFEQLSAND--RRGPPPASRLSIDAMPT 718
A+ GS + R N +GDYFVG L+ L E L+ ND R G PA + +D +PT
Sbjct: 173 AVVQGSTSLNQNRNNTSLSAIGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPT 232
Query: 717 IKITNKHLRSDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHP 538
+KI+ C +C D F+ GSEA++MPCKH +H CIVPWL H+SCPVCR EL P
Sbjct: 233 VKIS-----ESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPP 287
>TAIR9_protein||AT4G26400.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13344953-13346023 REVERSE
Length = 357
Score = 112 bits (278), Expect = 1e-024
Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 12/120 (10%)
Frame = -1
Query: 876 ALFNGSPGIGVTRGN-----VGDYFVGPGLEELFEQLSAND--RRGPPPASRLSIDAMPT 718
A+ GS + R N +GDYFVG L+ L E L+ ND R G PA + +D +PT
Sbjct: 173 AVVQGSTSLNQNRNNTSLSAIGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPT 232
Query: 717 IKITNKHLRSDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHP 538
+KI+ C +C D F+ GSEA++MPCKH +H CIVPWL H+SCPVCR EL P
Sbjct: 233 VKIS-----ESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPP 287
>TAIR9_protein||AT5G01980.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:375542-377023 FORWARD
Length = 494
Score = 104 bits (257), Expect = 3e-022
Identities = 48/99 (48%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = -1
Query: 834 NVGDYFVGPGLEELFEQL--SANDRRGPPPASRLSIDAMPTIKITNKHLRSDSHCPVCQD 661
NVGDY G +EL EQL S N RRG PPAS + +P + I +H+ C +C++
Sbjct: 296 NVGDYLDERGFDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIAEEHVMKGLVCAICKE 355
Query: 660 KFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQEL 544
F L +E Q+PC H+YH+ CIVPWL NSCP+CR EL
Sbjct: 356 LFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYEL 394
>TAIR9_protein||AT2G39720.1 | Symbols: RHC2A | RHC2A; protein binding / zinc ion
binding | chr2:16567506-16568711 REVERSE
Length = 402
Score = 100 bits (248), Expect = 3e-021
Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = -1
Query: 756 PPASRLSIDAMPTIKITNKHLRSD--SHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWL 583
PPAS+ +I+A+P I+I HL SD SHC VC++ F L S AR+MPC H+YH DCI+PWL
Sbjct: 173 PPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWL 232
Query: 582 VQHNSCPVCRQEL 544
NSCPVCR EL
Sbjct: 233 AIRNSCPVCRHEL 245
>TAIR9_protein||AT1G68180.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:25554816-25555562 FORWARD
Length = 249
Score = 94 bits (231), Expect = 3e-019
Identities = 42/103 (40%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Frame = -1
Query: 801 EELFEQLSANDRRGPPPASRLSIDAMPTIKITNKHLRSDSHCPVCQDKFELGSEARQMPC 622
+E F + + + GPPPAS+ +I+A+ T+ IT++ L + C +C+++FE+G E +++ C
Sbjct: 97 DEEFADVMPSVQIGPPPASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKC 156
Query: 621 KHVYHSDCIVPWLVQHNSCPVCRQELHPQGSGSGHSSNIRSGG 493
H+YHS CIV WL HN+CP+CR E++ S SN+ GG
Sbjct: 157 LHLYHSSCIVSWLNIHNTCPICRFEVNLGVS----ESNVDEGG 195
>TAIR9_protein||AT5G64920.1 | Symbols: CIP8 | CIP8 (COP1-INTERACTING PROTEIN 8);
protein binding / zinc ion binding | chr5:25944338-25945342 REVERSE
Length = 335
Score = 89 bits (220), Expect = 5e-018
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Frame = -1
Query: 837 GNVGDYF-VGPGLEELFEQLSAND------RRGPPPASRLSIDAMPTIKITNKHLRSDSH 679
GN DY G E L + L+ D RRG PPA++ +I+A+ T ++++
Sbjct: 197 GNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMV 256
Query: 678 CPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQEL 544
C VC+D +G +++PC H YH DCIVPWL NSCPVCR +L
Sbjct: 257 CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQL 301
>TAIR9_protein||AT2G44330.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:18310621-18311163 FORWARD
Length = 181
Score = 85 bits (208), Expect = 1e-016
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 6/70 (8%)
Frame = -1
Query: 735 IDAMPTIKITNKHLRSDSH------CPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQH 574
++++PTIKI++ L S S C +C++ F +G AR++PC H+YH+DCI+PWL H
Sbjct: 71 MESLPTIKISSSMLSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSH 130
Query: 573 NSCPVCRQEL 544
NSCP+CR EL
Sbjct: 131 NSCPLCRVEL 140
>TAIR9_protein||AT5G15820.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:5161787-5162833 FORWARD
Length = 349
Score = 82 bits (202), Expect = 7e-016
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = -1
Query: 765 RGPPPASRLSIDAMPTIKITNKHLRSDS-HCPVCQDKFELGSEARQMPCKHVYHSDCIVP 589
+G PPAS+ +D +P +++T + L S S C +C+D+ + +++PCKH YH +CI+P
Sbjct: 261 KGTPPASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIP 320
Query: 588 WLVQHNSCPVCRQEL 544
WL N+CPVCR EL
Sbjct: 321 WLGIRNTCPVCRHEL 335
>TAIR9_protein||AT1G26800.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:9285576-9286190 REVERSE
Length = 205
Score = 82 bits (201), Expect = 9e-016
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = -1
Query: 807 GLEELFEQLSANDRRGPPPASRLSIDAMPTIKITNKHLRSDSHCPVCQDKFELGSEARQM 628
G+ L L + G PPAS+ SIDAMP ++I + C +C ++++ ++M
Sbjct: 74 GMNPLLRSLLESREEGRPPASKASIDAMPIVEIDG----CEGECVICLEEWKSEETVKEM 129
Query: 627 PCKHVYHSDCIVPWLVQHNSCPVCRQELHPQGSGSGHSSN 508
PCKH +H CI WL H SCPVCR E+ G G N
Sbjct: 130 PCKHRFHGGCIEKWLGFHGSCPVCRYEMPVDGDEIGKKRN 169
>TAIR9_protein||AT5G20910.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:7092663-7094310 REVERSE
Length = 311
Score = 79 bits (193), Expect = 7e-015
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Frame = -1
Query: 771 DRRGP---PPASRLSIDAMPTIKITNKHLR---SDSHCPVCQDKFELGSEARQMPCKHVY 610
D GP PPAS+ ++ +P I T + L+ +++ C +C++ +G + +++PCKH +
Sbjct: 193 DDGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTF 252
Query: 609 HSDCIVPWLVQHNSCPVCRQEL 544
H C+ PWL +HNSCP+CR EL
Sbjct: 253 HPPCLKPWLDEHNSCPICRHEL 274
>TAIR9_protein||AT3G60080.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:22187635-22188555 FORWARD
Length = 307
Score = 78 bits (190), Expect = 2e-014
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -1
Query: 678 CPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQEL 544
C VC++ F +G AR++PC H+YHSDCIVPWL HNSCP+CR EL
Sbjct: 169 CAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFEL 213
>TAIR9_protein||AT3G02340.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:477032-478261 FORWARD
Length = 410
Score = 77 bits (189), Expect = 2e-014
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = -1
Query: 765 RGPPPASRLSIDAMPTIKITNKHL-RSDSHCPVCQDKFELGSEARQMPCKHVYHSDCIVP 589
RG PPA++ I +P +++ + L + ++ C VC+D+ + + R++PC H YH +CI+P
Sbjct: 305 RGNPPAAKSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIP 364
Query: 588 WLVQHNSCPVCRQEL 544
WL N+CPVCR EL
Sbjct: 365 WLGIRNTCPVCRYEL 379
>TAIR9_protein||AT5G08139.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:2616487-2617617 FORWARD
Length = 377
Score = 77 bits (187), Expect = 4e-014
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = -1
Query: 795 LFEQLSANDRR--GPPPASRLSIDAMPTIKITNKHLRSDS-HCPVCQDKFELGSEARQMP 625
LFEQ + + G PP S+ ++ +P + + ++ C VC+D+ +G++A Q+P
Sbjct: 267 LFEQFADAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLP 326
Query: 624 CKHVYHSDCIVPWLVQHNSCPVCRQEL 544
C H YHS+CIVPWL N+CPVCR EL
Sbjct: 327 CNHKYHSECIVPWLKVRNTCPVCRYEL 353
>TAIR9_protein||AT5G60820.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:24469636-24470895 FORWARD
Length = 420
Score = 75 bits (184), Expect = 8e-014
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Frame = -1
Query: 825 DYFVGPGLEELFEQLSANDRRGPPPASRLSIDAMPTIKITNKHLRSDSH----CPVCQDK 658
DY E LFE + G PPAS+ I + ++N+ + + C VC+++
Sbjct: 320 DYLHTTEYEMLFE-AEISSGIGKPPASKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEE 378
Query: 657 FELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQEL 544
+G E ++PC+H YHS+CIVPWL N+CPVCR EL
Sbjct: 379 MIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFEL 416
>TAIR9_protein||AT1G14200.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:4854532-4855071 REVERSE
Length = 180
Score = 73 bits (177), Expect = 5e-013
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = -1
Query: 807 GLEELFEQLSANDRRGPPPASRLSIDAMPTIKITNKHLRSDSHCPVCQDKFELGSEARQM 628
GL++ F S ++G PA + ++ MP + I + C +C D++ G A +M
Sbjct: 69 GLDDFF---SDGGKQGRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEM 125
Query: 627 PCKHVYHSDCIVPWLVQHNSCPVCRQEL 544
PCKH +HS C+ WL +H +CP+CR E+
Sbjct: 126 PCKHKFHSKCVEEWLGRHATCPMCRYEM 153
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,153,850,919
Number of Sequences: 33410
Number of Extensions: 1153850919
Number of Successful Extensions: 61422046
Number of sequences better than 0.0: 0
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