BLASTX 7.6.2
Query= RU04537 /QuerySize=372
(371 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding... 73 4e-014
TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding... 73 4e-014
TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding... 73 4e-014
TAIR9_protein||AT5G67580.1 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3... 70 3e-013
TAIR9_protein||AT5G67580.2 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3... 70 3e-013
TAIR9_protein||AT3G49850.1 | Symbols: TRB3, ATTRB3, TBP2 | TRB3 ... 65 1e-011
TAIR9_protein||AT1G72740.1 | Symbols: | DNA-binding family prot... 59 7e-010
TAIR9_protein||AT1G72740.2 | Symbols: | DNA-binding family prot... 59 7e-010
TAIR9_protein||AT1G17520.1 | Symbols: | DNA-binding protein, pu... 57 3e-009
>TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 73 bits (178), Expect = 4e-014
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MGAPKQKW EEE+ALK+GV+KHG GKWRTILKDPEF+
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFS 38
>TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 73 bits (178), Expect = 4e-014
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MGAPKQKW EEE+ALK+GV+KHG GKWRTILKDPEF+
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFS 38
>TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 73 bits (178), Expect = 4e-014
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MGAPKQKW EEE+ALK+GV+KHG GKWRTILKDPEF+
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFS 38
>TAIR9_protein||AT5G67580.1 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 | TRB2; DNA
binding / double-stranded telomeric DNA binding / protein
homodimerization/ single-stranded telomeric DNA binding / transcription
factor | chr5:26955843-26957073 REVERSE
Length = 300
Score = 70 bits (170), Expect = 3e-013
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MGAPKQKW EEEAALKAGV+KHG GKWRTIL D EF+
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFS 38
>TAIR9_protein||AT5G67580.2 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 | TRB2; DNA
binding / double-stranded telomeric DNA binding / protein
homodimerization/ single-stranded telomeric DNA binding / transcription
factor | chr5:26955843-26957073 REVERSE
Length = 300
Score = 70 bits (170), Expect = 3e-013
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MGAPKQKW EEEAALKAGV+KHG GKWRTIL D EF+
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFS 38
>TAIR9_protein||AT3G49850.1 | Symbols: TRB3, ATTRB3, TBP2 | TRB3 (TELOMERE
REPEAT BINDING FACTOR 3); DNA binding / double-stranded telomeric DNA
binding / protein homodimerization/ single-stranded telomeric DNA
binding / transcription factor | chr3:18489451-18490731 FORWARD
Length = 296
Score = 65 bits (157), Expect = 1e-011
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MGAPK KW EEE ALKAGV+KHG GKWRTIL DP ++
Sbjct: 1 MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYS 38
>TAIR9_protein||AT1G72740.1 | Symbols: | DNA-binding family protein / histone
H1/H5 family protein | chr1:27380499-27382687 REVERSE
Length = 288
Score = 59 bits (141), Expect = 7e-010
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MG K KW AEEE AL AG+ KHG GKW+ IL+DPEFA
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFA 38
>TAIR9_protein||AT1G72740.2 | Symbols: | DNA-binding family protein / histone
H1/H5 family protein | chr1:27380499-27382687 REVERSE
Length = 282
Score = 59 bits (141), Expect = 7e-010
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MG K KW AEEE AL AG+ KHG GKW+ IL+DPEFA
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFA 38
>TAIR9_protein||AT1G17520.1 | Symbols: | DNA-binding protein, putative |
chr1:6024959-6027224 REVERSE
Length = 297
Score = 57 bits (136), Expect = 3e-009
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = +1
Query: 253 MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFA 366
MG K KW AEEE AL AGV KHG GKW+ IL+DPE A
Sbjct: 1 MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELA 38
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,153,850,919
Number of Sequences: 33410
Number of Extensions: 1153850919
Number of Successful Extensions: 61422046
Number of sequences better than 0.0: 0
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