BLASTX 7.6.2
Query= RU05023 /QuerySize=725
(724 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G02555.1 | Symbols: | unknown protein | chr3:... 71 5e-013
TAIR9_protein||AT5G16110.1 | Symbols: | unknown protein | chr5:... 57 1e-008
TAIR9_protein||AT1G13390.1 | Symbols: | unknown protein | chr1:... 54 9e-008
TAIR9_protein||AT1G13390.2 | Symbols: | unknown protein | chr1:... 54 9e-008
TAIR9_protein||AT1G68490.1 | Symbols: | unknown protein | chr1:... 51 6e-007
>TAIR9_protein||AT3G02555.1 | Symbols: | unknown protein | chr3:540024-540955
REVERSE
Length = 163
Score = 71 bits (173), Expect = 5e-013
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Frame = +2
Query: 431 RASNPVIQDEQFGSSKVG------GPFSPTAVR-NGGCVRMKSGDKPVAVRIEGFDCLSR 589
RA+NP+ QD +FG K+ P P+A R GC RMK G KP VR+EGFDCL+R
Sbjct: 92 RAANPLAQDARFGDEKLNTVSPSLSPLLPSASRVKSGCGRMKFGVKPATVRVEGFDCLNR 151
Query: 590 DRRNCSIPSVA* 625
DR N SIP++A*
Sbjct: 152 DRPNSSIPAMA* 163
>TAIR9_protein||AT5G16110.1 | Symbols: | unknown protein | chr5:5261171-5262668
REVERSE
Length = 245
Score = 57 bits (136), Expect = 1e-008
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Frame = +2
Query: 104 QGVLC*KICEEMNRFGSYEQNAMTGFE---GMKMVDSVVCPKPRRLSALNPSLNDSIRPP 274
Q C ++MN + +QNA E G D VVCPKPRR+ L N+ IRP
Sbjct: 56 QAFFCGSEVKKMNHC-NLQQNAFMSREEMMGFDRKDLVVCPKPRRVGLL---ANNVIRPL 111
Query: 275 CRFFNHYQSEIEDSQAASELLDLILNKGDSGGERSMKQLAXXXXXXXXXXXXRASNPVIQ 454
+ +++ DS+A +ELL++I K D+G + L+ RA+NP+ Q
Sbjct: 112 RLHMSQAAADLCDSKAGAELLEIIRRKEDNGTIGQL--LSSSPPYFPGSPPSRAANPLAQ 169
Query: 455 DEQFGSSKVGGPFSPTA 505
D +F K+ P SP +
Sbjct: 170 DARFRDEKL-NPISPNS 185
Score = 54 bits (129), Expect = 7e-008
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +2
Query: 494 SPTAVRNGGCVRMKSGDKPVAVRIEGFDCLSRDRRNCSIPSVA* 625
S ++ + GCVRMK G AVR+EGFDCL+RDR+N SIP++A*
Sbjct: 202 SSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNRDRQNSSIPAMA* 245
>TAIR9_protein||AT1G13390.1 | Symbols: | unknown protein | chr1:4592829-4593549
REVERSE
Length = 177
Score = 54 bits (128), Expect = 9e-008
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +2
Query: 200 DSVVCPKPRRLSALNPSLNDSIRPPCRFFNHYQSEIEDSQAASELLDLILNKGDSGG--E 373
D+V+CPKPRR+ ALN + S+ R+ ++Q E+ +S + SE+LD IL KG GG +
Sbjct: 26 DAVICPKPRRVGALNHHSSRSL----RWQLNHQMELCESNSGSEILDFILTKGGGGGGEQ 81
Query: 374 RSMKQLAXXXXXXXXXXXXRASNPVIQDEQF 466
+ + R SNP+ +D F
Sbjct: 82 DQTRTVMTPPLFFTGSPPSRVSNPLTKDSLF 112
>TAIR9_protein||AT1G13390.2 | Symbols: | unknown protein | chr1:4592829-4593549
REVERSE
Length = 177
Score = 54 bits (128), Expect = 9e-008
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +2
Query: 200 DSVVCPKPRRLSALNPSLNDSIRPPCRFFNHYQSEIEDSQAASELLDLILNKGDSGG--E 373
D+V+CPKPRR+ ALN + S+ R+ ++Q E+ +S + SE+LD IL KG GG +
Sbjct: 26 DAVICPKPRRVGALNHHSSRSL----RWQLNHQMELCESNSGSEILDFILTKGGGGGGEQ 81
Query: 374 RSMKQLAXXXXXXXXXXXXRASNPVIQDEQF 466
+ + R SNP+ +D F
Sbjct: 82 DQTRTVMTPPLFFTGSPPSRVSNPLTKDSLF 112
>TAIR9_protein||AT1G68490.1 | Symbols: | unknown protein |
chr1:25693926-25694946 FORWARD
Length = 184
Score = 51 bits (121), Expect = 6e-007
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Frame = +2
Query: 494 SPTAVRNGGC-VRMKSGDKPVAVRIEGFDCLSRDRRNCSIPSVA* 625
S ++ R GGC VR G+ P VR+EGFDCL RD RNCSIP++A*
Sbjct: 141 SSSSGRKGGCVVRGNFGNSP-KVRVEGFDCLDRDSRNCSIPALA* 184
Score = 49 bits (116), Expect = 2e-006
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = +2
Query: 203 SVVCPKPRRLSALNPSLNDSIRPPCRFFNHYQSEIEDSQAASELLDLILNKGDSGGERSM 382
+VVCPKPRR+ N + S C +F+H Q E+ +S+A +++LD+IL K G E+
Sbjct: 31 TVVCPKPRRIGLRNNHHHPSRSLRC-YFSH-QLELCESKAETDILDIILTKDGYGAEQVN 88
Query: 383 KQLAXX-XXXXXXXXXXRASNPVIQDEQF 466
KQ+ R +NP+ QD +F
Sbjct: 89 KQVIDSPSPFLCGSPPSRVANPLTQDARF 117
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,269,989,486
Number of Sequences: 33410
Number of Extensions: 1269989486
Number of Successful Extensions: 71327439
Number of sequences better than 0.0: 0
|