BLASTX 7.6.2
Query= RU05178 /QuerySize=1677
(1676 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G27090.1 | Symbols: | FUNCTIONS IN: molecular... 436 2e-122
TAIR9_protein||AT5G42050.1 | Symbols: | FUNCTIONS IN: molecular... 258 1e-068
TAIR9_protein||AT5G01660.1 | Symbols: | FUNCTIONS IN: molecular... 99 7e-021
TAIR9_protein||AT3G11000.1 | Symbols: | LOCATED IN: endomembran... 94 2e-019
TAIR9_protein||AT3G11000.2 | Symbols: | EXPRESSED IN: 9 plant s... 94 2e-019
TAIR9_protein||AT5G61910.1 | Symbols: | FUNCTIONS IN: molecular... 91 3e-018
TAIR9_protein||AT5G61910.2 | Symbols: | FUNCTIONS IN: molecular... 91 3e-018
TAIR9_protein||AT5G61910.3 | Symbols: | FUNCTIONS IN: molecular... 91 3e-018
TAIR9_protein||AT2G32910.1 | Symbols: | FUNCTIONS IN: molecular... 80 3e-015
TAIR9_protein||AT2G35140.1 | Symbols: | FUNCTIONS IN: molecular... 79 6e-015
TAIR9_protein||AT2G35140.2 | Symbols: | FUNCTIONS IN: molecular... 79 6e-015
TAIR9_protein||AT2G35140.3 | Symbols: | FUNCTIONS IN: molecular... 79 6e-015
>TAIR9_protein||AT3G27090.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Development and cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G42050.1); Has 642 Blast hits to 564 proteins
in 35 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0;
Plants - 155; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).
| chr3:9990020-9991407 FORWARD
Length = 297
Score = 436 bits (1121), Expect = 2e-122
Identities = 219/298 (73%), Positives = 240/298 (80%), Gaps = 7/298 (2%)
Frame = +3
Query: 321 TYWQLGDELRGQSKVAEDHKWLMVASKLAEQTRSKGERMNNLDLSKGPTETRARDKFGFQ 500
++WQLGDELRGQ++ +EDHKW VA+KLAEQTR KGERMNNLDLSKG TE R +KF FQ
Sbjct: 3 SFWQLGDELRGQTRASEDHKWSTVATKLAEQTRMKGERMNNLDLSKGYTEFRPSEKFSFQ 62
Query: 501 EDNKFESLNFNMLNLDSKVNENV-SKSSFRNGIYNMNAVYQKNSASFVGNMTGNKYNGNH 677
E+N LNFNMLNLD K E++ K+S ++ +YNMN V+QKN GNM NKYNGN
Sbjct: 63 ENN----LNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSGGNMKVNKYNGNV 118
Query: 678 LXXXXXXXXXXXX--XXXXXXXXXXXXRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDL 851
+ RFKTLPA+ETLPRNEVLGGYIFVCNNDTMQED+
Sbjct: 119 VANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNNDTMQEDM 178
Query: 852 KRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSFGGSNIDPTAWEDKKCKG 1031
KR LFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEA++FGG+NID TAWEDKKCKG
Sbjct: 179 KRHLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEATTFGGTNIDATAWEDKKCKG 238
Query: 1032 ESRFPAQVRICVRKICKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSA 1205
ESRFPAQVRI VRKICKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSA
Sbjct: 239 ESRFPAQVRIRVRKICKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSA 296
>TAIR9_protein||AT5G42050.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species:
Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157;
Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink). |
chr5:16815630-16816932 FORWARD
Length = 350
Score = 258 bits (657), Expect = 1e-068
Identities = 140/251 (55%), Positives = 165/251 (65%), Gaps = 10/251 (3%)
Frame = +3
Query: 453 SKGPTETRARDKFG--FQEDNKFESLNFNM--LNLDSKVNENVSK---SSFRNGIYNMNA 611
SK + DKF F + KF S+N N+ + S VN + +K +S + YN+N
Sbjct: 96 SKSTVDLNPIDKFNSPFNDTWKFNSVNVNVNGYSPSSAVNGDFNKGVYTSMKKYGYNVNL 155
Query: 612 VYQKNSASFVGNMTGNKYNGNHLXXXXXXXXXXXXXXXXXXXXXXXXRFKTLPATETLPR 791
KN+ G ++ RFKTLP E LPR
Sbjct: 156 ---KNNNKNKGIDEDHQIQKGGKKNRKNQQNNNNQRNEDDKNNGLDKRFKTLPPAEALPR 212
Query: 792 NEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEA 971
NE +GGYIFVCNNDTM+E+LKRQLFGLPPRYRDSVRAITPGLPLFLYNY+THQLHGI+EA
Sbjct: 213 NETIGGYIFVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEA 272
Query: 972 SSFGGSNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVLHHYDGPKFRLEL 1151
+SFGG+NI+ A+EDKKC GESRFPAQVR RK+C LEEDSFRP+LHHYDGPKFRLEL
Sbjct: 273 ASFGGTNIELNAFEDKKCPGESRFPAQVRAITRKVCLPLEEDSFRPILHHYDGPKFRLEL 332
Query: 1152 SVPETLDLLDL 1184
SVPE L LLD+
Sbjct: 333 SVPEVLSLLDI 343
>TAIR9_protein||AT5G01660.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kelch repeat type
1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller
(InterPro:IPR011043), Development and cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G11000.2); Has 12390 Blast hits to
5423 proteins in 323 species: Archae - 22; Bacteria - 787; Metazoa -
8729; Fungi - 223; Plants - 966; Viruses - 639; Other Eukaryotes - 1024
(source: NCBI BLink). | chr5:244504-248442 REVERSE
Length = 657
Score = 99 bits (245), Expect = 7e-021
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Frame = +3
Query: 801 LGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSF 980
LGG +F C +T++E + +QLFGLP + V+ I GLPLFL+NY+ LHGIFEA+
Sbjct: 18 LGGVVFGCTKNTIKECMSKQLFGLPSNHYPYVQKIDIGLPLFLFNYSDRTLHGIFEAAGC 77
Query: 981 GGSNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVL--HHYDGPKFRLELS 1154
G N DP W + S +PAQV I VR C+ L E+ F+P + ++Y F EL
Sbjct: 78 GQLNFDPYGWTSDGSERTS-YPAQVPISVRLQCEPLSEEKFKPAIADNYYSSHHFWFELD 136
Query: 1155 VPETLDL 1175
+T L
Sbjct: 137 HFQTRKL 143
>TAIR9_protein||AT3G11000.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Development and cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G01660.1); Has 173 Blast hits to 164 proteins in 29 species:
Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 4; Plants - 153; Viruses
- 1; Other Eukaryotes - 7 (source: NCBI BLink). | chr3:3448442-3450283
FORWARD
Length = 489
Score = 94 bits (232), Expect = 2e-019
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Frame = +3
Query: 801 LGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSF 980
L G IF C T++E + LFGLP + ++ I PGL LFL+NY+ LHGIFEA+S
Sbjct: 11 LCGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIFEAASE 70
Query: 981 GGSNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVL--HHYDGPKFRLELS 1154
G NID AW S +PAQV++ VR C+ L E+ F PV+ ++ D F EL
Sbjct: 71 GKLNIDSKAWSPNG-TDPSPYPAQVKVRVRVRCEPLPEEKFSPVIVENYNDDKMFWFELD 129
Query: 1155 VPETLDLLDLCEQAGS 1202
+T LL L + + S
Sbjct: 130 RGQTNKLLRLFKPSPS 145
>TAIR9_protein||AT3G11000.2 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Development and cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G01660.1). | chr3:3447847-3450283 FORWARD
Length = 608
Score = 94 bits (232), Expect = 2e-019
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Frame = +3
Query: 801 LGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSF 980
L G IF C T++E + LFGLP + ++ I PGL LFL+NY+ LHGIFEA+S
Sbjct: 130 LCGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIFEAASE 189
Query: 981 GGSNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVL--HHYDGPKFRLELS 1154
G NID AW S +PAQV++ VR C+ L E+ F PV+ ++ D F EL
Sbjct: 190 GKLNIDSKAWSPNG-TDPSPYPAQVKVRVRVRCEPLPEEKFSPVIVENYNDDKMFWFELD 248
Query: 1155 VPETLDLLDLCEQAGS 1202
+T LL L + + S
Sbjct: 249 RGQTNKLLRLFKPSPS 264
>TAIR9_protein||AT5G61910.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Development and cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2453
proteins in 312 species: Archae - 1; Bacteria - 477; Metazoa - 1792;
Fungi - 482; Plants - 477; Viruses - 8; Other Eukaryotes - 814 (source:
NCBI BLink). | chr5:24861091-24863729 REVERSE
Length = 739
Score = 91 bits (223), Expect = 3e-018
Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Frame = +3
Query: 783 LPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGI 962
L +E L GYIF+CN T + + ++FG+P +D V +I PG+ LFLY++ L+G+
Sbjct: 55 LDHHEQLPGYIFMCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGV 114
Query: 963 FEASSFGGSNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVLH-HYDGPKF 1139
+EA+ G +I+P A+E K +PAQV + C L E++F+ ++ +Y G KF
Sbjct: 115 YEATVGGRLDIEPEAFEGK-------YPAQVGFRIVMNCLPLTENTFKSAIYENYKGSKF 167
Query: 1140 RLELSVPETLDLLDL 1184
+ ELS + + LL L
Sbjct: 168 KQELSPHQVMSLLSL 182
>TAIR9_protein||AT5G61910.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Development and cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2453
proteins in 312 species: Archae - 1; Bacteria - 477; Metazoa - 1792;
Fungi - 482; Plants - 477; Viruses - 8; Other Eukaryotes - 814 (source:
NCBI BLink). | chr5:24861091-24863729 REVERSE
Length = 739
Score = 91 bits (223), Expect = 3e-018
Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Frame = +3
Query: 783 LPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGI 962
L +E L GYIF+CN T + + ++FG+P +D V +I PG+ LFLY++ L+G+
Sbjct: 55 LDHHEQLPGYIFMCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGV 114
Query: 963 FEASSFGGSNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVLH-HYDGPKF 1139
+EA+ G +I+P A+E K +PAQV + C L E++F+ ++ +Y G KF
Sbjct: 115 YEATVGGRLDIEPEAFEGK-------YPAQVGFRIVMNCLPLTENTFKSAIYENYKGSKF 167
Query: 1140 RLELSVPETLDLLDL 1184
+ ELS + + LL L
Sbjct: 168 KQELSPHQVMSLLSL 182
>TAIR9_protein||AT5G61910.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Development and cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2448
proteins in 312 species: Archae - 1; Bacteria - 479; Metazoa - 1786;
Fungi - 481; Plants - 479; Viruses - 8; Other Eukaryotes - 817 (source:
NCBI BLink). | chr5:24861091-24863741 REVERSE
Length = 743
Score = 91 bits (223), Expect = 3e-018
Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Frame = +3
Query: 783 LPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGI 962
L +E L GYIF+CN T + + ++FG+P +D V +I PG+ LFLY++ L+G+
Sbjct: 59 LDHHEQLPGYIFMCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGV 118
Query: 963 FEASSFGGSNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVLH-HYDGPKF 1139
+EA+ G +I+P A+E K +PAQV + C L E++F+ ++ +Y G KF
Sbjct: 119 YEATVGGRLDIEPEAFEGK-------YPAQVGFRIVMNCLPLTENTFKSAIYENYKGSKF 171
Query: 1140 RLELSVPETLDLLDL 1184
+ ELS + + LL L
Sbjct: 172 KQELSPHQVMSLLSL 186
>TAIR9_protein||AT2G32910.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Development and cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G61910.3); Has 954 Blast hits to 804 proteins
in 137 species: Archae - 0; Bacteria - 69; Metazoa - 446; Fungi - 64;
Plants - 191; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink).
| chr2:13959685-13961989 FORWARD
Length = 692
Score = 80 bits (196), Expect = 3e-015
Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Frame = +3
Query: 786 PRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIF 965
P +GG IF+CN T + + + G+ + +D V+ I PGL LFLY+Y L+GIF
Sbjct: 314 PGKVKIGGLIFMCNTKTRPDCFRFSVMGVQEKRKDFVKGIKPGLKLFLYDYDLKLLYGIF 373
Query: 966 EASSFGGSNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSF-RPVLHHYDGP-KF 1139
EASS GG ++ A+ FPAQVR V C L E F + ++ +Y+ KF
Sbjct: 374 EASSAGGMKLERNAF-------GGSFPAQVRFKVFSDCIPLAESQFKKAIIENYNNKNKF 426
Query: 1140 RLELSVPETLDLLDLCEQAGSAA 1208
+ EL+ + L L A A
Sbjct: 427 KTELTHKQVFKLKKLFRPAAIPA 449
>TAIR9_protein||AT2G35140.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Development and
cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G11000.2); Has 160 Blast hits to 150 proteins
in 17 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants
- 154; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
chr2:14813990-14816808 FORWARD
Length = 880
Score = 79 bits (194), Expect = 6e-015
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Frame = +3
Query: 807 GYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSFGG 986
G IF+ NN T +E L R+LFGLP V+ + G+ LFL+ + +LHG+F+A S G
Sbjct: 23 GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82
Query: 987 SNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVLH--HYDGPKFRLELSVP 1160
NI+P A+ +FPAQV+ + C+ L E F +H ++ KF LS
Sbjct: 83 INIEPNAFR----SSGKQFPAQVKFTEKWRCRPLCESEFGNAIHENYFTPTKFNFGLSKA 138
Query: 1161 ETLDLLDL 1184
+ LL L
Sbjct: 139 QVQRLLKL 146
>TAIR9_protein||AT2G35140.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Development and
cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G11000.2); Has 159 Blast hits to 149 proteins
in 17 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants
- 153; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
chr2:14813990-14816808 FORWARD
Length = 880
Score = 79 bits (194), Expect = 6e-015
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Frame = +3
Query: 807 GYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSFGG 986
G IF+ NN T +E L R+LFGLP V+ + G+ LFL+ + +LHG+F+A S G
Sbjct: 23 GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82
Query: 987 SNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVLH--HYDGPKFRLELSVP 1160
NI+P A+ +FPAQV+ + C+ L E F +H ++ KF LS
Sbjct: 83 INIEPNAFR----SSGKQFPAQVKFTEKWRCRPLCESEFGNAIHENYFTPTKFNFGLSKA 138
Query: 1161 ETLDLLDL 1184
+ LL L
Sbjct: 139 QVQRLLKL 146
>TAIR9_protein||AT2G35140.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Development and
cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G11000.2). | chr2:14813990-14816808 FORWARD
Length = 880
Score = 79 bits (194), Expect = 6e-015
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Frame = +3
Query: 807 GYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSFGG 986
G IF+ NN T +E L R+LFGLP V+ + G+ LFL+ + +LHG+F+A S G
Sbjct: 23 GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82
Query: 987 SNIDPTAWEDKKCKGESRFPAQVRICVRKICKALEEDSFRPVLH--HYDGPKFRLELSVP 1160
NI+P A+ +FPAQV+ + C+ L E F +H ++ KF LS
Sbjct: 83 INIEPNAFR----SSGKQFPAQVKFTEKWRCRPLCESEFGNAIHENYFTPTKFNFGLSKA 138
Query: 1161 ETLDLLDL 1184
+ LL L
Sbjct: 139 QVQRLLKL 146
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,327,064,416
Number of Sequences: 33410
Number of Extensions: 1327064416
Number of Successful Extensions: 76223347
Number of sequences better than 0.0: 0
|