BLASTX 7.6.2
Query= RU05270 /QuerySize=1017
(1016 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S... 192 4e-049
TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S... 191 6e-049
>TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S8 (RPS8B) |
chr5:23902626-23903670 REVERSE
Length = 211
Score = 192 bits (486), Expect = 4e-049
Identities = 96/122 (78%), Positives = 101/122 (82%)
Frame = +2
Query: 98 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 277
MGISRDS+H YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 278 LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFRQWYLQHYNV 457
LDTGNFSWGSEAVTRKTR+LDV YNASNNELVRTQTLVK AIVQVDAAPF+Q YLQHY V
Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120
Query: 458 EV 463
++
Sbjct: 121 DI 122
Score = 112 bits (280), Expect = 3e-025
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1
Query: 535 KKSNHLTRKIEKRVQVRTLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 714
KKSNH+ RK+E R + R LDSH+EEQF GRLLACI+SRPGQCGRADGYILEGKELEFYM
Sbjct: 137 KKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEGKELEFYM 196
Query: 715 KKLQR 729
KKLQ+
Sbjct: 197 KKLQK 201
>TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S8 (RPS8A) |
chr5:6851695-6853012 REVERSE
Length = 223
Score = 191 bits (485), Expect = 6e-049
Identities = 94/122 (77%), Positives = 101/122 (82%)
Frame = +2
Query: 98 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 277
MGISRDS+H YE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 278 LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFRQWYLQHYNV 457
LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRT+TLVK AIVQVDAAPF+QWYL HY V
Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120
Query: 458 EV 463
E+
Sbjct: 121 EL 122
Score = 113 bits (281), Expect = 3e-025
Identities = 53/65 (81%), Positives = 58/65 (89%)
Frame = +1
Query: 535 KKSNHLTRKIEKRVQVRTLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 714
KKSNHL RKI R + R+LDSHIE+QF GRLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 151 KKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKELEFYM 210
Query: 715 KKLQR 729
KK+Q+
Sbjct: 211 KKIQK 215
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,327,064,416
Number of Sequences: 33410
Number of Extensions: 1327064416
Number of Successful Extensions: 76223347
Number of sequences better than 0.0: 0
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