BLASTX 7.6.2
Query= RU05312 /QuerySize=574
(573 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G17609.2 | Symbols: HYH | HYH (HY5-HOMOLOG); D... 68 4e-012
TAIR9_protein||AT3G17609.1 | Symbols: HYH | HYH (HY5-HOMOLOG); D... 60 6e-010
TAIR9_protein||AT3G17609.3 | Symbols: HYH | HYH (HY5-HOMOLOG); D... 60 6e-010
TAIR9_protein||AT3G17609.4 | Symbols: HYH | HYH (HY5-HOMOLOG); D... 60 6e-010
TAIR9_protein||AT5G11260.1 | Symbols: HY5, TED 5 | HY5 (ELONGATE... 50 1e-006
>TAIR9_protein||AT3G17609.2 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding /
transcription factor | chr3:6023971-6024585 FORWARD
Length = 150
Score = 68 bits (164), Expect = 4e-012
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +3
Query: 345 EDSDEDMFTVPDVEAIPPDDNPIXXXXXXXXXXXXXXXPGEIGLS-GKRRRGRNPVDKEY 521
E+SDE++ VPD+EA + + G+S KRRRGRNPVDKEY
Sbjct: 22 EESDEELLMVPDMEA--AGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEY 79
Query: 522 RRLKRLLRNRVSAQQAR 572
R LKRLLRNRVSAQQAR
Sbjct: 80 RSLKRLLRNRVSAQQAR 96
>TAIR9_protein||AT3G17609.1 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding /
transcription factor | chr3:6023971-6024585 FORWARD
Length = 136
Score = 60 bits (145), Expect = 6e-010
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3
Query: 477 SGKRRRGRNPVDKEYRRLKRLLRNRVSAQQAR 572
+ KRRRGRNPVDKEYR LKRLLRNRVSAQQAR
Sbjct: 51 TAKRRRGRNPVDKEYRSLKRLLRNRVSAQQAR 82
>TAIR9_protein||AT3G17609.3 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding /
transcription factor | chr3:6024131-6024585 FORWARD
Length = 121
Score = 60 bits (145), Expect = 6e-010
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3
Query: 477 SGKRRRGRNPVDKEYRRLKRLLRNRVSAQQAR 572
+ KRRRGRNPVDKEYR LKRLLRNRVSAQQAR
Sbjct: 36 TAKRRRGRNPVDKEYRSLKRLLRNRVSAQQAR 67
>TAIR9_protein||AT3G17609.4 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding /
transcription factor | chr3:6023971-6024585 FORWARD
Length = 135
Score = 60 bits (145), Expect = 6e-010
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3
Query: 477 SGKRRRGRNPVDKEYRRLKRLLRNRVSAQQAR 572
+ KRRRGRNPVDKEYR LKRLLRNRVSAQQAR
Sbjct: 50 TAKRRRGRNPVDKEYRSLKRLLRNRVSAQQAR 81
>TAIR9_protein||AT5G11260.1 | Symbols: HY5, TED 5 | HY5 (ELONGATED HYPOCOTYL 5);
DNA binding / double-stranded DNA binding / transcription factor |
chr5:3593583-3594800 REVERSE
Length = 169
Score = 50 bits (117), Expect = 1e-006
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 483 KRRRGRNPVDKEYRRLKRLLRNRVSAQQAR 572
+R+RGR P +KE +RLKRLLRNRVSAQQAR
Sbjct: 77 QRKRGRTPAEKENKRLKRLLRNRVSAQQAR 106
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,327,064,416
Number of Sequences: 33410
Number of Extensions: 1327064416
Number of Successful Extensions: 76223347
Number of sequences better than 0.0: 0
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