BLASTX 7.6.2
Query= RU05313 /QuerySize=548
(547 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12120.1 | Symbols: FAD2 | FAD2 (FATTY ACID DE... 213 9e-056
TAIR9_protein||AT3G12120.2 | Symbols: FAD2 | FAD2 (FATTY ACID DE... 213 9e-056
TAIR9_protein||AT2G29980.1 | Symbols: FAD3 | FAD3 (FATTY ACID DE... 97 7e-021
TAIR9_protein||AT2G29980.2 | Symbols: FAD3 | FAD3 (FATTY ACID DE... 97 7e-021
TAIR9_protein||AT3G11170.1 | Symbols: FAD7, FADD | FAD7 (FATTY A... 87 6e-018
TAIR9_protein||AT5G05580.1 | Symbols: FAD8 | FAD8 (FATTY ACID DE... 50 6e-007
>TAIR9_protein||AT3G12120.1 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2);
delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase |
chr3:3860592-3861743 REVERSE
Length = 384
Score = 213 bits (540), Expect = 9e-056
Identities = 93/133 (69%), Positives = 110/133 (82%)
Frame = +1
Query: 133 MGAGGRMSAPPTRKNAETDNIKRVPHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDL 312
MGAGGRM P + K +ETD KRVP KPPF++G +KKAIPPHCF+RS+ SFSY++ D+
Sbjct: 1 MGAGGRMPVPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDI 60
Query: 313 AIASIFYYIASNYINHLSTPLSFLAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDD 492
IAS FYY+A+NY + L PLS+LAWP+YWA QGCVLTG+WVIAHECGHHAFSDYQWLDD
Sbjct: 61 IIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDD 120
Query: 493 TVGLVLHSCLLFP 531
TVGL+ HS LL P
Sbjct: 121 TVGLIFHSFLLVP 133
>TAIR9_protein||AT3G12120.2 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2);
delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase |
chr3:3860592-3861743 REVERSE
Length = 384
Score = 213 bits (540), Expect = 9e-056
Identities = 93/133 (69%), Positives = 110/133 (82%)
Frame = +1
Query: 133 MGAGGRMSAPPTRKNAETDNIKRVPHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDL 312
MGAGGRM P + K +ETD KRVP KPPF++G +KKAIPPHCF+RS+ SFSY++ D+
Sbjct: 1 MGAGGRMPVPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDI 60
Query: 313 AIASIFYYIASNYINHLSTPLSFLAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDD 492
IAS FYY+A+NY + L PLS+LAWP+YWA QGCVLTG+WVIAHECGHHAFSDYQWLDD
Sbjct: 61 IIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDD 120
Query: 493 TVGLVLHSCLLFP 531
TVGL+ HS LL P
Sbjct: 121 TVGLIFHSFLLVP 133
>TAIR9_protein||AT2G29980.1 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3);
omega-3 fatty acid desaturase | chr2:12781787-12784946 REVERSE
Length = 387
Score = 97 bits (239), Expect = 7e-021
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Frame = +1
Query: 205 PHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDLAIASIFYYIASNYINHLSTPLSFL 384
P +PPF +G ++ AIP HC+ +S + S SYVV D+ IA IA+ Y++ S+
Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDI-IAVAALAIAAVYVD------SWF 80
Query: 385 AWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSCLLFP 531
WP+YWA QG + ++V+ H+CGH +FSD L+ VG +LHS +L P
Sbjct: 81 LWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVP 129
>TAIR9_protein||AT2G29980.2 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3);
omega-3 fatty acid desaturase | chr2:12782257-12784946 REVERSE
Length = 289
Score = 97 bits (239), Expect = 7e-021
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Frame = +1
Query: 205 PHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDLAIASIFYYIASNYINHLSTPLSFL 384
P +PPF +G ++ AIP HC+ +S + S SYVV D+ IA IA+ Y++ S+
Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDI-IAVAALAIAAVYVD------SWF 80
Query: 385 AWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSCLLFP 531
WP+YWA QG + ++V+ H+CGH +FSD L+ VG +LHS +L P
Sbjct: 81 LWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVP 129
>TAIR9_protein||AT3G11170.1 | Symbols: FAD7, FADD | FAD7 (FATTY ACID DESATURASE
7); omega-3 fatty acid desaturase | chr3:3499959-3502126 FORWARD
Length = 447
Score = 87 bits (214), Expect = 6e-018
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Frame = +1
Query: 181 ETDNIKRV-PHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDLAIASIFYYIA-SNYI 354
E DN +R P PPF L ++ AIP HC+ ++ S SYVV D+AI +F A + Y+
Sbjct: 81 EEDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAI--VFALAAGAAYL 138
Query: 355 NHLSTPLSFLAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSCLLFP 531
N +++ WP+YW QG + ++V+ H+CGH +FS+ L+ VG +LHS +L P
Sbjct: 139 N------NWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVP 191
>TAIR9_protein||AT5G05580.1 | Symbols: FAD8 | FAD8 (FATTY ACID DESATURASE 8);
omega-3 fatty acid desaturase | chr5:1664331-1666345 FORWARD
Length = 436
Score = 50 bits (119), Expect = 6e-007
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 178 AETDNIKRVPHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDLAIASIFYYIASNYIN 357
+E D + P PPF L ++ AIP HC+ ++ S SYVV D+AI +A+ + N
Sbjct: 74 SEEDTERFDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNN 133
Query: 358 HLSTPLSFLA-WPIYWAL 408
L PL + A ++WAL
Sbjct: 134 WLLWPLYWFAQGTMFWAL 151
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,327,064,416
Number of Sequences: 33410
Number of Extensions: 1327064416
Number of Successful Extensions: 76223347
Number of sequences better than 0.0: 0
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