BLASTX 7.6.2
Query= RU05328 /QuerySize=740
(739 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G26840.1 | Symbols: SUM1, SUMO 1, SUMO1, ATSUM... 176 2e-044
TAIR9_protein||AT5G55160.1 | Symbols: SUM2, SUMO 2, SUMO2, ATSUM... 174 8e-044
TAIR9_protein||AT5G55160.2 | Symbols: SUM2, SUMO 2, SUMO2, ATSUM... 139 2e-033
TAIR9_protein||AT5G55170.1 | Symbols: SUM3, SUMO 3, SUMO3, ATSUM... 102 3e-022
TAIR9_protein||AT5G55856.1 | Symbols: | FUNCTIONS IN: molecular... 95 4e-020
TAIR9_protein||AT5G48710.1 | Symbols: | ubiquitin-related | chr... 81 5e-016
TAIR9_protein||AT2G32765.1 | Symbols: SUM5, SUMO5, ATSUMO5 | SUM... 72 2e-013
TAIR9_protein||AT5G48700.1 | Symbols: | ubiquitin-related | chr... 72 2e-013
TAIR9_protein||AT5G55855.1 | Symbols: | unknown protein | chr5:... 48 5e-006
>TAIR9_protein||AT4G26840.1 | Symbols: SUM1, SUMO 1, SUMO1, ATSUMO1 | SUMO1
(SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag |
chr4:13497466-13498458 FORWARD
Length = 101
Score = 176 bits (444), Expect = 2e-044
Identities = 85/93 (91%), Positives = 89/93 (95%)
Frame = +1
Query: 106 SQPQEEDKKPNDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFL 285
S QEEDKKP D GAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++NSIAFL
Sbjct: 2 SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61
Query: 286 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGA 384
FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGG+
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94
>TAIR9_protein||AT5G55160.1 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2
(SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag |
chr5:22383747-22384772 REVERSE
Length = 104
Score = 174 bits (439), Expect = 8e-044
Identities = 87/95 (91%), Positives = 89/95 (93%), Gaps = 1/95 (1%)
Frame = +1
Query: 106 SQPQEEDKKPNDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFL 285
S EEDKKP DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+ NSIAFL
Sbjct: 2 SATPEEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 60
Query: 286 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGAAQ 390
FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG A+
Sbjct: 61 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGAK 95
>TAIR9_protein||AT5G55160.2 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2
(SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag |
chr5:22383747-22384772 REVERSE
Length = 117
Score = 139 bits (349), Expect = 2e-033
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +1
Query: 178 DGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELEMEDGDEID 357
DGNEVFFRIKRSTQLKKLMNAYCDRQSV+ NSIAFLFDGRRLRAEQTPDELEMEDGDEID
Sbjct: 38 DGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEID 97
Query: 358 AMLHQTGGAAQ 390
AMLHQTGG A+
Sbjct: 98 AMLHQTGGGAK 108
>TAIR9_protein||AT5G55170.1 | Symbols: SUM3, SUMO 3, SUMO3, ATSUMO3 | SUMO3
(SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag |
chr5:22385468-22386071 REVERSE
Length = 112
Score = 102 bits (253), Expect = 3e-022
Identities = 48/92 (52%), Positives = 66/92 (71%)
Frame = +1
Query: 106 SQPQEEDKKPNDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFL 285
S PQ++ +Q AH+ LKVK QDG+EV F+ K+S LKKLM YCDR+ ++L++ AF+
Sbjct: 2 SNPQDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFI 61
Query: 286 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 381
F+G R+ +TPDEL+MEDGD IDA +GG
Sbjct: 62 FNGARIGGLETPDELDMEDGDVIDACRAMSGG 93
>TAIR9_protein||AT5G55856.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: protein modification process; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin
(InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: SUMO1
(SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag
(TAIR:AT4G26840.1); Has 781 Blast hits to 780 proteins in 173 species:
Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 93; Plants - 124;
Viruses - 1; Other Eukaryotes - 86 (source: NCBI BLink). |
chr5:22607927-22608640 FORWARD
Length = 98
Score = 95 bits (235), Expect = 4e-020
Identities = 45/86 (52%), Positives = 62/86 (72%)
Frame = +1
Query: 124 DKKPNDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRL 303
DKKP +HI +KVK QD V+FRIKR +L+K+M+AY D+ VE++++ FLFDG R+
Sbjct: 5 DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64
Query: 304 RAEQTPDELEMEDGDEIDAMLHQTGG 381
+ QTP+EL +ED DEI+A Q GG
Sbjct: 65 KLNQTPNELGLEDEDEIEAFGEQLGG 90
>TAIR9_protein||AT5G48710.1 | Symbols: | ubiquitin-related |
chr5:19755065-19755572 REVERSE
Length = 115
Score = 81 bits (199), Expect = 5e-016
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +1
Query: 121 EDKKPNDQGAHINLKVKGQDGNEV-FFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGR 297
+ +K H+ LKVKGQD + F ++R+ +L K+M Y + +E N+ FLFDG
Sbjct: 17 QKRKVVSDPTHVTLKVKGQDEEDFRVFWVRRNAKLLKMMELYTKMRGIEWNTFRFLFDGS 76
Query: 298 RLRAEQTPDELEMEDGDEIDAMLHQTGG 381
R+R TPDELE +DGDEIDAML Q G
Sbjct: 77 RIREYHTPDELERKDGDEIDAMLCQQSG 104
>TAIR9_protein||AT2G32765.1 | Symbols: SUM5, SUMO5, ATSUMO5 | SUMO5 (SMALL
UBIQUITINRELATED MODIFIER 5); protein tag | chr2:13894968-13895399
FORWARD
Length = 109
Score = 72 bits (176), Expect = 2e-013
Identities = 32/76 (42%), Positives = 52/76 (68%)
Frame = +1
Query: 154 INLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELE 333
+ LKVK Q G E ++I LKKLM+AYC +++++ +S+ F+++GR ++A QTP +L
Sbjct: 28 VTLKVKNQQGAEDLYKIGTHAHLKKLMSAYCTKRNLDYSSVRFVYNGREIKARQTPAQLH 87
Query: 334 MEDGDEIDAMLHQTGG 381
ME+ DEI ++ GG
Sbjct: 88 MEEEDEICMVMELGGG 103
>TAIR9_protein||AT5G48700.1 | Symbols: | ubiquitin-related |
chr5:19749494-19750013 REVERSE
Length = 118
Score = 72 bits (176), Expect = 2e-013
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +1
Query: 118 EEDKKPNDQGAHINLKVKGQDGNEV-FFRIKRSTQLKKLMNAYCDRQSVELNSIAFLF-D 291
E+ K + H+ L VKGQD V FR++R +L KLM Y + +E N+ FL D
Sbjct: 19 EKRKDVESESTHVTLNVKGQDEEGVKVFRVRRKARLLKLMEYYAKMRGIEWNTFRFLSDD 78
Query: 292 GRRLRAEQTPDELEMEDGDEIDAMLHQTGG 381
G R+R T D++E++DGD+IDA+L Q G
Sbjct: 79 GSRIREYHTADDMELKDGDQIDALLPQESG 108
>TAIR9_protein||AT5G55855.1 | Symbols: | unknown protein |
chr5:22606254-22606491 FORWARD
Length = 60
Score = 48 bits (113), Expect = 5e-006
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +1
Query: 229 LMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDE---LEMEDGDEIDAMLHQTGG 381
+M AY D+ ++++ F DG R++ QTP+E L++EDGDEIDA + Q G
Sbjct: 1 MMQAYSDKVGQQMSAFRFHCDGIRIKPNQTPNEELQLDLEDGDEIDAFVDQIAG 54
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,327,064,416
Number of Sequences: 33410
Number of Extensions: 1327064416
Number of Successful Extensions: 76223347
Number of sequences better than 0.0: 0
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