BLASTX 7.6.2
Query= RU05336 /QuerySize=1565
(1564 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12120.1 | Symbols: FAD2 | FAD2 (FATTY ACID DE... 654 7e-188
TAIR9_protein||AT3G12120.2 | Symbols: FAD2 | FAD2 (FATTY ACID DE... 654 7e-188
TAIR9_protein||AT2G29980.1 | Symbols: FAD3 | FAD3 (FATTY ACID DE... 236 5e-062
TAIR9_protein||AT3G11170.1 | Symbols: FAD7, FADD | FAD7 (FATTY A... 223 2e-058
TAIR9_protein||AT5G05580.1 | Symbols: FAD8 | FAD8 (FATTY ACID DE... 219 4e-057
TAIR9_protein||AT2G29980.2 | Symbols: FAD3 | FAD3 (FATTY ACID DE... 159 5e-039
>TAIR9_protein||AT3G12120.1 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2);
delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase |
chr3:3860592-3861743 REVERSE
Length = 384
Score = 654 bits (1685), Expect = 7e-188
Identities = 299/379 (78%), Positives = 332/379 (87%), Gaps = 1/379 (0%)
Frame = +2
Query: 95 MGAGGRMSAPPTRKSAETDNIKRVPHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDL 274
MGAGGRM P + K +ETD KRVP KPPF++G +KKAIPPHCF+RS+ SFSY++ D+
Sbjct: 1 MGAGGRMPVPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDI 60
Query: 275 AIASIFYYIASNYINHLSTPLSFLAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDD 454
IAS FYY+A+NY + L PLS+LAWP+YWA QGCVLTG+WVIAHECGHHAFSDYQWLDD
Sbjct: 61 IIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDD 120
Query: 455 TVGLVLHSCLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMGWYSKYLNNPPGRXX 634
TVGL+ HS LLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSA+ WY KYLNNP GR
Sbjct: 121 TVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIM 180
Query: 635 XXXXXXXXGWPLYLAFNVSGRPYDGFACHYHPYGPIYSDRERLQIYISAAGVLAVCYGLY 814
GWPLYLAFNVSGRPYDGFACH+ P PIY+DRERLQIY+S AG+LAVC+GLY
Sbjct: 181 MLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLY 240
Query: 815 RLAVAKGLAWVLCFYGGPLLVVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 994
R A A+G+A ++C YG PLL+VNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD
Sbjct: 241 RYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 300
Query: 995 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAK 1174
YGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILG+YYQFDGTP+Y AM+REAK
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAK 360
Query: 1175 ECIYVEPD-EVDKKGVFWY 1228
ECIYVEPD E DKKGV+WY
Sbjct: 361 ECIYVEPDREGDKKGVYWY 379
>TAIR9_protein||AT3G12120.2 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2);
delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase |
chr3:3860592-3861743 REVERSE
Length = 384
Score = 654 bits (1685), Expect = 7e-188
Identities = 299/379 (78%), Positives = 332/379 (87%), Gaps = 1/379 (0%)
Frame = +2
Query: 95 MGAGGRMSAPPTRKSAETDNIKRVPHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDL 274
MGAGGRM P + K +ETD KRVP KPPF++G +KKAIPPHCF+RS+ SFSY++ D+
Sbjct: 1 MGAGGRMPVPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDI 60
Query: 275 AIASIFYYIASNYINHLSTPLSFLAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDD 454
IAS FYY+A+NY + L PLS+LAWP+YWA QGCVLTG+WVIAHECGHHAFSDYQWLDD
Sbjct: 61 IIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDD 120
Query: 455 TVGLVLHSCLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMGWYSKYLNNPPGRXX 634
TVGL+ HS LLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSA+ WY KYLNNP GR
Sbjct: 121 TVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIM 180
Query: 635 XXXXXXXXGWPLYLAFNVSGRPYDGFACHYHPYGPIYSDRERLQIYISAAGVLAVCYGLY 814
GWPLYLAFNVSGRPYDGFACH+ P PIY+DRERLQIY+S AG+LAVC+GLY
Sbjct: 181 MLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLY 240
Query: 815 RLAVAKGLAWVLCFYGGPLLVVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 994
R A A+G+A ++C YG PLL+VNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD
Sbjct: 241 RYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 300
Query: 995 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAK 1174
YGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILG+YYQFDGTP+Y AM+REAK
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAK 360
Query: 1175 ECIYVEPD-EVDKKGVFWY 1228
ECIYVEPD E DKKGV+WY
Sbjct: 361 ECIYVEPDREGDKKGVYWY 379
>TAIR9_protein||AT2G29980.1 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3);
omega-3 fatty acid desaturase | chr2:12781787-12784946 REVERSE
Length = 387
Score = 236 bits (600), Expect = 5e-062
Identities = 127/323 (39%), Positives = 177/323 (54%), Gaps = 18/323 (5%)
Frame = +2
Query: 167 PHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDLAIASIFYYIASNYINHLSTPLSFL 346
P +PPF +G ++ AIP HC+ +S + S SYVV D+ IA IA+ Y++ S+
Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDI-IAVAALAIAAVYVD------SWF 80
Query: 347 AWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSCLLVPYFSWKYSHRRH 526
WP+YWA QG + ++V+ H+CGH +FSD L+ VG +LHS +LVPY W+ SHR H
Sbjct: 81 LWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTH 140
Query: 527 HSNTGSLERDEVFVPKQKSAMGWYSKYLNNPPGRXXXXXXXXXXGWPLYLAFNVSGRPYD 706
H N G +E DE +VP + K L + +PLYL + G+
Sbjct: 141 HQNHGHVENDESWVPLPERVY----KKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKE-- 194
Query: 707 GFACHYHPYGPIYSDRERLQIYISAAGVLAVCYGLYRLAVAKGLAWVLCFYGGPLLVVNA 886
H++PY +++ ER I S + L L+ G VL YG P ++
Sbjct: 195 --GSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVM 252
Query: 887 FLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFS 1060
+L +TYL H LP Y EW +LRG L T+DRDYGI N + H+I THV HHLF
Sbjct: 253 WLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDI-GTHVIHHLFP 311
Query: 1061 TMPHYHAMEATKAIKPILGEYYQ 1129
+PHYH ++ATKA K +LG YY+
Sbjct: 312 QIPHYHLVDATKAAKHVLGRYYR 334
>TAIR9_protein||AT3G11170.1 | Symbols: FAD7, FADD | FAD7 (FATTY ACID DESATURASE
7); omega-3 fatty acid desaturase | chr3:3499959-3502126 FORWARD
Length = 447
Score = 223 bits (568), Expect = 2e-058
Identities = 127/333 (38%), Positives = 179/333 (53%), Gaps = 21/333 (6%)
Frame = +2
Query: 143 ETDNIKRV-PHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDLAIASIFYYIA-SNYI 316
E DN +R P PPF L ++ AIP HC+ ++ S SYVV D+AI +F A + Y+
Sbjct: 81 EEDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAI--VFALAAGAAYL 138
Query: 317 NHLSTPLSFLAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSCLLVPY 496
N +++ WP+YW QG + ++V+ H+CGH +FS+ L+ VG +LHS +LVPY
Sbjct: 139 N------NWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPY 192
Query: 497 FSWKYSHRRHHSNTGSLERDEVFVPKQKSAMGWYSKYLNNPPGRXXXXXXXXXXGWPLYL 676
W+ SHR HH N G +E DE + P + L+ P +P YL
Sbjct: 193 HGWRISHRTHHQNHGHVENDESWHPMSEKIY----NTLDKPTRFFRFTLPLVMLAYPFYL 248
Query: 677 AFNVSGRPYDGFACHYHPYGPIYSDRERLQIYISAAGVLAVCYGLYRLAVAKGLAWVLCF 856
G+ HYHP ++ +ER + S A A+ L L G +L
Sbjct: 249 WARSPGKK----GSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKL 304
Query: 857 YGGPLLVVNAFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNIT 1030
YG P + +L +TYL H LP Y EW +LRG L T+DRDYG++N + H+I
Sbjct: 305 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDI- 363
Query: 1031 DTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 1129
THV HHLF +PHYH +EAT+A KP+LG+YY+
Sbjct: 364 GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 396
>TAIR9_protein||AT5G05580.1 | Symbols: FAD8 | FAD8 (FATTY ACID DESATURASE 8);
omega-3 fatty acid desaturase | chr5:1664331-1666345 FORWARD
Length = 436
Score = 219 bits (557), Expect = 4e-057
Identities = 123/332 (37%), Positives = 173/332 (52%), Gaps = 18/332 (5%)
Frame = +2
Query: 140 AETDNIKRVPHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDLAIASIFYYIASNYIN 319
+E D + P PPF L ++ AIP HC+ ++ S SYVV D+AI +A+ + N
Sbjct: 74 SEEDTERFDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNN 133
Query: 320 HLSTPLSFLAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSCLLVPYF 499
+L WP+YW QG + ++V+ H+CGH +FS+ L+ G +LHS +LVPY
Sbjct: 134 -------WLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYH 186
Query: 500 SWKYSHRRHHSNTGSLERDEVFVPKQKSAMGWYSKYLNNPPGRXXXXXXXXXXGWPLYLA 679
W+ SHR HH N G +E DE + P +S K L +P YL
Sbjct: 187 GWRISHRTHHQNHGHVENDESWHPLPESIY----KNLEKTTQMFRFTLPFPMLAYPFYLW 242
Query: 680 FNVSGRPYDGFACHYHPYGPIYSDRERLQIYISAAGVLAVCYGLYRLAVAKGLAWVLCFY 859
G+ HYHP ++ +E+ + S A A+ L L G +L Y
Sbjct: 243 NRSPGKQ----GSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLY 298
Query: 860 GGPLLVVNAFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITD 1033
G P + +L +TYL H LP Y EW +LRG L T+DRDYG +N + H+I
Sbjct: 299 GIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI-G 357
Query: 1034 THVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 1129
THV HHLF +PHYH +EAT+A KP+LG+YY+
Sbjct: 358 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 389
>TAIR9_protein||AT2G29980.2 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3);
omega-3 fatty acid desaturase | chr2:12782257-12784946 REVERSE
Length = 289
Score = 159 bits (401), Expect = 5e-039
Identities = 92/268 (34%), Positives = 134/268 (50%), Gaps = 21/268 (7%)
Frame = +2
Query: 167 PHLKPPFTLGQVKKAIPPHCFQRSVIHSFSYVVYDLAIASIFYYIASNYINHLSTPLSFL 346
P +PPF +G ++ AIP HC+ +S + S SYVV D+ IA IA+ Y++ S+
Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDI-IAVAALAIAAVYVD------SWF 80
Query: 347 AWPIYWALQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSCLLVPYFSWKYSHRRH 526
WP+YWA QG + ++V+ H+CGH +FSD L+ VG +LHS +LVPY W+ SHR H
Sbjct: 81 LWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTH 140
Query: 527 HSNTGSLERDEVFVPKQKSAMGWYSKYLNNPPGRXXXXXXXXXXGWPLYLAFNVSGRPYD 706
H N G +E DE +VP + K L + +PLYL + G+
Sbjct: 141 HQNHGHVENDESWVPLPERVY----KKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKE-- 194
Query: 707 GFACHYHPYGPIYSDRERLQIYISAAGVLAVCYGLYRLAVAKGLAWVLCFYGGPLLVVNA 886
H++PY +++ ER I S + L L+ G VL YG P ++
Sbjct: 195 --GSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVM 252
Query: 887 FLVLITYLQHTHPSLPHYDSSEWDWLRG 970
+L +TYL H H + W RG
Sbjct: 253 WLDAVTYLHH------HGHDEKLPWYRG 274
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,327,064,416
Number of Sequences: 33410
Number of Extensions: 1327064416
Number of Successful Extensions: 76223347
Number of sequences better than 0.0: 0
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