BLASTX 7.6.2
Query= RU05365 /QuerySize=926
(925 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G15630.1 | Symbols: | integral membrane famil... 100 2e-021
TAIR9_protein||AT4G15620.1 | Symbols: | integral membrane famil... 95 6e-020
TAIR9_protein||AT4G20390.1 | Symbols: | integral membrane famil... 55 7e-008
>TAIR9_protein||AT4G15630.1 | Symbols: | integral membrane family protein |
chr4:8917527-8918683 FORWARD
Length = 191
Score = 100 bits (247), Expect = 2e-021
Identities = 50/125 (40%), Positives = 64/125 (51%)
Frame = +2
Query: 224 GLNKQTKVAPIKVVPTLPAIYIPLTAKWQDLSAFAYLLVANVIACVYAAFSLVLSFANRG 403
G+ KQTKV PIK++PTLP + + TAK LSAF Y + AN IAC Y A S+V+ ++G
Sbjct: 47 GVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISANAIACGYTAISIVIVMISKG 106
Query: 404 TKKSSXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXYHGNSHVQWNKVCNVFDRFCHQVIA 583
+ S S HGN HV W KVC VF +FC+Q
Sbjct: 107 KRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAV 166
Query: 584 SVVLT 598
SV +T
Sbjct: 167 SVAIT 171
>TAIR9_protein||AT4G15620.1 | Symbols: | integral membrane family protein |
chr4:8913935-8915531 FORWARD
Length = 191
Score = 95 bits (234), Expect = 6e-020
Identities = 58/170 (34%), Positives = 73/170 (42%), Gaps = 3/170 (1%)
Frame = +2
Query: 89 GKSNTDGGGMPEKEVRVANQRRVGSCESXXXXXXXXXXXXXXXXQGLNKQTKVAPIKVVP 268
GK+N +G M EK R R+ E G+ KQTKV IK++P
Sbjct: 5 GKNNMNGMEM-EKGKRELGSRK--GVELTMRVLALILTMAAATVLGVAKQTKVVSIKLIP 61
Query: 269 TLPAIYIPLTAKWQDLSAFAYLLVANVIACVYAAFSLVLSFANRGTKKSSXXXXXXXXXX 448
TLP + I TAK LSAF Y + N IAC Y A S+ + +RG +
Sbjct: 62 TLPPLDITTTAKASYLSAFVYNISVNAIACGYTAISIAILMISRGRRSKKLLMVVLLGDL 121
Query: 449 XXXXXXXSXXXXXXXXXXXXYHGNSHVQWNKVCNVFDRFCHQVIASVVLT 598
S HGN HV W KVC VF +FCH+ S+ LT
Sbjct: 122 VMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLT 171
>TAIR9_protein||AT4G20390.1 | Symbols: | integral membrane family protein |
chr4:11007068-11007869 FORWARD
Length = 198
Score = 55 bits (130), Expect = 7e-008
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +2
Query: 227 LNKQTKVAPIKVVPTLPAIYIPLTAKWQDLSAFAYLLVANVIACVYAAFSLVLS-FANRG 403
LNK+TK + + T+P I LTAK+Q AF + ++ANV+ + +V+ F+ +
Sbjct: 39 LNKETKTLVVATIGTVP-IKATLTAKFQHTPAFVFFVIANVMVSFHNLLMIVVQIFSRKL 97
Query: 404 TKKSSXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXYHGNSHVQWNKVCNVFDRFCHQVIA 583
K + +GN H +WNKVC+ F +C
Sbjct: 98 EYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAKWNKVCDRFTTYCDHGAG 157
Query: 584 SVV 592
+++
Sbjct: 158 AII 160
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,327,064,416
Number of Sequences: 33410
Number of Extensions: 1327064416
Number of Successful Extensions: 76223347
Number of sequences better than 0.0: 0
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