BLASTX 7.6.2
Query= RU05458 /QuerySize=1600
(1599 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G32130.1 | Symbols: | FUNCTIONS IN: molecular... 506 2e-143
TAIR9_protein||AT4G19000.1 | Symbols: | IWS1 C-terminus family ... 244 1e-064
>TAIR9_protein||AT1G32130.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TFIIS
N-terminal (InterPro:IPR017923), IWS1, C-terminal (InterPro:IPR008654);
BEST Arabidopsis thaliana protein match is: IWS1 C-terminus family
protein (TAIR:AT4G19000.1); Has 907 Blast hits to 871 proteins in 182
species: Archae - 4; Bacteria - 14; Metazoa - 417; Fungi - 195; Plants
- 42; Viruses - 8; Other Eukaryotes - 227 (source: NCBI BLink). |
chr1:11559146-11561786 REVERSE
Length = 503
Score = 506 bits (1301), Expect = 2e-143
Identities = 279/465 (60%), Positives = 326/465 (70%), Gaps = 23/465 (4%)
Frame = -1
Query: 1581 DWRDRERSQTPVYDPDASSKSRPRKRLVKKGGGGESQKVVVLREGEEWPDDKFHELMPD- 1405
DW D E SQTPVYD D +K PRKRLVKK V E+ D +F E M
Sbjct: 46 DW-DGEGSQTPVYDNDKVAK--PRKRLVKKSSSERVTIDVPELIDEDVDDAEFDEFMGGR 102
Query: 1404 -------SDEEEQSXXXXXXXXXXXXXXXXXXXLPGKSSSDKAEVKEMWDTLTRGDSEDD 1246
D+ + P + E+ EMW ++ + E+D
Sbjct: 103 GGGSTDYDDKVGRKRKKEKERSSSGSGKEKRHKFPNRGERKSEEIDEMWKSIAH-NPEND 161
Query: 1245 NEGQRNVDDDNFIDDTGVHPSDRYASD-NDRSPSHHPQAEEGE-ENEIDELFXXXXXXXX 1072
EG R +DDDNFIDDTG+ PS+RY D DRSP+H+PQAEEGE E+E++ LF
Sbjct: 162 EEGVRTMDDDNFIDDTGLDPSERYGGDAGDRSPTHYPQAEEGEDEDEVNNLFKMGKKKKK 221
Query: 1071 XXXSPAEIAMVVENIMAELEVTAEEDADLNRQGKPAINKLKKVSLLTEVLSKKQLQQEFL 892
+PAEIA++VEN+MAELEVTAEEDA+LNRQGKPAINKLKK+SLLT+VL KKQLQ EFL
Sbjct: 222 TERNPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLSLLTDVLGKKQLQTEFL 281
Query: 891 DHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTDYPLDLEQYDRREQLKRSGLGKVIMF 712
DHGVLTLLKNWLEPLPDGSLPNINIRAAIL++LTD+P+DL+QYDRREQLK+SGLGKVIMF
Sbjct: 282 DHGVLTLLKNWLEPLPDGSLPNINIRAAILRVLTDFPIDLDQYDRREQLKKSGLGKVIMF 341
Query: 711 LSKSDEETTSNRKLAKELVDKWSRPLFNKSTRFEDMRNIDEERVPFRRPSVKKPASSGSG 532
LSKSDEET SNR+LAK+LVDKWSRP+FNKSTRFEDMRN+DE+RVP+RRP VKKP++ +
Sbjct: 342 LSKSDEETNSNRRLAKDLVDKWSRPIFNKSTRFEDMRNLDEDRVPYRRPPVKKPSNKAT- 400
Query: 531 MESRDGDLDLDEFSRERK----SGQSS--SRQLTSRPEATQMDFLVRPQSKIDPDEIRAR 370
MESRDGD DL+ RERK SGQSS RQ+T RPEAT +DFL+RPQSKIDPDEI AR
Sbjct: 401 MESRDGDFDLE--IRERKTGLTSGQSSRGDRQMTMRPEATPLDFLIRPQSKIDPDEIIAR 458
Query: 369 GKQAIQDQRRMKMNXXXXXXXXXXXXXXXXXXXSVEGRGMVKYL* 235
KQ QDQRR+KMN SVEGRGM+KYL*
Sbjct: 459 AKQVSQDQRRVKMNKKLQQLKGTKKKRLQATKVSVEGRGMIKYL* 503
>TAIR9_protein||AT4G19000.1 | Symbols: | IWS1 C-terminus family protein |
chr4:10405503-10407339 FORWARD
Length = 407
Score = 244 bits (622), Expect = 1e-064
Identities = 132/254 (51%), Positives = 171/254 (67%), Gaps = 10/254 (3%)
Frame = -1
Query: 1140 PQAEEGEENEIDELFXXXXXXXXXXXSPAEIAMVVENIMAELEVTAEEDADLNRQGKPAI 961
P+ ++ + EI +LF + EI M VE +MA LE+ E+D NR+GKPAI
Sbjct: 113 PKKKDEDAEEIKKLFSLRKKKSKCDKTSMEIGMQVEQVMANLEIAVEDDVICNREGKPAI 172
Query: 960 NKLKKVSLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTDYP 781
NKL K+ LL E LSKK LQ EFLDHGVL LLKNWLEPLPDGSLPNINIR+A+L IL D+
Sbjct: 173 NKLMKLPLLNETLSKKPLQGEFLDHGVLNLLKNWLEPLPDGSLPNINIRSAVLMILNDFR 232
Query: 780 LDLEQYDRREQLKRSGLGKVIMFLSKSDEETTSNRKLAKELVDKWSRPLFNKSTRFEDM- 604
+DL+Q RREQL +SGLGKVIMFLSKSDEETT NR+LA ++++KW R ++NKSTR+++M
Sbjct: 233 IDLDQDSRREQLIKSGLGKVIMFLSKSDEETTPNRRLANDIINKWGRIIYNKSTRYDNMF 292
Query: 603 --RNIDEER-VPFRRPSVKKPASSGSGMESRDGDLDLDEFSRERKSGQSSSRQLTSRPEA 433
+DE+R + RR + K A SG +RD + D+D + + G + R P
Sbjct: 293 TQEELDEQRQILLRRQT--KTAPKVSGTRARDFNTDIDLY----ELGTWTGRARAKIPTT 346
Query: 432 TQMDFLVRPQSKID 391
MDF +RP SK+D
Sbjct: 347 MSMDFKIRPPSKVD 360
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,388,059,846
Number of Sequences: 33410
Number of Extensions: 1388059846
Number of Successful Extensions: 81198310
Number of sequences better than 0.0: 0
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