BLASTX 7.6.2
Query= RU05573 /QuerySize=470
(469 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G47110.1 | Symbols: UBQ6 | UBQ6; protein bindi... 113 7e-026
TAIR9_protein||AT3G62250.1 | Symbols: UBQ5 | UBQ5 (ubiquitin 5);... 112 9e-026
TAIR9_protein||AT1G23410.1 | Symbols: | ubiquitin extension pro... 102 2e-022
>TAIR9_protein||AT2G47110.1 | Symbols: UBQ6 | UBQ6; protein binding |
chr2:19344701-19345174 FORWARD
Length = 158
Score = 113 bits (281), Expect = 7e-026
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +1
Query: 100 LAVLQFYKVDDSGKVQKLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAG 264
LAVLQFYKVD SGKVQ+LRKECPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct: 100 LAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 154
>TAIR9_protein||AT3G62250.1 | Symbols: UBQ5 | UBQ5 (ubiquitin 5); protein
binding / structural constituent of ribosome | chr3:23037138-23037611
FORWARD
Length = 158
Score = 112 bits (280), Expect = 9e-026
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1
Query: 100 LAVLQFYKVDDSGKVQKLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAG 264
LAVLQFYK+D SGKVQ+LRKECPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct: 100 LAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 154
>TAIR9_protein||AT1G23410.1 | Symbols: | ubiquitin extension protein, putative
/ 40S ribosomal protein S27A (RPS27aA) | chr1:8314940-8315410 FORWARD
Length = 157
Score = 102 bits (252), Expect = 2e-022
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = +1
Query: 13 LEISGGAXXXXXXXXXXXXXXXXXXXXXXLAVLQFYKVDDSGKVQKLRKECPNAECGAGT 192
L + GGA LAVLQFYKVD SGKVQ+L+KECP+ CG GT
Sbjct: 71 LRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCGPGT 130
Query: 193 FMANHFDRHYCGKCGLTYVYQKA 261
FMA+HFDRHYCGKCG TYV++KA
Sbjct: 131 FMASHFDRHYCGKCGTTYVFKKA 153
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,388,059,846
Number of Sequences: 33410
Number of Extensions: 1388059846
Number of Successful Extensions: 81198310
Number of sequences better than 0.0: 0
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