BLASTX 7.6.2
Query= RU05805 /QuerySize=664
(663 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G49910.1 | Symbols: | 60S ribosomal protein L... 184 4e-047
TAIR9_protein||AT5G67510.1 | Symbols: | 60S ribosomal protein L... 183 1e-046
>TAIR9_protein||AT3G49910.1 | Symbols: | 60S ribosomal protein L26 (RPL26A) |
chr3:18504311-18504751 FORWARD
Length = 147
Score = 184 bits (467), Expect = 4e-047
Identities = 94/147 (63%), Positives = 103/147 (70%)
Frame = +3
Query: 18 MKRNPXXXXXXXXXXXAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 197
MK NP AHFTA SS RRV+MS+PLS+DLR KYNVRSMP+RKDDEVQ+VRG
Sbjct: 1 MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60
Query: 198 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVLITXXXXXXXXXXXXXX 377
TYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI PSKV+IT
Sbjct: 61 TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120
Query: 378 XXXXXXXXXXXXXTKFTAEDIMQNVD* 458
TKFT+ED+MQNVD*
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD* 147
>TAIR9_protein||AT5G67510.1 | Symbols: | 60S ribosomal protein L26 (RPL26B) |
chr5:26937970-26938410 REVERSE
Length = 147
Score = 183 bits (463), Expect = 1e-046
Identities = 93/147 (63%), Positives = 104/147 (70%)
Frame = +3
Query: 18 MKRNPXXXXXXXXXXXAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 197
MK NP AHFTAPSSVRRVLMS+PLS DLR+K+NVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60
Query: 198 TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVLITXXXXXXXXXXXXXX 377
T+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N S V+IT
Sbjct: 61 TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120
Query: 378 XXXXXXXXXXXXXTKFTAEDIMQNVD* 458
TKF+AED+M+NVD*
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD* 147
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,479,988,662
Number of Sequences: 33410
Number of Extensions: 1479988662
Number of Successful Extensions: 86843203
Number of sequences better than 0.0: 0
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