BLASTX 7.6.2
Query= RU05848 /QuerySize=1004
(1003 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G79110.2 | Symbols: | protein binding / zinc ... 175 5e-044
TAIR9_protein||AT3G12920.1 | Symbols: | protein binding / zinc ... 170 1e-042
TAIR9_protein||AT1G79110.1 | Symbols: | protein binding / zinc ... 169 2e-042
TAIR9_protein||AT4G19700.1 | Symbols: RING | RING; protein bindi... 126 3e-029
TAIR9_protein||AT5G45100.1 | Symbols: | protein binding / zinc ... 125 5e-029
TAIR9_protein||AT5G45100.2 | Symbols: | protein binding / zinc ... 125 5e-029
TAIR9_protein||AT1G60610.1 | Symbols: | protein binding / zinc ... 104 9e-023
TAIR9_protein||AT1G60610.2 | Symbols: | protein binding / zinc ... 104 9e-023
TAIR9_protein||AT1G60610.3 | Symbols: | protein binding / zinc ... 104 9e-023
TAIR9_protein||AT2G12290.1 | Symbols: | FUNCTIONS IN: molecular... 67 1e-011
TAIR9_protein||AT1G10650.1 | Symbols: | protein binding / zinc ... 59 3e-009
TAIR9_protein||AT1G10650.2 | Symbols: | protein binding / zinc ... 59 3e-009
TAIR9_protein||AT1G45976.1 | Symbols: SBP1 | SBP1 (s-ribonucleas... 59 6e-009
TAIR9_protein||AT5G47050.1 | Symbols: | protein binding / zinc ... 55 6e-008
TAIR9_protein||AT1G32740.1 | Symbols: | protein binding / zinc ... 53 3e-007
>TAIR9_protein||AT1G79110.2 | Symbols: | protein binding / zinc ion binding |
chr1:29759345-29760586 FORWARD
Length = 356
Score = 175 bits (442), Expect = 5e-044
Identities = 93/199 (46%), Positives = 119/199 (59%), Gaps = 7/199 (3%)
Frame = -3
Query: 836 RFIAQHTEKVXXXXXXXXXXXXXXXVSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKS 657
RF++ H E+V + AI++ +VK+L+ K++E +R+ K+N L+ERVKS
Sbjct: 158 RFVSLHMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKS 217
Query: 656 LFVENQIWRDLAQSNEAAANSLRSNLEQVLAHVSEEGHQMGNFATAAAPEDEAESCCGSN 477
L +ENQIWRDLAQ+NEA AN LR+NLE VLA V + G ED+AESCCGS+
Sbjct: 218 LSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAG-LEKNMNEEDDAESCCGSS 276
Query: 476 DCGNENEAX-----XXXXXXXXXXXXXXXRMCKRCGVRESKVLLLPCRHLCLCTMCGSTL 312
CG E RMC+ CG ES VLLLPCRHLCLC +CGS++
Sbjct: 277 -CGGGGEETVRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSV 335
Query: 311 QNCPVCDSVMNASVHVNFS 255
CP+C S NASVHVN S
Sbjct: 336 HTCPICTSPKNASVHVNMS 354
>TAIR9_protein||AT3G12920.1 | Symbols: | protein binding / zinc ion binding |
chr3:4122127-4123323 REVERSE
Length = 336
Score = 170 bits (430), Expect = 1e-042
Identities = 88/197 (44%), Positives = 116/197 (58%), Gaps = 8/197 (4%)
Frame = -3
Query: 836 RFIAQHTEKVXXXXXXXXXXXXXXXVSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKS 657
R I+ H E++ V A+++ ++K L+ KDDEI + KLN L+E+VKS
Sbjct: 143 RLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHIGKLNLFLEEKVKS 202
Query: 656 LFVENQIWRDLAQSNEAAANSLRSNLEQVLAHVSEEGHQMGNFATAAAPEDEAESCCGSN 477
L VENQIWRD+AQSNEA N+LRSNL+QVLA V + + D+A+SCCGSN
Sbjct: 203 LCVENQIWRDVAQSNEATVNALRSNLQQVLAAV-----ERNRWEEPPTVADDAQSCCGSN 257
Query: 476 DCGNENE---AXXXXXXXXXXXXXXXXRMCKRCGVRESKVLLLPCRHLCLCTMCGSTLQN 306
D G+ E MC+ CG E+ VLLLPCRH+CLC++CGS+L
Sbjct: 258 DEGDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLCSVCGSSLNT 317
Query: 305 CPVCDSVMNASVHVNFS 255
CP+C S AS+HVN S
Sbjct: 318 CPICKSPKTASLHVNLS 334
>TAIR9_protein||AT1G79110.1 | Symbols: | protein binding / zinc ion binding |
chr1:29759345-29760586 FORWARD
Length = 359
Score = 169 bits (428), Expect = 2e-042
Identities = 93/202 (46%), Positives = 119/202 (58%), Gaps = 10/202 (4%)
Frame = -3
Query: 836 RFIAQH---TEKVXXXXXXXXXXXXXXXVSAIQERIVKKLQEKDDEIQRMSKLNWVLQER 666
RF++ H E+V + AI++ +VK+L+ K++E +R+ K+N L+ER
Sbjct: 158 RFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEER 217
Query: 665 VKSLFVENQIWRDLAQSNEAAANSLRSNLEQVLAHVSEEGHQMGNFATAAAPEDEAESCC 486
VKSL +ENQIWRDLAQ+NEA AN LR+NLE VLA V + G ED+AESCC
Sbjct: 218 VKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAG-LEKNMNEEDDAESCC 276
Query: 485 GSNDCGNENEAX-----XXXXXXXXXXXXXXXRMCKRCGVRESKVLLLPCRHLCLCTMCG 321
GS+ CG E RMC+ CG ES VLLLPCRHLCLC +CG
Sbjct: 277 GSS-CGGGGEETVRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCG 335
Query: 320 STLQNCPVCDSVMNASVHVNFS 255
S++ CP+C S NASVHVN S
Sbjct: 336 SSVHTCPICTSPKNASVHVNMS 357
>TAIR9_protein||AT4G19700.1 | Symbols: RING | RING; protein binding / zinc ion
binding | chr4:10713633-10714635 REVERSE
Length = 305
Score = 126 bits (315), Expect = 3e-029
Identities = 71/125 (56%), Positives = 86/125 (68%), Gaps = 9/125 (7%)
Frame = -3
Query: 836 RFIAQHTEKVXXXXXXXXXXXXXXXVSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKS 657
RF+AQ TEK+ SA+Q I KKL+EKDDEI R+ LNWVLQERVKS
Sbjct: 125 RFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVRIRNLNWVLQERVKS 184
Query: 656 LFVENQIWRDLAQSNEAAANSLRSNLEQVLAHVSEEGHQMGNFATAAA-PEDEAESCCGS 480
L+VENQIWRD+AQ+NEA AN+LR+NL+QVLA Q+ F TA+A ED+AES CGS
Sbjct: 185 LYVENQIWRDIAQTNEANANTLRTNLDQVLA-------QLETFPTASAVVEDDAESSCGS 237
Query: 479 NDCGN 465
CG+
Sbjct: 238 -CCGD 241
Score = 85 bits (208), Expect = 7e-017
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
Frame = -3
Query: 398 CKRCGVRESKVLLLPCRHLCLCTMCGST--LQNCPVCDSVMNASVHVNFS 255
CKRCG RE+ VL+LPCRHLCLCT+CG + L+ CPVCD VMNASVHVN S
Sbjct: 254 CKRCGEREASVLVLPCRHLCLCTVCGGSALLRTCPVCDMVMNASVHVNMS 303
>TAIR9_protein||AT5G45100.1 | Symbols: | protein binding / zinc ion binding |
chr5:18218769-18219741 FORWARD
Length = 295
Score = 125 bits (313), Expect = 5e-029
Identities = 76/176 (43%), Positives = 96/176 (54%), Gaps = 6/176 (3%)
Frame = -3
Query: 989 SAPRKRSRDSLMNEFNNFTVPQQKKXXXXXXXXXXXXXXXXXXXXXXXXXXRFIAQHTEK 810
+A KR RDS + + Q+++ RF+AQ TE
Sbjct: 65 TAISKRQRDSTFDS-DALIASQKRRAIAFSPASLIDAELVSQIQQQNSEIDRFVAQQTET 123
Query: 809 VXXXXXXXXXXXXXXXVSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKSLFVENQIWR 630
+ SA+Q I+KKL+ KD+EI RM KLNWVLQERVK+L+VENQIWR
Sbjct: 124 LRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLNWVLQERVKNLYVENQIWR 183
Query: 629 DLAQSNEAAANSLRSNLEQVLAHVSEEGHQMGNFATAAAPE-DEAESCCGSNDCGN 465
DLAQ+NEA AN+LRSNLEQVLA V + + F E D+AES CGS D G+
Sbjct: 184 DLAQTNEATANNLRSNLEQVLAQVDD----LDAFRRPLVEEADDAESSCGSCDGGD 235
Score = 79 bits (193), Expect = 4e-015
Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = -3
Query: 398 CKRCGVRESKVLLLPCRHLCLCTMCGST--LQNCPVCDSVMNASVHVNFS 255
CKRCG + VL+LPCRHLCLCT+CGS+ L+ CPVCD VM ASVHVN S
Sbjct: 244 CKRCGELTASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNMS 293
>TAIR9_protein||AT5G45100.2 | Symbols: | protein binding / zinc ion binding |
chr5:18218938-18219741 FORWARD
Length = 268
Score = 125 bits (313), Expect = 5e-029
Identities = 76/176 (43%), Positives = 96/176 (54%), Gaps = 6/176 (3%)
Frame = -3
Query: 989 SAPRKRSRDSLMNEFNNFTVPQQKKXXXXXXXXXXXXXXXXXXXXXXXXXXRFIAQHTEK 810
+A KR RDS + + Q+++ RF+AQ TE
Sbjct: 38 TAISKRQRDSTFDS-DALIASQKRRAIAFSPASLIDAELVSQIQQQNSEIDRFVAQQTET 96
Query: 809 VXXXXXXXXXXXXXXXVSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKSLFVENQIWR 630
+ SA+Q I+KKL+ KD+EI RM KLNWVLQERVK+L+VENQIWR
Sbjct: 97 LRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLNWVLQERVKNLYVENQIWR 156
Query: 629 DLAQSNEAAANSLRSNLEQVLAHVSEEGHQMGNFATAAAPE-DEAESCCGSNDCGN 465
DLAQ+NEA AN+LRSNLEQVLA V + + F E D+AES CGS D G+
Sbjct: 157 DLAQTNEATANNLRSNLEQVLAQVDD----LDAFRRPLVEEADDAESSCGSCDGGD 208
Score = 79 bits (193), Expect = 4e-015
Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = -3
Query: 398 CKRCGVRESKVLLLPCRHLCLCTMCGST--LQNCPVCDSVMNASVHVNFS 255
CKRCG + VL+LPCRHLCLCT+CGS+ L+ CPVCD VM ASVHVN S
Sbjct: 217 CKRCGELTASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNMS 266
>TAIR9_protein||AT1G60610.1 | Symbols: | protein binding / zinc ion binding |
chr1:22327999-22329186 REVERSE
Length = 341
Score = 104 bits (259), Expect = 9e-023
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Frame = -3
Query: 761 VSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKSLFVENQIWRDLAQSNEAAANSLRSN 582
V+A+++ + KKLQEKD EI+ M+K N L +++K + VE Q W A+ NE+ N+L+ N
Sbjct: 179 VTALEKDVSKKLQEKDHEIESMNKKNRELVDKIKQVAVEAQNWHYKAKYNESVVNALKVN 238
Query: 581 LEQVLAHVSEEGHQMGNFATAAAPEDEAESCCGSNDCGNENEAXXXXXXXXXXXXXXXXR 402
L+QV++H ++ N A D + G D ++EA R
Sbjct: 239 LQQVMSHGND------NNAVGGGVADHHQMKEGFGDSEIDDEAASYNYLNIPGMPSTGMR 292
Query: 401 MCKRCGVRESKVLLLPCRHLCLCTMCGSTLQNCPVCDSVMNASVHVNF 258
CK C V+ VLL+PCRHL LC C CPVC S+ +SV V F
Sbjct: 293 -CKLCNVKNVSVLLVPCRHLSLCKDCDVFTGVCPVCQSLKTSSVQVFF 339
>TAIR9_protein||AT1G60610.2 | Symbols: | protein binding / zinc ion binding |
chr1:22327999-22329186 REVERSE
Length = 341
Score = 104 bits (259), Expect = 9e-023
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Frame = -3
Query: 761 VSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKSLFVENQIWRDLAQSNEAAANSLRSN 582
V+A+++ + KKLQEKD EI+ M+K N L +++K + VE Q W A+ NE+ N+L+ N
Sbjct: 179 VTALEKDVSKKLQEKDHEIESMNKKNRELVDKIKQVAVEAQNWHYKAKYNESVVNALKVN 238
Query: 581 LEQVLAHVSEEGHQMGNFATAAAPEDEAESCCGSNDCGNENEAXXXXXXXXXXXXXXXXR 402
L+QV++H ++ N A D + G D ++EA R
Sbjct: 239 LQQVMSHGND------NNAVGGGVADHHQMKEGFGDSEIDDEAASYNYLNIPGMPSTGMR 292
Query: 401 MCKRCGVRESKVLLLPCRHLCLCTMCGSTLQNCPVCDSVMNASVHVNF 258
CK C V+ VLL+PCRHL LC C CPVC S+ +SV V F
Sbjct: 293 -CKLCNVKNVSVLLVPCRHLSLCKDCDVFTGVCPVCQSLKTSSVQVFF 339
>TAIR9_protein||AT1G60610.3 | Symbols: | protein binding / zinc ion binding |
chr1:22327999-22329186 REVERSE
Length = 341
Score = 104 bits (259), Expect = 9e-023
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Frame = -3
Query: 761 VSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKSLFVENQIWRDLAQSNEAAANSLRSN 582
V+A+++ + KKLQEKD EI+ M+K N L +++K + VE Q W A+ NE+ N+L+ N
Sbjct: 179 VTALEKDVSKKLQEKDHEIESMNKKNRELVDKIKQVAVEAQNWHYKAKYNESVVNALKVN 238
Query: 581 LEQVLAHVSEEGHQMGNFATAAAPEDEAESCCGSNDCGNENEAXXXXXXXXXXXXXXXXR 402
L+QV++H ++ N A D + G D ++EA R
Sbjct: 239 LQQVMSHGND------NNAVGGGVADHHQMKEGFGDSEIDDEAASYNYLNIPGMPSTGMR 292
Query: 401 MCKRCGVRESKVLLLPCRHLCLCTMCGSTLQNCPVCDSVMNASVHVNF 258
CK C V+ VLL+PCRHL LC C CPVC S+ +SV V F
Sbjct: 293 -CKLCNVKNVSVLLVPCRHLSLCKDCDVFTGVCPVCQSLKTSSVQVFF 339
>TAIR9_protein||AT2G12290.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
RING; protein binding / zinc ion binding (TAIR:AT4G19700.1); Has 39
Blast hits to 39 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr2:4924100-4924501 REVERSE
Length = 134
Score = 67 bits (163), Expect = 1e-011
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 7/63 (11%)
Frame = -3
Query: 701 RMSKLNWVLQERVKSLFVENQIWRDLAQSNEAAANSLRSNLEQVLAHVSEEGHQMGNFAT 522
R+ LNWVLQE+VKSL+VE QIWR + Q+N+A N+LR+NL+QVLA Q+ F T
Sbjct: 28 RIRNLNWVLQEKVKSLYVEYQIWRGIDQTNKANPNTLRTNLDQVLA-------QLETFPT 80
Query: 521 AAA 513
A+A
Sbjct: 81 ASA 83
>TAIR9_protein||AT1G10650.1 | Symbols: | protein binding / zinc ion binding |
chr1:3524122-3525318 REVERSE
Length = 340
Score = 59 bits (142), Expect = 3e-009
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = -3
Query: 761 VSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKSLFVENQIWRDLAQSNEAAANSLRSN 582
++ +++ + KKLQEKD EI M+K N L ER+K + +E Q W A+ NE+ N L++N
Sbjct: 180 LTTLEKGVSKKLQEKDHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNESVVNVLKAN 239
Query: 581 LEQVLAH 561
L+Q ++H
Sbjct: 240 LQQAMSH 246
Score = 56 bits (134), Expect = 3e-008
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = -3
Query: 398 CKRCGVRESKVLLLPCRHLCLCTMCGSTLQNCPVCDSVMNASVHVNFS* 252
CK C V+E VL++PCRHL LC C + CPVC S+ ++ V V FS*
Sbjct: 292 CKMCNVKEVSVLIVPCRHLSLCKECDVFTKICPVCKSLKSSCVQVFFS* 340
>TAIR9_protein||AT1G10650.2 | Symbols: | protein binding / zinc ion binding |
chr1:3524122-3525060 REVERSE
Length = 284
Score = 59 bits (142), Expect = 3e-009
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = -3
Query: 761 VSAIQERIVKKLQEKDDEIQRMSKLNWVLQERVKSLFVENQIWRDLAQSNEAAANSLRSN 582
++ +++ + KKLQEKD EI M+K N L ER+K + +E Q W A+ NE+ N L++N
Sbjct: 124 LTTLEKGVSKKLQEKDHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNESVVNVLKAN 183
Query: 581 LEQVLAH 561
L+Q ++H
Sbjct: 184 LQQAMSH 190
Score = 56 bits (134), Expect = 3e-008
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = -3
Query: 398 CKRCGVRESKVLLLPCRHLCLCTMCGSTLQNCPVCDSVMNASVHVNFS* 252
CK C V+E VL++PCRHL LC C + CPVC S+ ++ V V FS*
Sbjct: 236 CKMCNVKEVSVLIVPCRHLSLCKECDVFTKICPVCKSLKSSCVQVFFS* 284
>TAIR9_protein||AT1G45976.1 | Symbols: SBP1 | SBP1 (s-ribonuclease binding
protein 1); protein binding / zinc ion binding | chr1:17199371-17200680
FORWARD
Length = 326
Score = 59 bits (140), Expect = 6e-009
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -3
Query: 512 PEDEAESCCGSNDCGNENEAXXXXXXXXXXXXXXXXRMCKRCGVRESKVLLLPCRHLCLC 333
P D E C D ++ A MC+ CGVRE +LLLPC H+CLC
Sbjct: 244 PRDSIEGC---GDSEVDDTASCFNGRDNSNNNTKTMMMCRFCGVREMCMLLLPCNHMCLC 300
Query: 332 TMCGSTLQNCPVCDS 288
C L +CP+C S
Sbjct: 301 KECERKLSSCPLCQS 315
>TAIR9_protein||AT5G47050.1 | Symbols: | protein binding / zinc ion binding |
chr5:19106612-19107860 FORWARD
Length = 301
Score = 55 bits (131), Expect = 6e-008
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = -3
Query: 398 CKRCGVRESKVLLLPCRHLCLCTMCGSTLQNCPVCDSVMNASVHVNFS* 252
C+ C R + VL LPCRHL +CT C +++ CP+C S N+SV V +S*
Sbjct: 253 CRICRRRSATVLALPCRHLVMCTECDGSVRICPLCLSTKNSSVEVFYS* 301
>TAIR9_protein||AT1G32740.1 | Symbols: | protein binding / zinc ion binding |
chr1:11844883-11846082 FORWARD
Length = 313
Score = 53 bits (125), Expect = 3e-007
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = -3
Query: 398 CKRCGVRESKVLLLPCRHLCLCTMCGSTLQNCPVCDSVMNASVHVNF 258
CK C RE+ V++LPCRHL +C C T CP+C ++ N+SV F
Sbjct: 265 CKACREREATVVVLPCRHLSICPGCDRTALACPLCLTLRNSSVEAIF 311
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,479,988,662
Number of Sequences: 33410
Number of Extensions: 1479988662
Number of Successful Extensions: 86843203
Number of sequences better than 0.0: 0
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