BLASTX 7.6.2
Query= RU05949 /QuerySize=1467
(1466 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 175 9e-044
TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONST... 165 9e-041
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 165 9e-041
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 163 3e-040
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 148 2e-035
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 143 3e-034
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 141 1e-033
TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); tr... 141 1e-033
TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type... 91 2e-018
TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type... 91 2e-018
TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type... 89 6e-018
TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type... 89 6e-018
TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type... 87 3e-017
TAIR9_protein||AT1G68190.1 | Symbols: | zinc finger (B-box type... 74 2e-013
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 65 8e-011
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 64 3e-010
TAIR9_protein||AT1G06040.2 | Symbols: STO | STO (SALT TOLERANCE)... 64 3e-010
TAIR9_protein||AT1G06040.1 | Symbols: STO | STO (SALT TOLERANCE)... 64 3e-010
TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type... 64 3e-010
TAIR9_protein||AT2G31380.1 | Symbols: STH | STH; protein domain ... 63 5e-010
TAIR9_protein||AT2G21320.1 | Symbols: | zinc finger (B-box type... 62 8e-010
TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type... 62 1e-009
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 175 bits (442), Expect = 9e-044
Identities = 83/118 (70%), Positives = 95/118 (80%), Gaps = 2/118 (1%)
Frame = -2
Query: 1369 LTPKPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVT 1190
+ K CD+CKS+ +A++CR D+A+LCL+CDSK+H ANKLASRH RVWMCEVCEQAPA VT
Sbjct: 45 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 104
Query: 1189 CKADAAALCVTCDADIHSANPLARRHERVPVEPFLDSAES--IVKSTSAAGLNDAVSS 1022
CKADAAALCVTCD DIHSANPLARRHERVPV PF DS S VK T+ L+D S
Sbjct: 105 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFS 162
Score = 112 bits (280), Expect = 5e-025
Identities = 69/177 (38%), Positives = 89/177 (50%), Gaps = 18/177 (10%)
Frame = -2
Query: 925 FPEMESLFELDYPN------PIQNSSSGMDSXXXXXXXXXXXXXXXXXXXRENCFDIDFC 764
F + + +LDY N ++ +SSG D ENCF++DF
Sbjct: 220 FSDPDPYLDLDYGNVDPKVESLEQNSSGTDG-----VVPVENRTVRIPTVNENCFEMDFT 274
Query: 763 RNKLSSSFSYPAQXXXXXXXXXXXXXXXXPDGNSLSDISYPFIRNVNHNGVESGVXXXXX 584
++ PDG S++D+SYP+ +G + G
Sbjct: 275 GGSKGFTYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPY-GGPATSGADPG------ 327
Query: 583 XXXXXQLSGVDREARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRTET 413
L+ +REARVMRYREKRKNRKF+KTIRYASRKAYAE RPRIKGRFAKRT+T
Sbjct: 328 TQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDT 384
>TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567621 FORWARD
Length = 221
Score = 165 bits (416), Expect = 9e-041
Identities = 73/107 (68%), Positives = 87/107 (81%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
CD+CKS+ + +FCRAD+A+LC CD KIH ANKLASRH+RVW+CEVCEQAPA VTCKADA
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67
Query: 1174 AALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGLND 1034
AALCVTCD DIHSANPL+RRHERVP+ PF D+ ++S+ D
Sbjct: 68 AALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFVD 114
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 165 bits (416), Expect = 9e-041
Identities = 73/107 (68%), Positives = 87/107 (81%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
CD+CKS+ + +FCRAD+A+LC CD KIH ANKLASRH+RVW+CEVCEQAPA VTCKADA
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67
Query: 1174 AALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGLND 1034
AALCVTCD DIHSANPL+RRHERVP+ PF D+ ++S+ D
Sbjct: 68 AALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFVD 114
Score = 92 bits (227), Expect = 7e-019
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -2
Query: 568 QLSGVDREARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRTET 413
QLS +REARV+RYREKRKNRKF+KTIRYASRKAYAE RPRIKGRFAKRT++
Sbjct: 223 QLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 163 bits (412), Expect = 3e-040
Identities = 77/117 (65%), Positives = 90/117 (76%), Gaps = 7/117 (5%)
Frame = -2
Query: 1396 LQAGWTLPGLTPKPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEV 1217
+ GW G + CD CKS +AVFCR DSA+LC+ CD++IH +RH+RVW+CEV
Sbjct: 11 ISGGW---GAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERVWVCEV 63
Query: 1216 CEQAPAAVTCKADAAALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAA 1046
CEQAPAAVTCKADAAALCV+CDADIHSANPLA RHERVPVE F DSAE+ V SA+
Sbjct: 64 CEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISAS 120
Score = 110 bits (273), Expect = 3e-024
Identities = 63/108 (58%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Frame = -2
Query: 664 SLSDISYPFIRNVN-HNGVESGVXXXXXXXXXXQLSGVDREARVMRYREKRKNRKFQKTI 488
S S I Y + + N +N V Q S +DREARV+RYREKRKNRKF+KTI
Sbjct: 246 STSSIEYGVVPDGNTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTI 305
Query: 487 RYASRKAYAETRPRIKGRFAKRTETETEVMDRIFNSAPGSYIADAQYG 344
RYASRKAYAE+RPRIKGRFAKRTETE D IF S + A AQYG
Sbjct: 306 RYASRKAYAESRPRIKGRFAKRTETEN---DDIFLSHVYASAAHAQYG 350
Score = 62 bits (148), Expect = 1e-009
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAV 1193
C+ C+ +P+AV C+AD+A LC++CD+ IH AN LASRH+RV + + A AV
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAV 114
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 148 bits (371), Expect = 2e-035
Identities = 71/130 (54%), Positives = 92/130 (70%), Gaps = 4/130 (3%)
Frame = -2
Query: 1372 GLTPKPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAV 1193
G + CDTC+S+ V+C ADSAYLC TCD+++H AN++ASRH+RV +C+ CE APAA
Sbjct: 10 GTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAF 69
Query: 1192 TCKADAAALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGLNDAVSSLKN 1013
CKADAA+LC CDA+IHSANPLARRH+RVP+ P SA S S+ A DA + +
Sbjct: 70 LCKADAASLCTACDAEIHSANPLARRHQRVPILPL--SANSC--SSMAPSETDADNDEDD 125
Query: 1012 DDADSLLIPN 983
+ S L+PN
Sbjct: 126 REVASWLLPN 135
Score = 94 bits (231), Expect = 3e-019
Identities = 49/75 (65%), Positives = 60/75 (80%), Gaps = 4/75 (5%)
Frame = -2
Query: 568 QLSGVDREARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRTETETEVMDRI 389
QL+ ++REARV+RYREK+K RKF KTIRYASRKAYAE RPRIKGRFAKR ETE E + I
Sbjct: 272 QLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEA-EEI 330
Query: 388 FNSAPGSYIADAQYG 344
F++ S +++ YG
Sbjct: 331 FST---SLMSETGYG 342
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 143 bits (360), Expect = 3e-034
Identities = 61/95 (64%), Positives = 80/95 (84%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
CDTC+S+ V+CRADSAYLC +CD+++H AN+LASRH+RV +C+ CE+APAA CKADA
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71
Query: 1174 AALCVTCDADIHSANPLARRHERVPVEPFLDSAES 1070
A+LC TCD++IHSANPLARRH+RVP+ P + + S
Sbjct: 72 ASLCTTCDSEIHSANPLARRHQRVPILPISEYSYS 106
Score = 85 bits (208), Expect = 1e-016
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = -2
Query: 565 LSGVDREARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRTETETE 404
LS DREARV+RYREK+K RKF+KTIRYASRKAYAE RPRIKGRFAK+ + + E
Sbjct: 281 LSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEE 334
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 141 bits (354), Expect = 1e-033
Identities = 58/102 (56%), Positives = 83/102 (81%)
Frame = -2
Query: 1360 KPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKA 1181
+PCDTC+S+ V+C ADSAYLC++CD+++H AN++ASRH+RV +CE CE+APAA C+A
Sbjct: 18 RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEA 77
Query: 1180 DAAALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKST 1055
D A+LC CD+++HSANPLARRH+RVP+ P ++ S + +T
Sbjct: 78 DDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTT 119
Score = 88 bits (217), Expect = 1e-017
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 3/63 (4%)
Frame = -2
Query: 568 QLSGVDREARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRTETETEVMDRI 389
QLS +DREARV+RYREKRK RKF+KTIRYASRKAYAE RPR+ GRFAKR E E ++
Sbjct: 300 QLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR---EIEAEEQG 356
Query: 388 FNS 380
FN+
Sbjct: 357 FNT 359
>TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171873-5172697 REVERSE
Length = 275
Score = 141 bits (354), Expect = 1e-033
Identities = 58/102 (56%), Positives = 83/102 (81%)
Frame = -2
Query: 1360 KPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKA 1181
+PCDTC+S+ V+C ADSAYLC++CD+++H AN++ASRH+RV +CE CE+APAA C+A
Sbjct: 18 RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEA 77
Query: 1180 DAAALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKST 1055
D A+LC CD+++HSANPLARRH+RVP+ P ++ S + +T
Sbjct: 78 DDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTT 119
>TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 403
Score = 91 bits (224), Expect = 2e-018
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
C+ C + +FCRAD+A LCL CD +H AN L+ +H R +C+ C + P +V C D
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 1174 AALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGLNDAVSSLKNDDADSL 995
LC CD D+H + + HER VE F S+++ + G+ D K DD D L
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGF-SGCPSVLELAAVWGI-DLKGKKKEDDEDEL 129
>TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 402
Score = 91 bits (224), Expect = 2e-018
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
C+ C + +FCRAD+A LCL CD +H AN L+ +H R +C+ C + P +V C D
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 1174 AALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGLNDAVSSLKNDDADSL 995
LC CD D+H + + HER VE F S+++ + G+ D K DD D L
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGF-SGCPSVLELAAVWGI-DLKGKKKEDDEDEL 129
>TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609036 FORWARD
Length = 238
Score = 89 bits (219), Expect = 6e-018
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
CD C SS + V+C+ADSA LCL CD ++H AN+L ++H R +C+ C ++P+++ C+ +
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETER 72
Query: 1174 AALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGLND 1034
+ LC CD H+A+ + H R P E F S+ + + GL+D
Sbjct: 73 SVLCQNCDWQHHTAS--SSLHSRRPFEGF-TGCPSVPELLAIVGLDD 116
>TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609476 FORWARD
Length = 333
Score = 89 bits (219), Expect = 6e-018
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
CD C SS + V+C+ADSA LCL CD ++H AN+L ++H R +C+ C ++P+++ C+ +
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETER 72
Query: 1174 AALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGLND 1034
+ LC CD H+A+ + H R P E F S+ + + GL+D
Sbjct: 73 SVLCQNCDWQHHTAS--SSLHSRRPFEGF-TGCPSVPELLAIVGLDD 116
>TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:9775768-9777657 REVERSE
Length = 434
Score = 87 bits (213), Expect = 3e-017
Identities = 38/90 (42%), Positives = 52/90 (57%)
Frame = -2
Query: 1357 PCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKAD 1178
PCD C + +FCRAD+A LCL CD ++H AN L+ +H R +C+ C P +V C D
Sbjct: 8 PCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTD 67
Query: 1177 AAALCVTCDADIHSANPLARRHERVPVEPF 1088
LC CD D+H + ++ H R VE F
Sbjct: 68 NLILCQECDWDVHGSCSVSDAHVRSAVEGF 97
>TAIR9_protein||AT1G68190.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25559384-25561004 FORWARD
Length = 357
Score = 74 bits (181), Expect = 2e-013
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
C+ CK+ + V+C AD+A LCLTCD+K+H AN L+ RH R +C+ C+ P V C
Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFDHK 73
Query: 1174 AALCVTCDADIHSANPLARR 1115
LC C+ H R
Sbjct: 74 MFLCHGCNDKFHGGGSSEHR 93
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 65 bits (158), Expect = 8e-011
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -2
Query: 553 DREARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRTETET 407
+REARV+RY+EKR+ R F K IRY RK AE RPRIKGRF KRT T
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSLLT 392
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 64 bits (153), Expect = 3e-010
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 553 DREARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRT 419
+REARV RYR+KRKNR F+K IRY RK A+ RPR+KGRF +R+
Sbjct: 277 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321
>TAIR9_protein||AT1G06040.2 | Symbols: STO | STO (SALT TOLERANCE); DNA binding /
protein binding / transcription factor/ zinc ion binding |
chr1:1828957-1829659 REVERSE
Length = 178
Score = 64 bits (153), Expect = 3e-010
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
CD C+ +P+ V C AD A LC CD +IH ANKLAS+HQR+ + + + P C+ A
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64
Query: 1174 AAL-CV 1160
A + CV
Sbjct: 65 AFIFCV 70
>TAIR9_protein||AT1G06040.1 | Symbols: STO | STO (SALT TOLERANCE); DNA binding /
protein binding / transcription factor/ zinc ion binding |
chr1:1828662-1829659 REVERSE
Length = 249
Score = 64 bits (153), Expect = 3e-010
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
CD C+ +P+ V C AD A LC CD +IH ANKLAS+HQR+ + + + P C+ A
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64
Query: 1174 AAL-CV 1160
A + CV
Sbjct: 65 AFIFCV 70
>TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175811 REVERSE
Length = 320
Score = 64 bits (153), Expect = 3e-010
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 553 DREARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRT 419
+REARV RYR+KRKNR F+K IRY RK A+ RPR+KGRF +R+
Sbjct: 270 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 314
>TAIR9_protein||AT2G31380.1 | Symbols: STH | STH; protein domain specific
binding / transcription factor/ zinc ion binding |
chr2:13382150-13383302 FORWARD
Length = 239
Score = 63 bits (151), Expect = 5e-010
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCKADA 1175
CD C+ +P+ + C AD A LC CD ++H ANKLAS+HQR+++ + + P C A
Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKA 64
Query: 1174 AAL-CV 1160
A + CV
Sbjct: 65 AFIFCV 70
Score = 62 bits (148), Expect = 1e-009
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Frame = -2
Query: 1225 CEVCEQAPAAVTCKADAAALCVTCDADIHSANPLARRHERVPVEPFLDS 1079
C+VCE+APA + C AD AALC CD ++H+AN LA +H+R+ FLDS
Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRL----FLDS 49
>TAIR9_protein||AT2G21320.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:9126502-9127652 FORWARD
Length = 173
Score = 62 bits (149), Expect = 8e-010
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = -2
Query: 1354 CDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVTCK 1184
CD C+S+ + VFC AD A LC +CD K+H NKLASRH RV + + AP+ C+
Sbjct: 5 CDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADP-SNAPSCDICE 60
>TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25709331-25710749 REVERSE
Length = 407
Score = 62 bits (148), Expect = 1e-009
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = -2
Query: 550 REARVMRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRT 419
REARV RYREKR+ R F K IRY RK AE RPR+KGRF KR+
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 400
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,509,392,761
Number of Sequences: 33410
Number of Extensions: 1509392761
Number of Successful Extensions: 86928218
Number of sequences better than 0.0: 0
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