BLASTX 7.6.2
Query= RU05967 /QuerySize=1010
(1009 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G51510.1 | Symbols: Y14 | Y14; RNA binding / p... 210 1e-054
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 51 1e-006
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 51 1e-006
>TAIR9_protein||AT1G51510.1 | Symbols: Y14 | Y14; RNA binding / protein binding
| chr1:19103072-19104753 REVERSE
Length = 203
Score = 210 bits (534), Expect = 1e-054
Identities = 107/176 (60%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Frame = -3
Query: 926 NADVEAVDFEPEDDDLMDEDGAVDAEPSASPRAPLPKLKSAITGASSASLSAPKKTKGRG 747
N + EAVDFEPE+DDLMDE+G SPRA P+LKSAI GA+ S KKTKGRG
Sbjct: 3 NIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGES---AKKTKGRG 59
Query: 746 FREDPNAERNTRLAVSDLDGLNALDGLEPQRSIEGWIILVTGIHEEAQEDDLHATFGEFG 567
FRE+ +++R RL+ D + L + PQRS+EGWIILV+G+HEE QE+D+ FG+FG
Sbjct: 60 FREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFG 119
Query: 566 EIKNLHLNLDRRTGFVKGYALIEYENFAEAQAAISRMDGNSVLTQIVNVDWAFSNG 399
EIKNL+LNLDRR+G+VKGYALIEYE EAQ+AIS M+G +LTQ V+VDWAFS+G
Sbjct: 120 EIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSG 175
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 51 bits (120), Expect = 1e-006
Identities = 25/75 (33%), Positives = 43/75 (57%)
Frame = -3
Query: 635 ILVTGIHEEAQEDDLHATFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFAEAQAAISRM 456
+LV I DDL+ F ++G++ ++ + DRRTG +G+A + Y+ EA A+ R+
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 455 DGNSVLTQIVNVDWA 411
DG V + + V +A
Sbjct: 78 DGRVVDGREITVQFA 92
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 51 bits (120), Expect = 1e-006
Identities = 25/75 (33%), Positives = 43/75 (57%)
Frame = -3
Query: 635 ILVTGIHEEAQEDDLHATFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFAEAQAAISRM 456
+LV I DDL+ F ++G++ ++ + DRRTG +G+A + Y+ EA A+ R+
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 455 DGNSVLTQIVNVDWA 411
DG V + + V +A
Sbjct: 78 DGRVVDGREITVQFA 92
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,509,392,761
Number of Sequences: 33410
Number of Extensions: 1509392761
Number of Successful Extensions: 86928218
Number of sequences better than 0.0: 0
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