BLASTX 7.6.2
Query= RU05995 /QuerySize=717
(716 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G04730.1 | Symbols: IAA16 | IAA16; transcripti... 152 3e-037
TAIR9_protein||AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-... 136 1e-032
TAIR9_protein||AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-... 136 1e-032
TAIR9_protein||AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE... 132 2e-031
TAIR9_protein||AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN ... 118 4e-027
TAIR9_protein||AT2G22670.1 | Symbols: IAA8 | IAA8; transcription... 96 1e-020
TAIR9_protein||AT2G22670.2 | Symbols: IAA8 | IAA8; transcription... 96 1e-020
TAIR9_protein||AT2G22670.3 | Symbols: IAA8 | IAA8; transcription... 96 1e-020
TAIR9_protein||AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOC... 95 4e-020
TAIR9_protein||AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACET... 95 4e-020
TAIR9_protein||AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACET... 95 4e-020
TAIR9_protein||AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-... 59 3e-009
TAIR9_protein||AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACET... 55 5e-008
TAIR9_protein||AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-1... 52 3e-007
TAIR9_protein||AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 |... 52 4e-007
TAIR9_protein||AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT H... 51 6e-007
TAIR9_protein||AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOL... 50 9e-007
TAIR9_protein||AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOC... 50 2e-006
>TAIR9_protein||AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 237
Score = 152 bits (382), Expect = 3e-037
Identities = 91/169 (53%), Positives = 106/169 (62%), Gaps = 20/169 (11%)
Frame = +1
Query: 175 LINFEETELRLGLPGPLKDGDQGVKSGNGKRGFLATVDLKLNFSSVNDDEHRSAGDGQLE 354
+INFE TELRLGLPG G+ K+ NGKRGF TVDLKLN SS D S LE
Sbjct: 1 MINFEATELRLGLPGGNHGGEMAGKN-NGKRGFSETVDLKLNLSSTAMD---SVSKVDLE 56
Query: 355 IKKEKEDXXXXXXXXXXXQVVGWPPVRSFRKNIVTVQK-----------KSTDQDQAEKT 501
KEK QVVGWPPVRSFRKN+++ QK K++ A +
Sbjct: 57 NMKEK-----VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSS 111
Query: 502 GSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIGN 648
S + A+VKVSMDGAPYLRK+DLKLY++YQ+LS AL KMFSSFTIGN
Sbjct: 112 ASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGN 160
>TAIR9_protein||AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID
7); transcription factor | chr3:8194768-8196214 FORWARD
Length = 211
Score = 136 bits (342), Expect = 1e-032
Identities = 85/170 (50%), Positives = 106/170 (62%), Gaps = 20/170 (11%)
Frame = +1
Query: 175 LINFEETELRLGLPGPLKDGDQGVKSGNG-KRGFLATVDLKLNFSSVNDDEHRSAGDGQL 351
L+N + TEL LGLPG + + KS G KRGF TVDL LN +S +G +
Sbjct: 5 LMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNL--------QSNKEGSV 56
Query: 352 EIK------KEKEDXXXXXXXXXXXQVVGWPPVRSFRKNIVTVQKKSTDQDQA--EKTGS 507
++K KEK QVVGWPPVR++RKN++T QK S+ ++A EK G+
Sbjct: 57 DLKNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGN 116
Query: 508 TSTSAA---FVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIGN 648
AA VKVSMDGAPYLRKVDLK+Y+SYQ+LS AL KMFSSFT+GN
Sbjct: 117 FGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGN 166
>TAIR9_protein||AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID
7); transcription factor | chr3:8194768-8196716 FORWARD
Length = 244
Score = 136 bits (342), Expect = 1e-032
Identities = 85/170 (50%), Positives = 106/170 (62%), Gaps = 20/170 (11%)
Frame = +1
Query: 175 LINFEETELRLGLPGPLKDGDQGVKSGNG-KRGFLATVDLKLNFSSVNDDEHRSAGDGQL 351
L+N + TEL LGLPG + + KS G KRGF TVDL LN +S +G +
Sbjct: 5 LMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNL--------QSNKEGSV 56
Query: 352 EIK------KEKEDXXXXXXXXXXXQVVGWPPVRSFRKNIVTVQKKSTDQDQA--EKTGS 507
++K KEK QVVGWPPVR++RKN++T QK S+ ++A EK G+
Sbjct: 57 DLKNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGN 116
Query: 508 TSTSAA---FVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIGN 648
AA VKVSMDGAPYLRKVDLK+Y+SYQ+LS AL KMFSSFT+GN
Sbjct: 117 FGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGN 166
>TAIR9_protein||AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/ transcription
repressor | chr4:8348521-8349923 REVERSE
Length = 229
Score = 132 bits (331), Expect = 2e-031
Identities = 80/155 (51%), Positives = 94/155 (60%), Gaps = 7/155 (4%)
Frame = +1
Query: 187 EETELRLGLPGPLKDGDQGVKSGNG-KRGFLATVDLKLNFSSVNDDEHRSAGDGQLEIKK 363
+ETEL LGLPG + + KSG G KRGF TVDLKLN S N H K
Sbjct: 4 KETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQS-NKQGHVDLNTN--GAPK 60
Query: 364 EKEDXXXXXXXXXXXQVVGWPPVRSFRKNIVTVQKKSTDQDQAEKTGSTSTSAAFVKVSM 543
EK QVVGWPPVR++RKN++ QK ++ G T AFVKVSM
Sbjct: 61 EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGT---VAFVKVSM 117
Query: 544 DGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIGN 648
DGAPYLRKVDLK+Y SY++LS AL KMFSSFT+G+
Sbjct: 118 DGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGS 152
>TAIR9_protein||AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 230
Score = 118 bits (295), Expect = 4e-027
Identities = 72/153 (47%), Positives = 90/153 (58%), Gaps = 15/153 (9%)
Frame = +1
Query: 193 TELRLGLPGPLKDGDQGVKSGNGKRGFLATVDLKLNFSS--VNDDEHRSAGDGQLEIKKE 366
TEL LGLPG GD KRGF TVDLKLN ++ N + + + K++
Sbjct: 12 TELCLGLPG----GDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFDSKEK 67
Query: 367 KEDXXXXXXXXXXXQVVGWPPVRSFRKNIVTVQKKSTDQDQAEKTGSTSTSAAFVKVSMD 546
QVVGWPPVRS+RKN++ +KS+ +A AAFVKVSMD
Sbjct: 68 SACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEA---------AAFVKVSMD 118
Query: 547 GAPYLRKVDLKLYQSYQELSTALGKMFSSFTIG 645
GAPYLRK+DL++Y+SY ELS AL MFSSFT+G
Sbjct: 119 GAPYLRKIDLRMYKSYDELSNALSNMFSSFTMG 151
>TAIR9_protein||AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 322
Score = 96 bits (238), Expect = 1e-020
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +1
Query: 409 QVVGWPPVRSFRKNIVTVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQ 588
QVVGWPP+RS+RKN + ST ++ E G FVKVSMDGAPYLRKVDL+ Y
Sbjct: 165 QVVGWPPIRSYRKNTMA---SSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYT 221
Query: 589 SYQELSTALGKMFSSFTIG 645
SYQ+LS+AL KMFS FT+G
Sbjct: 222 SYQQLSSALEKMFSCFTLG 240
>TAIR9_protein||AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 320
Score = 96 bits (238), Expect = 1e-020
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +1
Query: 409 QVVGWPPVRSFRKNIVTVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQ 588
QVVGWPP+RS+RKN + ST ++ E G FVKVSMDGAPYLRKVDL+ Y
Sbjct: 165 QVVGWPPIRSYRKNTMA---SSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYT 221
Query: 589 SYQELSTALGKMFSSFTIG 645
SYQ+LS+AL KMFS FT+G
Sbjct: 222 SYQQLSSALEKMFSCFTLG 240
>TAIR9_protein||AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 322
Score = 96 bits (238), Expect = 1e-020
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +1
Query: 409 QVVGWPPVRSFRKNIVTVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQ 588
QVVGWPP+RS+RKN + ST ++ E G FVKVSMDGAPYLRKVDL+ Y
Sbjct: 165 QVVGWPPIRSYRKNTMA---SSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYT 221
Query: 589 SYQELSTALGKMFSSFTIG 645
SYQ+LS+AL KMFS FT+G
Sbjct: 222 SYQQLSSALEKMFSCFTLG 240
>TAIR9_protein||AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2
(PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 306
Score = 95 bits (234), Expect = 4e-020
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Frame = +1
Query: 367 KEDXXXXXXXXXXXQVVGWPPVRSFRKNIVTVQK-----KSTDQDQAEKTGSTSTSAAFV 531
KE QVVGWPP+RSFRKN + + +++ ++AE +V
Sbjct: 129 KEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYV 188
Query: 532 KVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIG 645
KVSM+GAPYLRK+DLK Y+SY ELS+AL KMFS FTIG
Sbjct: 189 KVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIG 226
>TAIR9_protein||AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID
INDUCIBLE 9); transcription factor | chr5:26254463-26256134 FORWARD
Length = 339
Score = 95 bits (234), Expect = 4e-020
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Frame = +1
Query: 409 QVVGWPPVRSFRKNIVTVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQ 588
Q+VGWPPVRS+RKN + K++D E G + A FVKVSMDGAPYLRKVDL+ Y
Sbjct: 183 QIVGWPPVRSYRKNTLATTCKNSD----EVDGRPGSGALFVKVSMDGAPYLRKVDLRSYT 238
Query: 589 SYQELSTALGKMFSSFTIG 645
+Y ELS+AL KMF++FT+G
Sbjct: 239 NYGELSSALEKMFTTFTLG 257
>TAIR9_protein||AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID
INDUCIBLE 9); transcription factor | chr5:26254463-26256134 FORWARD
Length = 337
Score = 95 bits (234), Expect = 4e-020
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Frame = +1
Query: 409 QVVGWPPVRSFRKNIVTVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQ 588
Q+VGWPPVRS+RKN + K++D E G + A FVKVSMDGAPYLRKVDL+ Y
Sbjct: 183 QIVGWPPVRSYRKNTLATTCKNSD----EVDGRPGSGALFVKVSMDGAPYLRKVDLRSYT 238
Query: 589 SYQELSTALGKMFSSFTIG 645
+Y ELS+AL KMF++FT+G
Sbjct: 239 NYGELSSALEKMFTTFTLG 257
>TAIR9_protein||AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 169
Score = 59 bits (141), Expect = 3e-009
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +1
Query: 487 QAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIG 645
++ + + + + ++VKVSMDGAPYLRK+DLK+Y++Y EL AL MF FT+G
Sbjct: 63 RSNRKNNNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMF-KFTVG 114
>TAIR9_protein||AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID
INDUCIBLE 2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 175
Score = 55 bits (130), Expect = 5e-008
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1
Query: 511 STSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMF 627
+ S ++VKVSMDGAPYLRK+DLK Y++Y EL AL MF
Sbjct: 74 NNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMF 112
>TAIR9_protein||AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN
INDUCIBLE 2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 187
Score = 52 bits (123), Expect = 3e-007
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 496 KTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIG 645
K + +VKVSMDGAPYLRK+DL +Y+ Y EL +L MF F++G
Sbjct: 80 KKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMF-KFSVG 128
>TAIR9_protein||AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor |
chr1:5365764-5366460 REVERSE
Length = 164
Score = 52 bits (122), Expect = 4e-007
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Frame = +1
Query: 496 KTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSF-----TIGNSKIL 660
K T +++VKVS+DGA +LRK+DL++Y+ YQ+L++AL +F + T+ S+ +
Sbjct: 66 KNSLERTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECV 125
Query: 661 PI 666
PI
Sbjct: 126 PI 127
>TAIR9_protein||AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 190
Score = 51 bits (121), Expect = 6e-007
Identities = 25/40 (62%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +1
Query: 526 FVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIG 645
+VKVSMDGAPYLRK+DL Y+ Y EL AL MF F++G
Sbjct: 94 YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMF-KFSVG 132
>TAIR9_protein||AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor | chr3:5264100-5265378 FORWARD
Length = 198
Score = 50 bits (119), Expect = 9e-007
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +1
Query: 481 QDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMFSSFTIG 645
++ ++ +T +VKVSMDG PYLRK+DL Q Y +L+ AL K+F IG
Sbjct: 83 KNSCKEASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIG 137
>TAIR9_protein||AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1
(PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor |
chr3:5612801-5614208 REVERSE
Length = 270
Score = 50 bits (117), Expect = 2e-006
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +1
Query: 484 DQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKMF 627
D EK T FVK++MDG P RKVDL Y SY++LS + K+F
Sbjct: 139 DDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLF 186
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,538,984,440
Number of Sequences: 33410
Number of Extensions: 1538984440
Number of Successful Extensions: 86971430
Number of sequences better than 0.0: 0
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