BLASTX 7.6.2
Query= RU06041 /QuerySize=1936
(1935 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G61600.1 | Symbols: ATPOB1 | ATPOB1; protein b... 834 5e-242
TAIR9_protein||AT3G61600.2 | Symbols: ATPOB1 | ATPOB1; protein b... 834 5e-242
TAIR9_protein||AT2G46260.1 | Symbols: | BTB/POZ domain-containi... 827 5e-240
TAIR9_protein||AT4G01160.1 | Symbols: | BTB/POZ domain-containi... 510 2e-144
>TAIR9_protein||AT3G61600.1 | Symbols: ATPOB1 | ATPOB1; protein binding |
chr3:22795704-22797953 FORWARD
Length = 562
Score = 834 bits (2153), Expect = 5e-242
Identities = 424/541 (78%), Positives = 467/541 (86%), Gaps = 6/541 (1%)
Frame = +2
Query: 323 NTDLFDPRTTVMESEFVGTVTPSTXXXXXXXXXXXXXXXRLLRIEIMGDTPESRPDSEAC 502
NTDLFDP+T M+ +F + S+ RLLRIEIMG +SR + E C
Sbjct: 7 NTDLFDPKTQ-MDPDFTRHGS-SSDGDFGFAFNDSNFSDRLLRIEIMGGPSDSRSEVEGC 64
Query: 503 TSIADWARHRKRRREDFKKDAGVV--ELSECPEEQILNDNQPDMDD-EACEN-QDEDAVA 670
TSIADWARHRKRRRED KK++GV ++ CPEEQIL D QPDMD EN DE A
Sbjct: 65 TSIADWARHRKRRREDIKKESGVTISDIVACPEEQILTDEQPDMDGCPGGENPDDEGGEA 124
Query: 671 MVEESPSGDEGANSVDSDWGMDCSTVVRIKTLHISSPILAAKSPFFYKLFSNGMRESEQR 850
MVEE+ SGDE S + +WGMDCSTVVR+K LHISSPILAAKSPFFYKLFSNGMRESEQR
Sbjct: 125 MVEEALSGDEEETSSEPNWGMDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQR 184
Query: 851 HVTLRINASEEAALMELLNFMYSSTLNTTTAPGLLDVLMAADKFEVASCMRHCSRLLRNI 1030
HVTLRINASEEAALMELLNFMYS+ ++ TTAP LLDVLMAADKFEVASCMR+CSRLLRN+
Sbjct: 185 HVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNM 244
Query: 1031 PMTPESALLYLELPSSVLMAEAVQALTDAAKQYLAARYKDISKFIDEVMALPLAGIEAIV 1210
PMTPESALLYLELPSSVLMA+AVQ LTDAAKQ+LAARYKDI+KF +EVM+LPLAGIEAI+
Sbjct: 245 PMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVMSLPLAGIEAIL 304
Query: 1211 SSDDLQVASEDAVYDFVLKWSRTHYPKLEERREILGSRLARYIRFPYMTCRKLKKVLTCN 1390
SSD+LQ+ASEDAVYDF+LKW+R YP LEERREILGSRLA IRFP+MTCRKLKKVLTC+
Sbjct: 305 SSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMTCRKLKKVLTCS 364
Query: 1391 DFDHEAASKLVLEALFFKAEAPHRQRILAAEESATLNRRFVERAYKYRPVKVVEFDLPRQ 1570
DF+HE ASKLVLEALFFKAEAPHRQR LA+EESA+LNRR +ERAYKYRPVKVVEF+LPR
Sbjct: 365 DFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRPVKVVEFELPRP 424
Query: 1571 QCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEK 1750
QCVVYLDLKREEC LFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEK
Sbjct: 425 QCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEK 484
Query: 1751 GSVSFAVDYEFAARSKPTEEFISKYKGNYTFTGGKAVGYRNLFAIPWTNFMADDSLYFIN 1930
GSVSF VDYEF+ARSKP E+FISKYKGNYTFTGGKAVGYRNLF +PWT+F+A+DS YFIN
Sbjct: 485 GSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAEDSQYFIN 544
Query: 1931 G 1933
G
Sbjct: 545 G 545
>TAIR9_protein||AT3G61600.2 | Symbols: ATPOB1 | ATPOB1; protein binding |
chr3:22795704-22798069 FORWARD
Length = 562
Score = 834 bits (2153), Expect = 5e-242
Identities = 424/541 (78%), Positives = 467/541 (86%), Gaps = 6/541 (1%)
Frame = +2
Query: 323 NTDLFDPRTTVMESEFVGTVTPSTXXXXXXXXXXXXXXXRLLRIEIMGDTPESRPDSEAC 502
NTDLFDP+T M+ +F + S+ RLLRIEIMG +SR + E C
Sbjct: 7 NTDLFDPKTQ-MDPDFTRHGS-SSDGDFGFAFNDSNFSDRLLRIEIMGGPSDSRSEVEGC 64
Query: 503 TSIADWARHRKRRREDFKKDAGVV--ELSECPEEQILNDNQPDMDD-EACEN-QDEDAVA 670
TSIADWARHRKRRRED KK++GV ++ CPEEQIL D QPDMD EN DE A
Sbjct: 65 TSIADWARHRKRRREDIKKESGVTISDIVACPEEQILTDEQPDMDGCPGGENPDDEGGEA 124
Query: 671 MVEESPSGDEGANSVDSDWGMDCSTVVRIKTLHISSPILAAKSPFFYKLFSNGMRESEQR 850
MVEE+ SGDE S + +WGMDCSTVVR+K LHISSPILAAKSPFFYKLFSNGMRESEQR
Sbjct: 125 MVEEALSGDEEETSSEPNWGMDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQR 184
Query: 851 HVTLRINASEEAALMELLNFMYSSTLNTTTAPGLLDVLMAADKFEVASCMRHCSRLLRNI 1030
HVTLRINASEEAALMELLNFMYS+ ++ TTAP LLDVLMAADKFEVASCMR+CSRLLRN+
Sbjct: 185 HVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNM 244
Query: 1031 PMTPESALLYLELPSSVLMAEAVQALTDAAKQYLAARYKDISKFIDEVMALPLAGIEAIV 1210
PMTPESALLYLELPSSVLMA+AVQ LTDAAKQ+LAARYKDI+KF +EVM+LPLAGIEAI+
Sbjct: 245 PMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVMSLPLAGIEAIL 304
Query: 1211 SSDDLQVASEDAVYDFVLKWSRTHYPKLEERREILGSRLARYIRFPYMTCRKLKKVLTCN 1390
SSD+LQ+ASEDAVYDF+LKW+R YP LEERREILGSRLA IRFP+MTCRKLKKVLTC+
Sbjct: 305 SSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMTCRKLKKVLTCS 364
Query: 1391 DFDHEAASKLVLEALFFKAEAPHRQRILAAEESATLNRRFVERAYKYRPVKVVEFDLPRQ 1570
DF+HE ASKLVLEALFFKAEAPHRQR LA+EESA+LNRR +ERAYKYRPVKVVEF+LPR
Sbjct: 365 DFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRPVKVVEFELPRP 424
Query: 1571 QCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEK 1750
QCVVYLDLKREEC LFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEK
Sbjct: 425 QCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEK 484
Query: 1751 GSVSFAVDYEFAARSKPTEEFISKYKGNYTFTGGKAVGYRNLFAIPWTNFMADDSLYFIN 1930
GSVSF VDYEF+ARSKP E+FISKYKGNYTFTGGKAVGYRNLF +PWT+F+A+DS YFIN
Sbjct: 485 GSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAEDSQYFIN 544
Query: 1931 G 1933
G
Sbjct: 545 G 545
>TAIR9_protein||AT2G46260.1 | Symbols: | BTB/POZ domain-containing protein |
chr2:18996111-18998463 FORWARD
Length = 562
Score = 827 bits (2136), Expect = 5e-240
Identities = 425/547 (77%), Positives = 471/547 (86%), Gaps = 8/547 (1%)
Frame = +2
Query: 308 MKDLNNTDLFDPRTTVMESEFVGTVTPSTXXXXXXXXXXXXXXXRLLRIEIMGDTPESRP 487
M+ NNTDLFDP+T M+S F S+ RLLRIEI+G +SR
Sbjct: 1 MRGSNNTDLFDPKTE-MDSNF-SRHGSSSEGDFGFAFNDSNFSDRLLRIEILGGPSDSRS 58
Query: 488 DSEACTSIADWARHRKRRREDFKKDAGVV--ELSECPEEQILND-NQPDMDD-EACENQD 655
D+E CTSIADWARHRKRRRED KKD GV ++ C EEQIL D NQPDMDD +N D
Sbjct: 59 DAEGCTSIADWARHRKRRREDNKKDNGVAISDIVACAEEQILTDNNQPDMDDAPGGDNLD 118
Query: 656 EDAVAMVEESPSGDEGANSVDSDWGMDCSTVVRIKTLHISSPILAAKSPFFYKLFSNGMR 835
++ AMVEE+ SGD+ A+S + +WG+DCSTVVR+K LHISSPILAAKSPFFYKLFSNGMR
Sbjct: 119 DEGEAMVEEALSGDDDASS-EPNWGIDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMR 177
Query: 836 ESEQRHVTLRINASEEAALMELLNFMYSSTLNTTTAPGLLDVLMAADKFEVASCMRHCSR 1015
ESEQRHVTLRI+A EE ALMELLNFMYS++L+ TTAP LLDVLMAADKFEVASCMR+CSR
Sbjct: 178 ESEQRHVTLRISAQEEGALMELLNFMYSNSLSVTTAPALLDVLMAADKFEVASCMRYCSR 237
Query: 1016 LLRNIPMTPESALLYLELPSSVLMAEAVQALTDAAKQYLAARYKDISKFIDEVMALPLAG 1195
LLRN+PMTP+SALLYLELPSSVLMAEAVQ LTDAAKQ+LA+RYKDI+KF DEVMALPLAG
Sbjct: 238 LLRNMPMTPDSALLYLELPSSVLMAEAVQPLTDAAKQFLASRYKDITKFHDEVMALPLAG 297
Query: 1196 IEAIVSSDDLQVASEDAVYDFVLKWSRTHYPKLEERREILGSRLARYIRFPYMTCRKLKK 1375
IEAI+SSDDLQ+ASEDAVYDFVLKW+R Y LE+RREILGSRLA YIRFPYMTCRKLKK
Sbjct: 298 IEAILSSDDLQIASEDAVYDFVLKWARGQYSSLEDRREILGSRLALYIRFPYMTCRKLKK 357
Query: 1376 VLTCNDFDHEAASKLVLEALFFKAEAPHRQRILAAEESATLNRRFVERAYKYRPVKVVEF 1555
VLTC+DF+HE ASK VLEALFFKAEAPHRQRILAAE S ++NRRF+ERAYKYRPVKVVEF
Sbjct: 358 VLTCSDFEHEVASKQVLEALFFKAEAPHRQRILAAEGSDSMNRRFIERAYKYRPVKVVEF 417
Query: 1556 DLPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFL 1735
+LPR QCVVYLDLKREECA LFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFL
Sbjct: 418 ELPRPQCVVYLDLKREECAGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFL 477
Query: 1736 GMQEKGSVSFAVDYEFAARSKPT-EEFISKYKGNYTFTGGKAVGYRNLFAIPWTNFMADD 1912
GMQEKG+VSF VDYEFAAR K T EE++SKYKGNYTFTGGKAVGYRNLF IPWT+F+A+D
Sbjct: 478 GMQEKGAVSFGVDYEFAARDKSTKEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTSFIAED 537
Query: 1913 SLYFING 1933
S +FING
Sbjct: 538 SQHFING 544
>TAIR9_protein||AT4G01160.1 | Symbols: | BTB/POZ domain-containing protein |
chr4:494976-497006 REVERSE
Length = 506
Score = 510 bits (1312), Expect = 2e-144
Identities = 261/441 (59%), Positives = 340/441 (77%), Gaps = 8/441 (1%)
Frame = +2
Query: 623 DMDDEACENQDEDAVAMVEESP-SGDEGANSVDSDWGMDCSTVVRIKTLHISSPILAAKS 799
D+ +E N+ + V E+ P SG E N ++ + ++V+ ++ LHISS ILAAKS
Sbjct: 55 DIVNENSNNKTQVLVTAAEQEPKSGGEDENERLTN---NNTSVLSVQELHISSAILAAKS 111
Query: 800 PFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSSTLNTTTAPGLLDVLMAADK 979
PFFYKLFSNGM ESEQ+ +TL+I+ASEE A+MELL FMYS++L+ T + LLDVLM ADK
Sbjct: 112 PFFYKLFSNGMLESEQKQMTLKIDASEETAVMELLKFMYSNSLSVTASSALLDVLMVADK 171
Query: 980 FEVASCMRHCSRLLRNIPMTPESALLYLELPSSVLMAEAVQALTDAAKQYLAARYKDISK 1159
FEVASCM++CS+LL +PMT ES+LL L+LPSS+LMA++V+ LT+AA+Q++A+RYK++SK
Sbjct: 172 FEVASCMKYCSQLLLKMPMTLESSLLLLDLPSSLLMADSVKPLTNAARQFIASRYKNMSK 231
Query: 1160 F-IDEVMALPLAGIEAIVSSDDLQVASEDAVYDFVLKWSRTHYPKLEERREILGSRLARY 1336
++E+MALPL GIEAI++SD L++ SED VY+ VLKW ++HY LE R+E+LGS LARY
Sbjct: 232 ITMEELMALPLVGIEAILASDGLEIQSEDVVYEVVLKWVKSHYSVLEARQEVLGSHLARY 291
Query: 1337 IRFPYMTCRKLKKVLTCNDFDHEAASKLVLEALFFKAEA-PHRQRILAAEESATLNRRFV 1513
IRFP+MT +LKK+LT NDF ASKLV+EALFFK E+ H+ +LA E+ A+ +RRF
Sbjct: 292 IRFPHMTTDRLKKILTSNDFRPSVASKLVVEALFFKTESLAHQHVLLAHEQPASTSRRFA 351
Query: 1514 ERAYKYRPVKVVEFDLPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCN 1693
+RAY +RP+K+VEF +PR QC++YLDLKR+EC +++PS R+ SQ F LGGQGFFLSA CN
Sbjct: 352 KRAYVHRPIKIVEFAVPRPQCIIYLDLKRKECESIYPSSRISSQQFTLGGQGFFLSAQCN 411
Query: 1694 MDQQSSFHCFGLFLGMQEKG--SVSFAVDYEFAARSKPTEEFISKYKGNYTFTGGKAVGY 1867
MD HCFGLF+GMQE G S S VDY+F+ RSKPT EF+ K+KG YTFT GKAVG
Sbjct: 412 MDHLCLIHCFGLFIGMQENGSASASVTVDYDFSVRSKPTMEFVGKFKGIYTFTRGKAVGC 471
Query: 1868 RNLFAIPWTNFMADDSLYFIN 1930
RNL IPW F A + YFIN
Sbjct: 472 RNLLGIPWDIFTAKNCPYFIN 492
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,538,984,440
Number of Sequences: 33410
Number of Extensions: 1538984440
Number of Successful Extensions: 86971430
Number of sequences better than 0.0: 0
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