BLASTX 7.6.2
Query= RU06045 /QuerySize=484
(483 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G04730.1 | Symbols: IAA16 | IAA16; transcripti... 72 2e-013
TAIR9_protein||AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-... 70 4e-013
TAIR9_protein||AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE... 68 2e-012
TAIR9_protein||AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN ... 65 2e-011
TAIR9_protein||AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOC... 62 2e-010
TAIR9_protein||AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACET... 58 2e-009
TAIR9_protein||AT2G22670.1 | Symbols: IAA8 | IAA8; transcription... 53 7e-008
TAIR9_protein||AT2G22670.3 | Symbols: IAA8 | IAA8; transcription... 53 7e-008
TAIR9_protein||AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACET... 53 7e-008
>TAIR9_protein||AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 237
Score = 72 bits (174), Expect = 2e-013
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGLAPRAMEKCKNRS* 147
PWEMFV+SCKR+RIMKG EA+GLAPRA+EKCKNRS*
Sbjct: 202 PWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS* 237
>TAIR9_protein||AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID
7); transcription factor | chr3:8194768-8196716 FORWARD
Length = 244
Score = 70 bits (171), Expect = 4e-013
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGLAPRAMEK-CKNRS* 147
PWEMFVESCKRLRIMKG EAVGLAPRAMEK CKNRS*
Sbjct: 208 PWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS* 244
>TAIR9_protein||AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/ transcription
repressor | chr4:8348521-8349923 REVERSE
Length = 229
Score = 68 bits (165), Expect = 2e-012
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGLAPRAMEKCKNRS* 147
PW MFVESCKRLRIMKG EA+GLAPRAMEK KNRS*
Sbjct: 194 PWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS* 229
>TAIR9_protein||AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 230
Score = 65 bits (157), Expect = 2e-011
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGLAPRAMEKCKNRS* 147
PW MFV++CKRLR+MKG +A+GLAPRAMEKCK+R+*
Sbjct: 195 PWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA* 230
>TAIR9_protein||AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2
(PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 306
Score = 62 bits (148), Expect = 2e-010
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGLAPRAMEKCKNRS* 147
PWEMF+ SCK+LRIMK EA+GLAPR MEKC++R+*
Sbjct: 271 PWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN* 306
>TAIR9_protein||AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID
INDUCIBLE 9); transcription factor | chr5:26254463-26256134 FORWARD
Length = 337
Score = 58 bits (139), Expect = 2e-009
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGLAPRAMEKCKNRS* 147
PWEMF++ CK+L+IMKG +A+GLAPRAMEK K R+*
Sbjct: 302 PWEMFIDVCKKLKIMKGCDAIGLAPRAMEKSKMRA* 337
>TAIR9_protein||AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 322
Score = 53 bits (126), Expect = 7e-008
Identities = 20/34 (58%), Positives = 30/34 (88%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGLAPRAMEKCKNR 141
PWE+F E+C++L+IMKG +++GLAP A+EK KN+
Sbjct: 285 PWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
>TAIR9_protein||AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 322
Score = 53 bits (126), Expect = 7e-008
Identities = 20/34 (58%), Positives = 30/34 (88%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGLAPRAMEKCKNR 141
PWE+F E+C++L+IMKG +++GLAP A+EK KN+
Sbjct: 285 PWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
>TAIR9_protein||AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID
INDUCIBLE 9); transcription factor | chr5:26254463-26256134 FORWARD
Length = 339
Score = 53 bits (126), Expect = 7e-008
Identities = 24/38 (63%), Positives = 31/38 (81%), Gaps = 2/38 (5%)
Frame = +1
Query: 40 PWEMFVESCKRLRIMKGKEAVGL--APRAMEKCKNRS* 147
PWEMF++ CK+L+IMKG +A+GL APRAMEK K R+*
Sbjct: 302 PWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMRA* 339
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,538,984,440
Number of Sequences: 33410
Number of Extensions: 1538984440
Number of Successful Extensions: 86971430
Number of sequences better than 0.0: 0
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