BLASTX 7.6.2
Query= RU06096 /QuerySize=2721
(2720 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G24690.1 | Symbols: | ubiquitin-associated (U... 287 2e-077
>TAIR9_protein||AT4G24690.1 | Symbols: | ubiquitin-associated (UBA)/TS-N
domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
domain-containing protein | chr4:12741191-12744202 FORWARD
Length = 705
Score = 287 bits (734), Expect = 2e-077
Identities = 161/337 (47%), Positives = 202/337 (59%), Gaps = 20/337 (5%)
Frame = -1
Query: 1508 GMFHTGIRCDGCGCHPIIGPRFKSVVKADYDLCRICFSSIGNVAEYIRIDHPLSYRHPRP 1329
G+FH GIRCDGCG PI GPRFKS VK DYDLC IC+S +GN +Y R+D P+S +H P
Sbjct: 283 GVFHKGIRCDGCGVLPITGPRFKSKVKEDYDLCTICYSVMGNEGDYTRMDKPVSVQHLHP 342
Query: 1328 FKGMHEQ--PPWLGPSALPKILRNCGAKPGRPKLDSRFVLDVNVMDGTLMAPSTPFTKIW 1155
F+G Q PWL + RPKLDSRFVLDVNV+DGT++APS PFTKIW
Sbjct: 343 FRGPFTQFPNPWLSHPVPRATNGGAPLRCTRPKLDSRFVLDVNVIDGTVVAPSAPFTKIW 402
Query: 1154 RMRNNGGLIWPKGTQLMWIGGDRFSKSDSVEIEIPAHGVLAENELDIAVDFTAPESPGRY 975
+MRN+G L+WP+GTQ++WIGGDRF S SV+++IP GV +ELD+ VDF APE PGRY
Sbjct: 403 KMRNSGSLVWPQGTQIVWIGGDRFCNSLSVDLQIPKEGVPIYSELDVKVDFVAPELPGRY 462
Query: 974 ISYWRMASPSGQKFGQRVWVLIQVDTSLKDSFFESFQGXXXXXXXXXXXXXXXQMNFPQQ 795
ISYWRMA+ G KFGQRVWVLI VD SLK+S F G NFP +
Sbjct: 463 ISYWRMATSDGAKFGQRVWVLIHVDASLKNSVVNEFHG------LNLNASPSLDENFPSE 516
Query: 794 HVG---SDFVQPSSSNSVKEPAIPIPVKQPENEQDL---NFPINDSLLVGHSIPA-PTAP 636
+G + QP SS+ P VK + E ++ ++LLVG + PA P
Sbjct: 517 FLGIMNYESAQPGSSS-----VNPGTVKGTDLEGEVGETQAVEKENLLVGEAHPAIPHGH 571
Query: 635 VASSTVSYPTVDQSAPVPTAQVASSTVTYPTVDIFEP 525
SS+ S + +P +V S + T D+ P
Sbjct: 572 SPSSSSSSFNMVDFPSMPAVEVLSGGSSSTTKDVPVP 608
Score = 134 bits (336), Expect = 4e-031
Identities = 66/88 (75%), Positives = 75/88 (85%)
Frame = -1
Query: 458 ENPVEDTLLKELEDMGFKQANLNKEILRRNEYNLEQSVDDLCEVAEWDPILEELQEMGFS 279
+N VE T+LKELE+MGFK+ +LNKEILR NEYNLEQSVD LC V+EWDPILEELQEMGF
Sbjct: 615 KNDVEITMLKELEEMGFKEIDLNKEILRDNEYNLEQSVDALCGVSEWDPILEELQEMGFC 674
Query: 278 DTEMNKKLLAKNNGSIKRVVMDLINGDK 195
D NK+LL KNNGSIK VVMDL+ G+K
Sbjct: 675 DDVTNKRLLKKNNGSIKGVVMDLLTGEK 702
Score = 99 bits (245), Expect = 1e-020
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = -1
Query: 2492 SSTMVIKVKYGDTLRRFNARVDENAQLDLDMGGLRFKIYSLFNFQLDADITMTYVDEDGD 2313
++ +V+KV YG LRRF V N QLDL+M GL+ KI +LFN DA++++TY DEDGD
Sbjct: 5 ANALVVKVSYGGVLRRFRVPVKANGQLDLEMAGLKEKIAALFNLSADAELSLTYSDEDGD 64
Query: 2312 IVTLVDDEDLRDAMRQNMKFLRIDVH 2235
+V LVDD DL D Q +KFL+I+V+
Sbjct: 65 VVALVDDNDLFDVTNQRLKFLKINVN 90
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,538,984,440
Number of Sequences: 33410
Number of Extensions: 1538984440
Number of Successful Extensions: 86971430
Number of sequences better than 0.0: 0
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