BLASTX 7.6.2
Query= RU06166 /QuerySize=844
(843 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G41430.3 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 120 1e-027
TAIR9_protein||AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 120 1e-027
TAIR9_protein||AT2G41430.4 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 120 1e-027
TAIR9_protein||AT2G41430.2 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 120 1e-027
TAIR9_protein||AT4G14270.1 | Symbols: | Protein containing PAM2... 77 9e-015
TAIR9_protein||AT4G14270.2 | Symbols: | Protein containing PAM2... 77 9e-015
>TAIR9_protein||AT2G41430.3 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270098
FORWARD
Length = 121
Score = 120 bits (300), Expect = 1e-027
Identities = 59/84 (70%), Positives = 68/84 (80%), Gaps = 6/84 (7%)
Frame = +1
Query: 133 MALVSG-RSTLNPNAPLFVPAAFRQVEDFSPEWWQLVTTSTWYHEYWLSQNQD-EDGFYD 306
MA+VSG RSTLNP+APLF+PAA RQVEDFSPEWWQLVTTSTWY +YW+SQ Q DGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 307 NAQE----NYDNVADLLPETFDLD 366
N + + +VADLLPE+FD D
Sbjct: 61 NGENENGGGHIDVADLLPESFDFD 84
>TAIR9_protein||AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 120 bits (300), Expect = 1e-027
Identities = 59/84 (70%), Positives = 68/84 (80%), Gaps = 6/84 (7%)
Frame = +1
Query: 133 MALVSG-RSTLNPNAPLFVPAAFRQVEDFSPEWWQLVTTSTWYHEYWLSQNQD-EDGFYD 306
MA+VSG RSTLNP+APLF+PAA RQVEDFSPEWWQLVTTSTWY +YW+SQ Q DGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 307 NAQE----NYDNVADLLPETFDLD 366
N + + +VADLLPE+FD D
Sbjct: 61 NGENENGGGHIDVADLLPESFDFD 84
>TAIR9_protein||AT2G41430.4 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 120 bits (300), Expect = 1e-027
Identities = 59/84 (70%), Positives = 68/84 (80%), Gaps = 6/84 (7%)
Frame = +1
Query: 133 MALVSG-RSTLNPNAPLFVPAAFRQVEDFSPEWWQLVTTSTWYHEYWLSQNQD-EDGFYD 306
MA+VSG RSTLNP+APLF+PAA RQVEDFSPEWWQLVTTSTWY +YW+SQ Q DGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 307 NAQE----NYDNVADLLPETFDLD 366
N + + +VADLLPE+FD D
Sbjct: 61 NGENENGGGHIDVADLLPESFDFD 84
>TAIR9_protein||AT2G41430.2 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 120 bits (300), Expect = 1e-027
Identities = 59/84 (70%), Positives = 68/84 (80%), Gaps = 6/84 (7%)
Frame = +1
Query: 133 MALVSG-RSTLNPNAPLFVPAAFRQVEDFSPEWWQLVTTSTWYHEYWLSQNQD-EDGFYD 306
MA+VSG RSTLNP+APLF+PAA RQVEDFSPEWWQLVTTSTWY +YW+SQ Q DGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 307 NAQE----NYDNVADLLPETFDLD 366
N + + +VADLLPE+FD D
Sbjct: 61 NGENENGGGHIDVADLLPESFDFD 84
>TAIR9_protein||AT4G14270.1 | Symbols: | Protein containing PAM2 motif which
mediates interaction with the PABC domain of polyadenyl binding
proteins. | chr4:8218517-8219037 FORWARD
Length = 144
Score = 77 bits (189), Expect = 9e-015
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +1
Query: 154 STLNPNAPLFVPAAFRQVEDFSPEWWQLVTTSTWYHEYWLSQNQDED 294
STLNPNAP+F P FR+VEDFSP+WW LVTTS W+ ++WLS N + +
Sbjct: 10 STLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENE 56
>TAIR9_protein||AT4G14270.2 | Symbols: | Protein containing PAM2 motif which
mediates interaction with the PABC domain of polyadenyl binding
proteins. | chr4:8218517-8219037 FORWARD
Length = 142
Score = 77 bits (189), Expect = 9e-015
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +1
Query: 154 STLNPNAPLFVPAAFRQVEDFSPEWWQLVTTSTWYHEYWLSQNQDED 294
STLNPNAP+F P FR+VEDFSP+WW LVTTS W+ ++WLS N + +
Sbjct: 10 STLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENE 56
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,568,713,494
Number of Sequences: 33410
Number of Extensions: 1568713494
Number of Successful Extensions: 87004375
Number of sequences better than 0.0: 0
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