BLASTX 7.6.2
Query= RU06341 /QuerySize=999
(998 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G23750.1 | Symbols: | DNA-binding protein-rel... 208 4e-054
TAIR9_protein||AT1G10590.3 | Symbols: | DNA-binding protein-rel... 194 1e-049
TAIR9_protein||AT1G10590.1 | Symbols: | DNA-binding protein-rel... 192 3e-049
TAIR9_protein||AT1G10590.2 | Symbols: | DNA-binding protein-rel... 192 3e-049
TAIR9_protein||AT2G33845.1 | Symbols: | DNA-binding protein-rel... 166 2e-041
TAIR9_protein||AT4G28440.1 | Symbols: | DNA-binding protein-rel... 153 3e-037
TAIR9_protein||AT1G03810.1 | Symbols: | DNA-binding protein-rel... 146 3e-035
>TAIR9_protein||AT1G23750.1 | Symbols: | DNA-binding protein-related |
chr1:8400638-8401171 FORWARD
Length = 138
Score = 208 bits (529), Expect = 4e-054
Identities = 103/126 (81%), Positives = 113/126 (89%), Gaps = 1/126 (0%)
Frame = +2
Query: 95 MADS-KQALRKPTFTKVGQLRPSTSGHTLTVKVVSTKMVLQKGRADGPQVRQMRIAECLV 271
MADS K L+KP FTKV QLRP TSGH + VK+VSTKMVLQKGRADGPQ RQ+RI+EC+V
Sbjct: 1 MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIV 60
Query: 272 GDETGMIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPASFTVM 451
GDETG+I+FTARNDQVDLMKEGSTVTLRNAKIDM+KGSMRLAVDKWGRVEV EPASF V
Sbjct: 61 GDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVK 120
Query: 452 EDNNLS 469
ED N+S
Sbjct: 121 EDTNMS 126
>TAIR9_protein||AT1G10590.3 | Symbols: | DNA-binding protein-related |
chr1:3502324-3503033 REVERSE
Length = 154
Score = 194 bits (491), Expect = 1e-049
Identities = 99/133 (74%), Positives = 114/133 (85%), Gaps = 3/133 (2%)
Frame = +2
Query: 80 KVFSQMADSKQALRKPTFTKVGQLRPSTSGHTLTVKVVSTKMVLQK--GRADGPQVRQMR 253
+V +MA++ ALRKP FTKV +LRP T+GH+L VKVV+TKMV+Q+ GR GPQ RQMR
Sbjct: 10 RVVIKMAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMR 69
Query: 254 IAECLVGDETGMIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVA-E 430
IAECLVGDETG+IIFTARNDQVD+MKEGS VTLRNAKIDM+KGSMRLAVD+WGRVEVA E
Sbjct: 70 IAECLVGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEE 129
Query: 431 PASFTVMEDNNLS 469
P TV +DNNLS
Sbjct: 130 PTDITVKDDNNLS 142
>TAIR9_protein||AT1G10590.1 | Symbols: | DNA-binding protein-related |
chr1:3502324-3502991 REVERSE
Length = 140
Score = 192 bits (487), Expect = 3e-049
Identities = 98/128 (76%), Positives = 111/128 (86%), Gaps = 3/128 (2%)
Frame = +2
Query: 95 MADSKQALRKPTFTKVGQLRPSTSGHTLTVKVVSTKMVLQK--GRADGPQVRQMRIAECL 268
MA++ ALRKP FTKV +LRP T+GH+L VKVV+TKMV+Q+ GR GPQ RQMRIAECL
Sbjct: 1 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 60
Query: 269 VGDETGMIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVA-EPASFT 445
VGDETG+IIFTARNDQVD+MKEGS VTLRNAKIDM+KGSMRLAVD+WGRVEVA EP T
Sbjct: 61 VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 120
Query: 446 VMEDNNLS 469
V +DNNLS
Sbjct: 121 VKDDNNLS 128
>TAIR9_protein||AT1G10590.2 | Symbols: | DNA-binding protein-related |
chr1:3502324-3502991 REVERSE
Length = 140
Score = 192 bits (487), Expect = 3e-049
Identities = 98/128 (76%), Positives = 111/128 (86%), Gaps = 3/128 (2%)
Frame = +2
Query: 95 MADSKQALRKPTFTKVGQLRPSTSGHTLTVKVVSTKMVLQK--GRADGPQVRQMRIAECL 268
MA++ ALRKP FTKV +LRP T+GH+L VKVV+TKMV+Q+ GR GPQ RQMRIAECL
Sbjct: 1 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 60
Query: 269 VGDETGMIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVA-EPASFT 445
VGDETG+IIFTARNDQVD+MKEGS VTLRNAKIDM+KGSMRLAVD+WGRVEVA EP T
Sbjct: 61 VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 120
Query: 446 VMEDNNLS 469
V +DNNLS
Sbjct: 121 VKDDNNLS 128
>TAIR9_protein||AT2G33845.1 | Symbols: | DNA-binding protein-related |
chr2:14317781-14318712 FORWARD
Length = 183
Score = 166 bits (420), Expect = 2e-041
Identities = 85/121 (70%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Frame = +2
Query: 110 QALRKPTFTKVGQLRPSTSGHTLTVKVVSTKMVLQK-GRADGPQVRQMRIAECLVGDETG 286
Q +KP F KV QL+P TSGHTLTVKVV V QK G A +R RI+ECLVGDET
Sbjct: 50 QEKKKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETA 109
Query: 287 MIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPASFTVMEDNNL 466
I+FTARNDQV+LMK G+TV LRNAKIDMFKGSMRLAVDKWGR+E EPA TV EDNNL
Sbjct: 110 CILFTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKEDNNL 169
Query: 467 S 469
S
Sbjct: 170 S 170
>TAIR9_protein||AT4G28440.1 | Symbols: | DNA-binding protein-related |
chr4:14060054-14060970 FORWARD
Length = 154
Score = 153 bits (384), Expect = 3e-037
Identities = 77/123 (62%), Positives = 90/123 (73%), Gaps = 6/123 (4%)
Frame = +2
Query: 119 RKPTFTKVGQLRPSTSGHTLTVKVVSTKMVLQKGRADGP------QVRQMRIAECLVGDE 280
RKP F KV QL+P T+GHTLTVKV+ +V+ R P + RI ECL+GDE
Sbjct: 18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77
Query: 281 TGMIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPASFTVMEDN 460
TG I+FTARNDQVDLMK G+TV LRN++IDMFKG+MRL VDKWGR+E ASFTV EDN
Sbjct: 78 TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDN 137
Query: 461 NLS 469
NLS
Sbjct: 138 NLS 140
>TAIR9_protein||AT1G03810.1 | Symbols: | DNA-binding protein-related |
chr1:958759-959609 FORWARD
Length = 144
Score = 146 bits (366), Expect = 3e-035
Identities = 72/120 (60%), Positives = 88/120 (73%), Gaps = 3/120 (2%)
Frame = +2
Query: 119 RKPTFTKVGQLRPSTSGHTLTVKVVST---KMVLQKGRADGPQVRQMRIAECLVGDETGM 289
RKP F KV QL+P TSGHTL VKV+ + K ++K + RIAECL+GD+TG
Sbjct: 15 RKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAIRKSSLTQQPISSPRIAECLIGDDTGC 74
Query: 290 IIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPASFTVMEDNNLS 469
I+FTARNDQVDLMK G+TV LRNAKID+FK +MR+AVD+WGR+E+ P SF V NNLS
Sbjct: 75 ILFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMAVDRWGRIEITGPVSFEVNRANNLS 134
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,597,800,050
Number of Sequences: 33410
Number of Extensions: 1597800050
Number of Successful Extensions: 87032018
Number of sequences better than 0.0: 0
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