BLASTX 7.6.2
Query= RU06386 /QuerySize=851
(850 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G23820.1 | Symbols: GAE6 | GAE6 (UDP-D-GLUCURO... 175 3e-044
TAIR9_protein||AT2G45310.1 | Symbols: GAE4 | GAE4 (UDP-D-GLUCURO... 136 2e-032
TAIR9_protein||AT1G02000.1 | Symbols: GAE2 | GAE2 (UDP-D-GLUCURO... 129 2e-030
TAIR9_protein||AT4G00110.1 | Symbols: GAE3 | GAE3 (UDP-D-GLUCURO... 124 1e-028
TAIR9_protein||AT4G12250.1 | Symbols: GAE5 | GAE5 (UDP-D-GLUCURO... 122 3e-028
TAIR9_protein||AT4G30440.1 | Symbols: GAE1 | GAE1 (UDP-D-GLUCURO... 121 1e-027
>TAIR9_protein||AT3G23820.1 | Symbols: GAE6 | GAE6 (UDP-D-GLUCURONATE
4-EPIMERASE 6); UDP-glucuronate 4-epimerase/ catalytic |
chr3:8603645-8605027 FORWARD
Length = 461
Score = 175 bits (443), Expect = 3e-044
Identities = 86/116 (74%), Positives = 93/116 (80%)
Frame = -2
Query: 849 QGLPRRLDTAXXXXXXXXXXXXPAQLRIYNLGNTSPVPVGRLVSILEGLLSTKAKKHVIK 670
+G LDTA AQLR+YNLGNTSPVPVGRLVSILEGLL TKAKKH+IK
Sbjct: 340 KGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIK 399
Query: 669 MPRNGDVPYTHANVSLALHDFGYKPTTDLASGLRKFVKWYVSYYGIESRVKKESDN 502
MPRNGDVPYTHANVSLA DFGYKPTTDLA+GLRKFVKWYV YYGI+ RVKKE+ +
Sbjct: 400 MPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYYGIQPRVKKETSH 455
>TAIR9_protein||AT2G45310.1 | Symbols: GAE4 | GAE4 (UDP-D-GLUCURONATE
4-EPIMERASE 4); binding / catalytic/ coenzyme binding / racemase and
epimerase, acting on carbohydrates and derivatives |
chr2:18682652-18683965 FORWARD
Length = 438
Score = 136 bits (341), Expect = 2e-032
Identities = 65/104 (62%), Positives = 77/104 (74%)
Frame = -2
Query: 849 QGLPRRLDTAXXXXXXXXXXXXPAQLRIYNLGNTSPVPVGRLVSILEGLLSTKAKKHVIK 670
+G LDTA PAQLR++NLGNTSPVPV LV ILE L KAKK++IK
Sbjct: 325 KGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIK 384
Query: 669 MPRNGDVPYTHANVSLALHDFGYKPTTDLASGLRKFVKWYVSYY 538
MPRNGDVP+THAN+SLA + GYKPTTDL +GL+KFV+WY+SYY
Sbjct: 385 MPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 428
>TAIR9_protein||AT1G02000.1 | Symbols: GAE2 | GAE2 (UDP-D-GLUCURONATE
4-EPIMERASE 2); UDP-glucuronate 4-epimerase/ catalytic |
chr1:346052-347356 FORWARD
Length = 435
Score = 129 bits (324), Expect = 2e-030
Identities = 60/98 (61%), Positives = 75/98 (76%)
Frame = -2
Query: 831 LDTAXXXXXXXXXXXXPAQLRIYNLGNTSPVPVGRLVSILEGLLSTKAKKHVIKMPRNGD 652
LDTA AQLR++NLGNTSPVPV LVSILE LL KAK++++K+PRNGD
Sbjct: 326 LDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRNGD 385
Query: 651 VPYTHANVSLALHDFGYKPTTDLASGLRKFVKWYVSYY 538
VP+THAN+S A +FGYKP+TDL +GL+KFV+WY+ YY
Sbjct: 386 VPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYLGYY 423
>TAIR9_protein||AT4G00110.1 | Symbols: GAE3 | GAE3 (UDP-D-GLUCURONATE
4-EPIMERASE 3); UDP-glucuronate 4-epimerase/ catalytic |
chr4:38702-39994 REVERSE
Length = 431
Score = 124 bits (309), Expect = 1e-028
Identities = 57/98 (58%), Positives = 72/98 (73%)
Frame = -2
Query: 831 LDTAXXXXXXXXXXXXPAQLRIYNLGNTSPVPVGRLVSILEGLLSTKAKKHVIKMPRNGD 652
LDTA AQLR++NLGNTSPVPV LV+ILE LL KAK++++K+PRNGD
Sbjct: 325 LDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRNGD 384
Query: 651 VPYTHANVSLALHDFGYKPTTDLASGLRKFVKWYVSYY 538
V +THAN+S A + GYKPTTDL +GL+KF +WY+ YY
Sbjct: 385 VQFTHANISSAQRELGYKPTTDLQTGLKKFARWYLGYY 422
>TAIR9_protein||AT4G12250.1 | Symbols: GAE5 | GAE5 (UDP-D-GLUCURONATE
4-EPIMERASE 5); UDP-glucuronate 4-epimerase/ catalytic |
chr4:7289538-7290848 REVERSE
Length = 437
Score = 122 bits (305), Expect = 3e-028
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = -2
Query: 831 LDTAXXXXXXXXXXXXPAQLRIYNLGNTSPVPVGRLVSILEGLLSTKAKKHVIKMPRNGD 652
LDTA PA RIYNLGNTSPVPV +LV+ILE LL KAKK ++ +PRNGD
Sbjct: 330 LDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPLPRNGD 389
Query: 651 VPYTHANVSLALHDFGYKPTTDLASGLRKFVKWYVSYY 538
V +THAN++LA + GYKP DL +GL+KFVKWY+ +Y
Sbjct: 390 VEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGFY 427
>TAIR9_protein||AT4G30440.1 | Symbols: GAE1 | GAE1 (UDP-D-GLUCURONATE
4-EPIMERASE 1); UDP-glucuronate 4-epimerase/ catalytic |
chr4:14881976-14883265 REVERSE
Length = 430
Score = 121 bits (301), Expect = 1e-027
Identities = 57/105 (54%), Positives = 74/105 (70%)
Frame = -2
Query: 831 LDTAXXXXXXXXXXXXPAQLRIYNLGNTSPVPVGRLVSILEGLLSTKAKKHVIKMPRNGD 652
LD++ A RI+NLGNTSPV V LV ILE L KAK++ ++MP NGD
Sbjct: 322 LDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVEMPGNGD 381
Query: 651 VPYTHANVSLALHDFGYKPTTDLASGLRKFVKWYVSYYGIESRVK 517
VP+THAN+S A ++FGYKPTTDL +GL+KFV+WY+SYYG ++ K
Sbjct: 382 VPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYYGYNTKAK 426
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,597,800,050
Number of Sequences: 33410
Number of Extensions: 1597800050
Number of Successful Extensions: 87032018
Number of sequences better than 0.0: 0
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