BLASTX 7.6.2
Query= RU06391 /QuerySize=1364
(1363 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G43330.1 | Symbols: | malate dehydrogenase, c... 409 3e-114
TAIR9_protein||AT1G04410.1 | Symbols: | malate dehydrogenase, c... 405 5e-113
TAIR9_protein||AT5G56720.1 | Symbols: | malate dehydrogenase, c... 334 1e-091
TAIR9_protein||AT5G58330.2 | Symbols: | malate dehydrogenase (N... 172 7e-043
TAIR9_protein||AT5G58330.1 | Symbols: | malate dehydrogenase (N... 172 7e-043
TAIR9_protein||AT5G58330.3 | Symbols: | malate dehydrogenase (N... 158 1e-038
>TAIR9_protein||AT5G43330.1 | Symbols: | malate dehydrogenase, cytosolic,
putative | chr5:17390552-17392449 FORWARD
Length = 333
Score = 409 bits (1049), Expect = 3e-114
Identities = 206/228 (90%), Positives = 216/228 (94%)
Frame = +2
Query: 89 MAKELARVLVTGAAGQIGYALVPMIARGVMLGADQPVILHLLDIPFAAEALNGVKMELID 268
MAKE RVLVTGAAGQIGYALVPMIARG+MLGADQPVILH+LDIPFAAEALNGVKMEL+D
Sbjct: 1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVD 60
Query: 269 AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASAL*MY 448
AAFPLLKGVVATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYKSQASAL +
Sbjct: 61 AAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120
Query: 449 VAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQVSERLNVQVSDVK 628
A NCKVLVVANPANTNALILKEFAPSIPEKNI+CLTRLDHNRALGQVSERL+V VSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVK 180
Query: 629 NVIIWGNHSSSQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFIATV 772
NVIIWGNHSS+QYPDVNHATVKT GEKPVRELV +D WLNGEFI+TV
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTV 228
Score = 165 bits (416), Expect = 8e-041
Identities = 76/103 (73%), Positives = 85/103 (82%)
Frame = +3
Query: 777 RGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPV 956
RGAAIIKARK CDHIRDWV+GTPEGT+VSMGVYSDGSYNVPAGLIYSFPV
Sbjct: 231 RGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPV 290
Query: 957 TCCNGDWKIVQGLPIDEFSRKKLDATADELSEEKALAYTCIN* 1085
TC NG+W IVQGLPID+ SRKK+D TA+EL EEK LAY+C++*
Sbjct: 291 TCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAYSCLS* 333
>TAIR9_protein||AT1G04410.1 | Symbols: | malate dehydrogenase, cytosolic,
putative | chr1:1189418-1191267 REVERSE
Length = 333
Score = 405 bits (1039), Expect = 5e-113
Identities = 205/228 (89%), Positives = 215/228 (94%)
Frame = +2
Query: 89 MAKELARVLVTGAAGQIGYALVPMIARGVMLGADQPVILHLLDIPFAAEALNGVKMELID 268
MAKE RVLVTGAAGQIGYALVPMIARG+MLGADQPVILH+LDIP AAEALNGVKMELID
Sbjct: 1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELID 60
Query: 269 AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASAL*MY 448
AAFPLLKGVVATTD VE CTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYKSQA+AL +
Sbjct: 61 AAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKH 120
Query: 449 VAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQVSERLNVQVSDVK 628
A NCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQ+SERL+V VSDVK
Sbjct: 121 AAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVK 180
Query: 629 NVIIWGNHSSSQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFIATV 772
NVIIWGNHSSSQYPDVNHA V+T SGEKPVRELV DDAWL+GEFI+TV
Sbjct: 181 NVIIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTV 228
Score = 166 bits (420), Expect = 3e-041
Identities = 77/103 (74%), Positives = 85/103 (82%)
Frame = +3
Query: 777 RGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPV 956
RGAAIIKARK CDHIRDWVLGTPEGT+VSMGVYSDGSY+VP+GLIYSFPV
Sbjct: 231 RGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPV 290
Query: 957 TCCNGDWKIVQGLPIDEFSRKKLDATADELSEEKALAYTCIN* 1085
TC NGDW IVQGLPIDE SRKK+D TA+EL EEK LAY+C++*
Sbjct: 291 TCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEKDLAYSCLS* 333
>TAIR9_protein||AT5G56720.1 | Symbols: | malate dehydrogenase, cytosolic,
putative | chr5:22945537-22946718 FORWARD
Length = 340
Score = 334 bits (854), Expect = 1e-091
Identities = 163/229 (71%), Positives = 194/229 (84%)
Frame = +2
Query: 86 SMAKELARVLVTGAAGQIGYALVPMIARGVMLGADQPVILHLLDIPFAAEALNGVKMELI 265
++ K+ RVL+TGAAG IGYA+ PMIARG+MLG DQP+ILHLLDI A+ +L VKMEL
Sbjct: 6 NIEKDPIRVLITGAAGNIGYAIAPMIARGIMLGPDQPMILHLLDIEPASSSLEAVKMELQ 65
Query: 266 DAAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASAL*M 445
D+AFPLLKGV+ATT+VVEAC VNI +M+GGFPR GMERKDVMSKNV IYK+QASAL
Sbjct: 66 DSAFPLLKGVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKAQASALER 125
Query: 446 YVAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQVSERLNVQVSDV 625
Y + +CKVLVVANPANTNALILKEFAPSIPE+NI+CLTRLDHNRAL Q++++L+V VS V
Sbjct: 126 YASDDCKVLVVANPANTNALILKEFAPSIPEENITCLTRLDHNRALAQLADKLSVPVSSV 185
Query: 626 KNVIIWGNHSSSQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFIATV 772
KNVI+WGNHSS+QYPD NHATV T +G++P++ELV D WL EFI V
Sbjct: 186 KNVIVWGNHSSTQYPDTNHATVSTKTGDRPLKELVTDHNWLKNEFIVEV 234
Score = 150 bits (377), Expect = 3e-036
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +3
Query: 777 RGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPV 956
RGAA+++ARK CDHIRDW LGTP+GTWVSMGV SDGSY +P GL+YSFPV
Sbjct: 237 RGAAVLRARKQSSAFSAAGAACDHIRDWFLGTPKGTWVSMGVCSDGSYGIPPGLVYSFPV 296
Query: 957 TCCNGDWKIVQGLPIDEFSRKKLDATADELSEEKALAYTCIN 1082
C G WKIVQGL IDEFSR+K+D +A EL+EEK LAY+C+N
Sbjct: 297 ICEKGSWKIVQGLSIDEFSREKMDDSARELAEEKDLAYSCLN 338
>TAIR9_protein||AT5G58330.2 | Symbols: | malate dehydrogenase (NADP),
chloroplast, putative | chr5:23580010-23582287 REVERSE
Length = 443
Score = 172 bits (434), Expect = 7e-043
Identities = 99/226 (43%), Positives = 131/226 (57%), Gaps = 4/226 (1%)
Frame = +2
Query: 95 KELARVLVTGAAGQIGYALVPMIARGVMLGADQPVILHLLDIPFAAEALNGVKMELIDAA 274
K+L + V+GAAG I L+ +A G + G DQP+ L LL + +AL GV MEL D+
Sbjct: 96 KKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 155
Query: 275 FPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASAL*MYVA 454
FPLL+ V TD E V A+++G PR GMER D++ N I+ Q AL +
Sbjct: 156 FPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAAS 215
Query: 455 ANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQVSERLNVQVSDVKNV 634
N KVLVV NP NTNALI + AP+IP KN LTRLD NRA Q++ + V V N+
Sbjct: 216 PNVKVLVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 275
Query: 635 IIWGNHSSSQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFIATV 772
IWGNHS++Q PD +A + PV+E++ D WL F +V
Sbjct: 276 TIWGNHSTTQVPDFLNARI----NGLPVKEVITDHKWLEEGFTESV 317
Score = 60 bits (143), Expect = 4e-009
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Frame = +3
Query: 777 RGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFP 953
RG +I+ D I+ V TPEG W S GVY+DG+ Y + GL++S P
Sbjct: 320 RGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMP 379
Query: 954 V-TCCNGDWKIVQGLPIDEFSRKKLDATADELSEEK 1058
+ +GD+++V+ + ID++ R+++ + EL EK
Sbjct: 380 CRSKGDGDYELVKDVEIDDYLRQRIAKSEAELLAEK 415
>TAIR9_protein||AT5G58330.1 | Symbols: | malate dehydrogenase (NADP),
chloroplast, putative | chr5:23580010-23582287 REVERSE
Length = 444
Score = 172 bits (434), Expect = 7e-043
Identities = 99/226 (43%), Positives = 131/226 (57%), Gaps = 4/226 (1%)
Frame = +2
Query: 95 KELARVLVTGAAGQIGYALVPMIARGVMLGADQPVILHLLDIPFAAEALNGVKMELIDAA 274
K+L + V+GAAG I L+ +A G + G DQP+ L LL + +AL GV MEL D+
Sbjct: 97 KKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 156
Query: 275 FPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASAL*MYVA 454
FPLL+ V TD E V A+++G PR GMER D++ N I+ Q AL +
Sbjct: 157 FPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAAS 216
Query: 455 ANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQVSERLNVQVSDVKNV 634
N KVLVV NP NTNALI + AP+IP KN LTRLD NRA Q++ + V V N+
Sbjct: 217 PNVKVLVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 276
Query: 635 IIWGNHSSSQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFIATV 772
IWGNHS++Q PD +A + PV+E++ D WL F +V
Sbjct: 277 TIWGNHSTTQVPDFLNARI----NGLPVKEVITDHKWLEEGFTESV 318
Score = 60 bits (143), Expect = 4e-009
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Frame = +3
Query: 777 RGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFP 953
RG +I+ D I+ V TPEG W S GVY+DG+ Y + GL++S P
Sbjct: 321 RGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMP 380
Query: 954 V-TCCNGDWKIVQGLPIDEFSRKKLDATADELSEEK 1058
+ +GD+++V+ + ID++ R+++ + EL EK
Sbjct: 381 CRSKGDGDYELVKDVEIDDYLRQRIAKSEAELLAEK 416
>TAIR9_protein||AT5G58330.3 | Symbols: | malate dehydrogenase (NADP),
chloroplast, putative | chr5:23580010-23581751 REVERSE
Length = 335
Score = 158 bits (398), Expect = 1e-038
Identities = 90/204 (44%), Positives = 118/204 (57%), Gaps = 4/204 (1%)
Frame = +2
Query: 161 IARGVMLGADQPVILHLLDIPFAAEALNGVKMELIDAAFPLLKGVVATTDVVEACTGVNI 340
+A G + G DQP+ L LL + +AL GV MEL D+ FPLL+ V TD E V
Sbjct: 10 LASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVDIGTDPNEVFQDVEW 69
Query: 341 AVMVGGFPRKEGMERKDVMSKNVSIYKSQASAL*MYVAANCKVLVVANPANTNALILKEF 520
A+++G PR GMER D++ N I+ Q AL + N KVLVV NP NTNALI +
Sbjct: 70 AILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVLVVGNPCNTNALICLKN 129
Query: 521 APSIPEKNISCLTRLDHNRALGQVSERLNVQVSDVKNVIIWGNHSSSQYPDVNHATVKTP 700
AP+IP KN LTRLD NRA Q++ + V V N+ IWGNHS++Q PD +A +
Sbjct: 130 APNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARI--- 186
Query: 701 SGEKPVRELVADDAWLNGEFIATV 772
PV+E++ D WL F +V
Sbjct: 187 -NGLPVKEVITDHKWLEEGFTESV 209
Score = 60 bits (143), Expect = 4e-009
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Frame = +3
Query: 777 RGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFP 953
RG +I+ D I+ V TPEG W S GVY+DG+ Y + GL++S P
Sbjct: 212 RGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMP 271
Query: 954 V-TCCNGDWKIVQGLPIDEFSRKKLDATADELSEEK 1058
+ +GD+++V+ + ID++ R+++ + EL EK
Sbjct: 272 CRSKGDGDYELVKDVEIDDYLRQRIAKSEAELLAEK 307
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,597,800,050
Number of Sequences: 33410
Number of Extensions: 1597800050
Number of Successful Extensions: 87032018
Number of sequences better than 0.0: 0
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