BLASTX 7.6.2
Query= RU06416 /QuerySize=748
(747 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding... 155 3e-038
TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |... 148 4e-036
TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7... 144 9e-035
TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding... 137 8e-033
TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding... 137 8e-033
TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA... 136 2e-032
TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A);... 135 4e-032
TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTA... 135 4e-032
TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA... 134 5e-032
TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A P... 84 6e-017
TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding... 81 5e-016
TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 81 7e-016
TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 81 7e-016
TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 81 7e-016
TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |... 49 3e-006
>TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding |
chr5:575437-576456 FORWARD
Length = 154
Score = 155 bits (391), Expect = 3e-038
Identities = 77/106 (72%), Positives = 83/106 (78%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNK 304
V+RS K+GLQFPVGRIGRYLK GRY++RVG+GAP GNAARDNK
Sbjct: 25 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 84
Query: 305 KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNS 442
KNRIIPRHVLLAVRNDEELG LL GVTIAHGGVLPNINP+LLPK S
Sbjct: 85 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKS 130
>TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |
chr5:24115605-24116144 REVERSE
Length = 151
Score = 148 bits (373), Expect = 4e-036
Identities = 74/106 (69%), Positives = 82/106 (77%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNK 304
V++S KAGLQFPVGRI R+LK GRYAQR+G GAP GNAARDNK
Sbjct: 25 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 84
Query: 305 KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNS 442
K+RIIPRH+LLA+RNDEELGKLL+GVTIAHGGVLPNIN VLLPK S
Sbjct: 85 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKS 130
>TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7); DNA binding
| chr5:9792807-9793365 REVERSE
Length = 151
Score = 144 bits (361), Expect = 9e-035
Identities = 73/106 (68%), Positives = 78/106 (73%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNK 304
V++S KAGLQFPVGRI RYLK GRYA R GSGAP GNAARDNK
Sbjct: 26 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 85
Query: 305 KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNS 442
KNRI PRH+ LA+RNDEELG+LL GVTIA GGVLPNINPVLLPK S
Sbjct: 86 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKS 131
>TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding |
chr1:18926948-18927443 FORWARD
Length = 133
Score = 137 bits (344), Expect = 8e-033
Identities = 67/106 (63%), Positives = 79/106 (74%)
Frame = +2
Query: 128 TRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 307
TRS+KAGLQFPVGRI R+LK G+YA+RVG+GAP GNAARDNKK
Sbjct: 18 TRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 77
Query: 308 NRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNSG 445
RI+PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK +G
Sbjct: 78 TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG 123
>TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding |
chr3:7229472-7229963 FORWARD
Length = 133
Score = 137 bits (344), Expect = 8e-033
Identities = 67/106 (63%), Positives = 79/106 (74%)
Frame = +2
Query: 128 TRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 307
+RS+KAGLQFPVGRI R+LKNG+YA RVG+GAP GNAARDNKK
Sbjct: 18 SRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 77
Query: 308 NRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNSG 445
RI+PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK +G
Sbjct: 78 TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAG 123
>TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | H2AXA;
DNA binding | chr1:2847144-2847676 REVERSE
Length = 143
Score = 136 bits (340), Expect = 2e-032
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNK 304
V+RS+KAGLQFPVGRI R+LK+G+YA+RVG+GAP GNAARDNK
Sbjct: 23 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 82
Query: 305 KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNSG 445
K RI+PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLP G
Sbjct: 83 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG 129
>TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding |
chr4:13637515-13638325 REVERSE
Length = 132
Score = 135 bits (338), Expect = 4e-032
Identities = 66/106 (62%), Positives = 79/106 (74%)
Frame = +2
Query: 128 TRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 307
+RS+KAGLQFPVGRI R+LK G+YA+RVG+GAP GNAARDNKK
Sbjct: 18 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 77
Query: 308 NRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNSG 445
RI+PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK +G
Sbjct: 78 TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG 123
>TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO
AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22196540-22197279
FORWARD
Length = 131
Score = 135 bits (338), Expect = 4e-032
Identities = 66/106 (62%), Positives = 79/106 (74%)
Frame = +2
Query: 128 TRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 307
+RS+KAGLQFPVGRI R+LK G+YA+RVG+GAP GNAARDNKK
Sbjct: 18 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 77
Query: 308 NRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNSG 445
RI+PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK +G
Sbjct: 78 TRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG 123
>TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX |
GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding |
chr1:20414607-20415206 REVERSE
Length = 143
Score = 134 bits (337), Expect = 5e-032
Identities = 67/107 (62%), Positives = 77/107 (71%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNK 304
V+RS+KAGLQFPVGRI R+LK G+YA+RVG+GAP GNAARDNK
Sbjct: 23 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 82
Query: 305 KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNSG 445
K RI+PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLP G
Sbjct: 83 KTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG 129
>TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A PROTEIN 9); DNA
binding | chr1:19645409-19646221 FORWARD
Length = 135
Score = 84 bits (207), Expect = 6e-017
Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQ-RVGSGAPXXXXXXXXXXXXXXXXXXGNAARDN 301
+TRS++AGLQFPVGR+ R LK A RVG+ A GNA++D
Sbjct: 27 ITRSSRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDL 86
Query: 302 KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNS 442
K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K++
Sbjct: 87 KVKRISPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSA 132
>TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding |
chr3:20196532-20197466 FORWARD
Length = 137
Score = 81 bits (199), Expect = 5e-016
Identities = 48/107 (44%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQ-RVGSGAPXXXXXXXXXXXXXXXXXXGNAARDN 301
++RS +AG+QFPVGRI R LK A RVG+ A GNA++D
Sbjct: 29 ISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDL 88
Query: 302 KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKNS 442
K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K +
Sbjct: 89 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTT 134
>TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 81 bits (198), Expect = 7e-016
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQ-RVGSGAPXXXXXXXXXXXXXXXXXXGNAARDN 301
++RS++AG+QFPVGRI R LK A RVG+ A GNA++D
Sbjct: 29 ISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDL 88
Query: 302 KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 436
K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K
Sbjct: 89 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNK 132
>TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 81 bits (198), Expect = 7e-016
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQ-RVGSGAPXXXXXXXXXXXXXXXXXXGNAARDN 301
++RS++AG+QFPVGRI R LK A RVG+ A GNA++D
Sbjct: 29 ISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDL 88
Query: 302 KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 436
K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K
Sbjct: 89 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNK 132
>TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 81 bits (198), Expect = 7e-016
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Frame = +2
Query: 125 VTRSTKAGLQFPVGRIGRYLKNGRYAQ-RVGSGAPXXXXXXXXXXXXXXXXXXGNAARDN 301
++RS++AG+QFPVGRI R LK A RVG+ A GNA++D
Sbjct: 29 ISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDL 88
Query: 302 KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 436
K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K
Sbjct: 89 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNK 132
>TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |
chr4:7884516-7885664 FORWARD
Length = 119
Score = 49 bits (115), Expect = 3e-006
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 146 GLQFPVGRIGRYLKNGRYA-QRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIP 322
G F V RI + LKN A VG+ N ++D K RI P
Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITP 87
Query: 323 RHVLLAVRNDEELGKLLAGVTIAHGGVLPNIN 418
RH+ LA+R DEEL L+ G TI G V+P+I+
Sbjct: 88 RHLQLAIRGDEELDTLIKG-TIIGGSVIPHIH 118
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,658,669,864
Number of Sequences: 33410
Number of Extensions: 1658669864
Number of Successful Extensions: 92048679
Number of sequences better than 0.0: 0
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