BLASTX 7.6.2
Query= RU06444 /QuerySize=1184
(1183 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G54680.1 | Symbols: ILR3 | ILR3 (iaa-leucine r... 207 1e-053
TAIR9_protein||AT1G51070.1 | Symbols: | basic helix-loop-helix ... 181 1e-045
TAIR9_protein||AT3G23210.1 | Symbols: | basic helix-loop-helix ... 78 9e-015
TAIR9_protein||AT4G14410.1 | Symbols: | basic helix-loop-helix ... 74 1e-013
TAIR9_protein||AT4G14410.2 | Symbols: | basic helix-loop-helix ... 74 1e-013
TAIR9_protein||AT3G19860.1 | Symbols: | basic helix-loop-helix ... 57 2e-008
TAIR9_protein||AT3G19860.2 | Symbols: | basic helix-loop-helix ... 57 2e-008
TAIR9_protein||AT4G36060.1 | Symbols: | basic helix-loop-helix ... 50 2e-006
TAIR9_protein||AT4G36060.2 | Symbols: | basic helix-loop-helix ... 50 2e-006
>TAIR9_protein||AT5G54680.1 | Symbols: ILR3 | ILR3 (iaa-leucine resistant3); DNA
binding / transcription factor | chr5:22217270-22218993 FORWARD
Length = 235
Score = 207 bits (526), Expect = 1e-053
Identities = 120/235 (51%), Positives = 131/235 (55%), Gaps = 2/235 (0%)
Frame = +2
Query: 140 MVSPENTNWLYDYGLMDDANFPVSSSAFNWPVQPNIPGSSSVSAELDGSLGDVEGLXXXX 319
MVSPEN NW+ D D +F + F+WPVQ I SS+ SA +DGS G+ E
Sbjct: 1 MVSPENANWICDLIDADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEASKEPG 60
Query: 320 XXXXXXXXXXXXXXXXXXXXXLRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVN 499
RRDRLNDKF+ELG+ILEPG PPKTDKAAIL+DAVRMV
Sbjct: 61 SKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVT 120
Query: 500 QLRVEAQKLKDSNSSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTA-QPSFM- 673
QLR EAQKLKDSNSSLQ AM A QPSF
Sbjct: 121 QLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFP 180
Query: 674 XXXXXXXXXXXXQGQAHGNKMVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA* 838
QGQA GNKMVP I YPGVAMWQFMPPA+VDTSQDHVLRPPVA*
Sbjct: 181 APPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA* 235
>TAIR9_protein||AT1G51070.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:18928018-18929513 FORWARD
Length = 227
Score = 181 bits (457), Expect = 1e-045
Identities = 109/233 (46%), Positives = 123/233 (52%), Gaps = 6/233 (2%)
Frame = +2
Query: 140 MVSPENTNWLYDYGLMDDANFPVSSSAFNWPVQPNIPGSSSVSAELDGSLGDVEGLXXXX 319
MVSPENTNWL DY L++ A F + F W I GS++VS E+DG L D + +
Sbjct: 1 MVSPENTNWLSDYPLIEGA-FSDQNPTFPW----QIDGSATVSVEVDGFLCDADVIKEPS 55
Query: 320 XXXXXXXXXXXXXXXXXXXXXLRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVN 499
RRDRLNDKF EL S+LEPGR PKTDK AI+ DA+RMVN
Sbjct: 56 SRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVN 115
Query: 500 QLRVEAQKLKDSNSSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTAQPSFMXX 679
Q R EAQKLKD NSSLQ A+ QP
Sbjct: 116 QARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQ-PQP 174
Query: 680 XXXXXXXXXXQGQAHGNKMVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA* 838
Q QA G+K+VPF YPG AMWQFMPPAAVDTSQDHVLRPPVA*
Sbjct: 175 CFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA* 227
>TAIR9_protein||AT3G23210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:8283255-8284915 REVERSE
Length = 321
Score = 78 bits (191), Expect = 9e-015
Identities = 36/55 (65%), Positives = 48/55 (87%)
Frame = +2
Query: 383 LRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVNQLRVEAQKLKDSNSSL 547
LRR++LNDKF++L S+LEPGR PKTDK+AIL DA+R+VNQLR EA +L+++N L
Sbjct: 173 LRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKL 227
>TAIR9_protein||AT4G14410.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:8300077-8301503 FORWARD
Length = 284
Score = 74 bits (181), Expect = 1e-013
Identities = 34/55 (61%), Positives = 47/55 (85%)
Frame = +2
Query: 383 LRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVNQLRVEAQKLKDSNSSL 547
LRR++LN++F++L S+LEPGR PKTDK AIL DA+R++NQLR EA KL+++N L
Sbjct: 141 LRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKL 195
>TAIR9_protein||AT4G14410.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:8300418-8301503 FORWARD
Length = 278
Score = 74 bits (181), Expect = 1e-013
Identities = 34/55 (61%), Positives = 47/55 (85%)
Frame = +2
Query: 383 LRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVNQLRVEAQKLKDSNSSL 547
LRR++LN++F++L S+LEPGR PKTDK AIL DA+R++NQLR EA KL+++N L
Sbjct: 135 LRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKL 189
>TAIR9_protein||AT3G19860.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:6904579-6905863 FORWARD
Length = 285
Score = 57 bits (136), Expect = 2e-008
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 383 LRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVNQLRVEAQKLKDSNSSL 547
LRR++LN+ FVELG++L+P R PK DKA IL D V+++ +L E KLK ++L
Sbjct: 16 LRREKLNEHFVELGNVLDPER-PKNDKATILTDTVQLLKELTSEVNKLKSEYTAL 69
>TAIR9_protein||AT3G19860.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:6903842-6905863 FORWARD
Length = 338
Score = 57 bits (136), Expect = 2e-008
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 383 LRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVNQLRVEAQKLKDSNSSL 547
LRR++LN+ FVELG++L+P R PK DKA IL D V+++ +L E KLK ++L
Sbjct: 69 LRREKLNEHFVELGNVLDPER-PKNDKATILTDTVQLLKELTSEVNKLKSEYTAL 122
>TAIR9_protein||AT4G36060.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17055397-17056567 FORWARD
Length = 287
Score = 50 bits (119), Expect = 2e-006
Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 383 LRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVNQLRVEAQKLKDSNSSL 547
LRRD+L ++F+ELG+ L+P R PK+DKA++L D ++M+ + + +LK +L
Sbjct: 55 LRRDKLKEQFLELGNALDPNR-PKSDKASVLTDTIQMLKDVMNQVDRLKAEYETL 108
>TAIR9_protein||AT4G36060.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17055521-17056567 FORWARD
Length = 269
Score = 50 bits (119), Expect = 2e-006
Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 383 LRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVNQLRVEAQKLKDSNSSL 547
LRRD+L ++F+ELG+ L+P R PK+DKA++L D ++M+ + + +LK +L
Sbjct: 37 LRRDKLKEQFLELGNALDPNR-PKSDKASVLTDTIQMLKDVMNQVDRLKAEYETL 90
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,658,669,864
Number of Sequences: 33410
Number of Extensions: 1658669864
Number of Successful Extensions: 92048679
Number of sequences better than 0.0: 0
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