BLASTX 7.6.2
Query= RU07124 /QuerySize=591
(590 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G71260.1 | Symbols: ATWHY2 | ATWHY2 (A. THALIA... 222 2e-058
TAIR9_protein||AT2G02740.2 | Symbols: ATWHY3, PTAC11, WHY3 | WHY... 149 1e-036
TAIR9_protein||AT1G14410.1 | Symbols: ATWHY1, PTAC1, WHY1 | WHY1... 149 2e-036
TAIR9_protein||AT2G02740.1 | Symbols: ATWHY3, PTAC11, WHY3 | WHY... 147 5e-036
>TAIR9_protein||AT1G71260.1 | Symbols: ATWHY2 | ATWHY2 (A. THALIANA WHIRLY 2);
DNA binding | chr1:26861849-26863391 REVERSE
Length = 239
Score = 222 bits (564), Expect = 2e-058
Identities = 120/187 (64%), Positives = 138/187 (73%), Gaps = 9/187 (4%)
Frame = -1
Query: 590 YAPFSIYKGKAALSLSPVLPTFTKLXXXXXXXXXXXXXMLKFMPAIGERKYDSEKKQLFA 411
+AP+SI+KGKAALS+ PVLP+FT++ M+ FMPAIGERKYD EKKQ FA
Sbjct: 55 FAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFA 114
Query: 410 LSATEVGSLISLGPKDSCELFHDPSMQSSNAGQVRKSLSIKPHAD--GYFISLTVVNNLL 237
LS TEVGSLIS+G KDS E FHDPSM+SSNAGQVRKSLS+KPHAD GYFISL+V N++L
Sbjct: 115 LSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSIL 174
Query: 236 KTRESFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNKVPRGIEVHKSE-----MAEPQL 72
KT + F VPVT AEFAVMKTA SFALPHIMGW+RLT V E S EPQL
Sbjct: 175 KTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHV--NTEALPSRNVSHLKTEPQL 232
Query: 71 LDEWER* 51
EW++*
Sbjct: 233 ELEWDK* 239
>TAIR9_protein||AT2G02740.2 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3);
DNA binding | chr2:769389-770993 FORWARD
Length = 268
Score = 149 bits (375), Expect = 1e-036
Identities = 73/159 (45%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Frame = -1
Query: 590 YAPFSIYKGKAALSLSPVLPTFTKLXXXXXXXXXXXXXMLKFMPAIGERKYDSEKKQLFA 411
Y SIYKGKAAL++ P P F L +L+F PA G R+YD +KQ+F+
Sbjct: 86 YVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFS 145
Query: 410 LSATEVGSLISLGPKDSCELFHDPSMQSSNAGQVRKSLSIKPHAD--GYFISLTVVNNLL 237
LS TE+G+L+SLGP++SCE FHDP + G+VRK L ++P D G F +L+V N LL
Sbjct: 146 LSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLL 205
Query: 236 KTRESFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNKV 120
ES +P+T AEFAV+ +A +F LPH++GW N +
Sbjct: 206 NVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANSI 244
>TAIR9_protein||AT1G14410.1 | Symbols: ATWHY1, PTAC1, WHY1 | WHY1 (WHIRLY 1);
DNA binding / telomeric DNA binding | chr1:4929352-4930810 REVERSE
Length = 264
Score = 149 bits (374), Expect = 2e-036
Identities = 76/180 (42%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Frame = -1
Query: 590 YAPFSIYKGKAALSLSPVLPTFTKLXXXXXXXXXXXXXMLKFMPAIGERKYDSEKKQLFA 411
Y SIYKGKAAL++ P P F L +L+F P+ G R+YD KKQ+F+
Sbjct: 82 YVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFS 141
Query: 410 LSATEVGSLISLGPKDSCELFHDPSMQSSNAGQVRKSLSIKPHAD--GYFISLTVVNNLL 237
LS TE+G+L+SLGP++SCE FHDP S+ G+VRK L ++P D G+F +L+V N L+
Sbjct: 142 LSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLV 201
Query: 236 KTRESFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNKVPRGIEVHKSEMAEPQLLDEWE 57
ES +P+T AEFAV+ +A +F LP+++GW N + + E + A P ++E
Sbjct: 202 NVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANSI-KPEETSRVNNASPNYGGDYE 260
>TAIR9_protein||AT2G02740.1 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3);
DNA binding | chr2:769389-770993 FORWARD
Length = 269
Score = 147 bits (370), Expect = 5e-036
Identities = 74/160 (46%), Positives = 102/160 (63%), Gaps = 3/160 (1%)
Frame = -1
Query: 590 YAPFSIYKGKAALSLSPVLPTFTKLXXXXXXXXXXXXXMLKFMPAIGERKYDSEKKQLFA 411
Y SIYKGKAAL++ P P F L +L+F PA G R+YD +KQ+F+
Sbjct: 86 YVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFS 145
Query: 410 LSATEVGSLISLGPKDSCELFHDP-SMQSSNAGQVRKSLSIKPHAD--GYFISLTVVNNL 240
LS TE+G+L+SLGP++SCE FHDP + S+ G+VRK L ++P D G F +L+V N L
Sbjct: 146 LSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKL 205
Query: 239 LKTRESFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNKV 120
L ES +P+T AEFAV+ +A +F LPH++GW N +
Sbjct: 206 LNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANSI 245
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,781,210,414
Number of Sequences: 33410
Number of Extensions: 1781210414
Number of Successful Extensions: 102579658
Number of sequences better than 0.0: 0
|