BLASTX 7.6.2
Query= RU07222 /QuerySize=428
(427 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type)... 55 2e-008
TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER P... 53 5e-008
TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type)... 52 1e-007
TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 50 4e-007
TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 50 4e-007
TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 50 4e-007
TAIR9_protein||AT5G18550.1 | Symbols: | nucleic acid binding / ... 49 1e-006
TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / ... 47 3e-006
>TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:25361900-25364453 FORWARD
Length = 436
Score = 55 bits (130), Expect = 2e-008
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHLTSSTTS 335
CTHYSRYGICKFGPAC+FDH + T S +S
Sbjct: 386 CTHYSRYGICKFGPACRFDHSIPPTFSPSS 415
>TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA
binding / nuclease/ nucleic acid binding | chr3:614075-615916 FORWARD
Length = 398
Score = 53 bits (126), Expect = 5e-008
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHLTS--STTSGLDHQLPFS-------DLANTKEAGIAR 272
C Y+RYGICKFGP+CKFDHP+ + + +T S D + S ++ T++A A
Sbjct: 326 CVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETDEVVETSTGKSRRLSVSETRQA--AT 383
Query: 271 SRSGTDDTIQLQQ 233
+ SG D TI Q
Sbjct: 384 TSSGKDTTIDNTQ 396
>TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr3:17941402-17943576 FORWARD
Length = 449
Score = 52 bits (123), Expect = 1e-007
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHLTSSTTS 335
CT+YSRYGICKFGPAC+FDH + ST S
Sbjct: 398 CTYYSRYGICKFGPACRFDHSVQPPYSTES 427
>TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 369
Score = 50 bits (119), Expect = 4e-007
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHL 353
C YSRYGICKFGP+CKFDHP+ +
Sbjct: 288 CVFYSRYGICKFGPSCKFDHPMRV 311
>TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403598-5405034
FORWARD
Length = 355
Score = 50 bits (119), Expect = 4e-007
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHL 353
C YSRYGICKFGP+CKFDHP+ +
Sbjct: 274 CVFYSRYGICKFGPSCKFDHPMRV 297
>TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 376
Score = 50 bits (119), Expect = 4e-007
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHL 353
C YSRYGICKFGP+CKFDHP+ +
Sbjct: 295 CVFYSRYGICKFGPSCKFDHPMRV 318
>TAIR9_protein||AT5G18550.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr5:6160515-6162729 FORWARD
Length = 466
Score = 49 bits (115), Expect = 1e-006
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHLTSSTTS 335
CTH++++GICKFGPACKFDH L +S + S
Sbjct: 351 CTHFAQHGICKFGPACKFDHSLGSSSLSYS 380
>TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr3:1947471-1949528 REVERSE
Length = 463
Score = 47 bits (111), Expect = 3e-006
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPL 359
CTH++++GICKFGPACKFDH +
Sbjct: 359 CTHFAQHGICKFGPACKFDHSM 380
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,781,210,414
Number of Sequences: 33410
Number of Extensions: 1781210414
Number of Successful Extensions: 102579658
Number of sequences better than 0.0: 0
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