BLASTX 7.6.2
Query= RU07251 /QuerySize=522
(521 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | PH... 224 3e-059
TAIR9_protein||AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | PH... 224 3e-059
TAIR9_protein||AT4G16250.1 | Symbols: PHYD | PHYD (PHYTOCHROME D... 108 3e-024
TAIR9_protein||AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | PHYB (PH... 103 9e-023
TAIR9_protein||AT5G35840.1 | Symbols: PHYC | PHYC (phytochrome d... 100 6e-022
TAIR9_protein||AT4G18130.1 | Symbols: PHYE | PHYE (PHYTOCHROME D... 94 3e-020
>TAIR9_protein||AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | PHYA (PHYTOCHROME
A); G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr1:3095498-3099216
REVERSE
Length = 1123
Score = 224 bits (570), Expect = 3e-059
Identities = 109/155 (70%), Positives = 137/155 (88%)
Frame = -2
Query: 466 GYLDLEMVEFTLHEVLVASISQVMIKSNAKSIPIVQDANEEIMTETMYGDSLRLQQVLAD 287
G LDLEM EFTL+EVL AS SQVM+KSN KS+ I + EE+M++T+YGDS+RLQQVLAD
Sbjct: 959 GCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLAD 1018
Query: 286 FLSVSVNYMPTGGQLTVAVNLTKDQLGQSVHLVHLELRISHGGSGIPEGLLNQMFGTDGD 107
F+ ++VN+ P+GGQLTV+ +L KDQLG+SVHL +LE+R++H G+GIPE LLNQMFGT+ D
Sbjct: 1019 FMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEED 1078
Query: 106 VSEEGISLLISRKLVKLMNGDVQYLREAGKSTFII 2
VSEEG+SL++SRKLVKLMNGDVQYLR+AGKS+FII
Sbjct: 1079 VSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFII 1113
>TAIR9_protein||AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | PHYA (PHYTOCHROME
A); G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr1:3095498-3098892
REVERSE
Length = 1015
Score = 224 bits (570), Expect = 3e-059
Identities = 109/155 (70%), Positives = 137/155 (88%)
Frame = -2
Query: 466 GYLDLEMVEFTLHEVLVASISQVMIKSNAKSIPIVQDANEEIMTETMYGDSLRLQQVLAD 287
G LDLEM EFTL+EVL AS SQVM+KSN KS+ I + EE+M++T+YGDS+RLQQVLAD
Sbjct: 851 GCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLAD 910
Query: 286 FLSVSVNYMPTGGQLTVAVNLTKDQLGQSVHLVHLELRISHGGSGIPEGLLNQMFGTDGD 107
F+ ++VN+ P+GGQLTV+ +L KDQLG+SVHL +LE+R++H G+GIPE LLNQMFGT+ D
Sbjct: 911 FMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEED 970
Query: 106 VSEEGISLLISRKLVKLMNGDVQYLREAGKSTFII 2
VSEEG+SL++SRKLVKLMNGDVQYLR+AGKS+FII
Sbjct: 971 VSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFII 1005
>TAIR9_protein||AT4G16250.1 | Symbols: PHYD | PHYD (PHYTOCHROME DEFECTIVE D);
G-protein coupled photoreceptor/ red or far-red light photoreceptor/
signal transducer | chr4:9195602-9199486 REVERSE
Length = 1165
Score = 108 bits (268), Expect = 3e-024
Identities = 57/151 (37%), Positives = 89/151 (58%)
Frame = -2
Query: 454 LEMVEFTLHEVLVASISQVMIKSNAKSIPIVQDANEEIMTETMYGDSLRLQQVLADFLSV 275
LE EF + V A +SQVM+ +++ ++++ E+ + +YGD +RLQQVLA+FL
Sbjct: 999 LERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLS 1058
Query: 274 SVNYMPTGGQLTVAVNLTKDQLGQSVHLVHLELRISHGGSGIPEGLLNQMFGTDGDVSEE 95
V Y P G + + + T +Q+ V LE R++ G G+P + MF + S E
Sbjct: 1059 IVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPE 1118
Query: 94 GISLLISRKLVKLMNGDVQYLREAGKSTFII 2
G+ L + RK++KLMNG VQY+RE +S F+I
Sbjct: 1119 GLGLSVCRKILKLMNGGVQYIREFERSYFLI 1149
>TAIR9_protein||AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | PHYB (PHYTOCHROME B);
G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr2:8140079-8144151
FORWARD
Length = 1173
Score = 103 bits (255), Expect = 9e-023
Identities = 53/155 (34%), Positives = 90/155 (58%)
Frame = -2
Query: 466 GYLDLEMVEFTLHEVLVASISQVMIKSNAKSIPIVQDANEEIMTETMYGDSLRLQQVLAD 287
G L+ EF L V+ A +SQ M + + +++D EEI + ++GD +R+QQ+LA+
Sbjct: 991 GSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLLAE 1050
Query: 286 FLSVSVNYMPTGGQLTVAVNLTKDQLGQSVHLVHLELRISHGGSGIPEGLLNQMFGTDGD 107
FL + Y P+ + + ++ Q+ + E R++ G G+P L+ MF +
Sbjct: 1051 FLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPPELVRDMFHSSRW 1110
Query: 106 VSEEGISLLISRKLVKLMNGDVQYLREAGKSTFII 2
S EG+ L + RK++KLMNG+VQY+RE+ +S F+I
Sbjct: 1111 TSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLI 1145
>TAIR9_protein||AT5G35840.1 | Symbols: PHYC | PHYC (phytochrome defective c);
protein histidine kinase | chr5:14008049-14011619 FORWARD
Length = 1112
Score = 100 bits (248), Expect = 6e-022
Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Frame = -2
Query: 466 GYLDLEMVEFTLHEVLVASISQVMIKSNAKSIPIVQDANEEIMTETMYGDSLRLQQVLAD 287
GY++L+ EF L E L A + QVM S + + I D +E+ + +YGD+LRLQQ+L++
Sbjct: 946 GYVELDCSEFGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSE 1005
Query: 286 FLSVSVNYMPTGGQLTVAVNLTK--DQLGQSVHLVHLELRISHGGSGIPEGLLNQMF-GT 116
L S+ + P L V+ + + +G+ + V LE RI H G+PE L+ +MF
Sbjct: 1006 TLLSSIRFTPALRGLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPL 1065
Query: 115 DGDVSEEGISLLISRKLVKLM-NGDVQYLREAGKSTFII 2
S EG+ L I++KLVKLM G ++YLRE+ S F+I
Sbjct: 1066 RKGTSREGLGLHITQKLVKLMERGTLRYLRESEMSAFVI 1104
>TAIR9_protein||AT4G18130.1 | Symbols: PHYE | PHYE (PHYTOCHROME DEFECTIVE E);
G-protein coupled photoreceptor/ protein histidine kinase/ signal
transducer | chr4:10042312-10045948 REVERSE
Length = 1113
Score = 94 bits (233), Expect = 3e-020
Identities = 57/155 (36%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Frame = -2
Query: 466 GYLDLEMVEFTLHEVLVASISQVMIKSNAKSIPIVQDANEEIMTETMYGDSLRLQQVLAD 287
G L LE EF L +L ISQVMI ++ + + EEI T + GD ++LQ +LAD
Sbjct: 934 GKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILAD 993
Query: 286 FLSVSVNYMP-TGGQLTVAVNLTKDQLGQSVHLVHLELRISHGGSGIPEGLLNQMFGT-D 113
L VN+ P + ++++ ++ + +HL+ R+ H G G+P +L+ MF T D
Sbjct: 994 LLRNIVNHAPFPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRD 1053
Query: 112 GDVSEEGISLLISRKLVKLMNGDVQYLREAGKSTF 8
G V+ +G+ L +SRKL++ MNG V Y+RE + F
Sbjct: 1054 GWVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFF 1088
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,781,210,414
Number of Sequences: 33410
Number of Extensions: 1781210414
Number of Successful Extensions: 102579658
Number of sequences better than 0.0: 0
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